Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS019490
(TPMI_594.3_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of ureter ureterolithiasis 993,975
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019490/ScoringFiles/PGS019490.txt.gz
PGS019489
(TPMI_594.3_PRSmix+)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of ureter ureterolithiasis 1,070,068
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019489/ScoringFiles/PGS019489.txt.gz
PGS019488
(TPMI_594.3_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of ureter ureterolithiasis 983,779
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019488/ScoringFiles/PGS019488.txt.gz
PGS019487
(TPMI_594.3_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of ureter ureterolithiasis 46,910
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019487/ScoringFiles/PGS019487.txt.gz
PGS019486
(TPMI_594.3_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of ureter ureterolithiasis 939,826
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019486/ScoringFiles/PGS019486.txt.gz
PGS019485
(TPMI_594.3_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of ureter ureterolithiasis 127,322
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019485/ScoringFiles/PGS019485.txt.gz
PGS019484
(TPMI_594.1_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of kidney kidney volume 993,811
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019484/ScoringFiles/PGS019484.txt.gz
PGS019483
(TPMI_594.1_PRSmix+)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of kidney kidney volume 1,041,148
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019483/ScoringFiles/PGS019483.txt.gz
PGS019482
(TPMI_594.1_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of kidney kidney volume 983,776
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019482/ScoringFiles/PGS019482.txt.gz
PGS019481
(TPMI_594.1_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of kidney kidney volume 55,216
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019481/ScoringFiles/PGS019481.txt.gz
PGS019480
(TPMI_594.1_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of kidney kidney volume 370,680
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019480/ScoringFiles/PGS019480.txt.gz
PGS019479
(TPMI_594.1_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Calculus of kidney kidney volume 2,076
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019479/ScoringFiles/PGS019479.txt.gz
PGS019478
(TPMI_594_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 509,717
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019478/ScoringFiles/PGS019478.txt.gz
PGS019477
(TPMI_594_PRSmix+)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 1,071,465
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019477/ScoringFiles/PGS019477.txt.gz
PGS019476
(TPMI_594_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 983,782
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019476/ScoringFiles/PGS019476.txt.gz
PGS019475
(TPMI_594_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 81,176
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019475/ScoringFiles/PGS019475.txt.gz
PGS019474
(TPMI_594_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 939,830
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019474/ScoringFiles/PGS019474.txt.gz
PGS019473
(TPMI_594_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 2,608
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019473/ScoringFiles/PGS019473.txt.gz
PGS019472
(TPMI_593.2_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Microscopic hematuria Microscopic hematuria 1,005,807
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019472/ScoringFiles/PGS019472.txt.gz
PGS019471
(TPMI_593.2_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Microscopic hematuria Microscopic hematuria 983,778
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019471/ScoringFiles/PGS019471.txt.gz
PGS019470
(TPMI_593.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Microscopic hematuria Microscopic hematuria 40,557
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019470/ScoringFiles/PGS019470.txt.gz
PGS019469
(TPMI_593.2_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Microscopic hematuria Microscopic hematuria 939,824
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019469/ScoringFiles/PGS019469.txt.gz
PGS019468
(TPMI_593.2_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Microscopic hematuria Microscopic hematuria 294,454
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019468/ScoringFiles/PGS019468.txt.gz
PGS019467
(TPMI_593_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Hematuria Hematuria 968,181
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019467/ScoringFiles/PGS019467.txt.gz
PGS019466
(TPMI_593_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Hematuria Hematuria 983,820
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019466/ScoringFiles/PGS019466.txt.gz
PGS019465
(TPMI_593_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Hematuria Hematuria 22,512
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019465/ScoringFiles/PGS019465.txt.gz
PGS019464
(TPMI_593_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Hematuria Hematuria 939,879
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019464/ScoringFiles/PGS019464.txt.gz
PGS019463
(TPMI_593_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Hematuria Hematuria 229,437
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019463/ScoringFiles/PGS019463.txt.gz
PGS019462
(TPMI_591_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 936,271
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019462/ScoringFiles/PGS019462.txt.gz
PGS019461
(TPMI_591_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 983,825
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019461/ScoringFiles/PGS019461.txt.gz
PGS019460
(TPMI_591_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 17,479
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019460/ScoringFiles/PGS019460.txt.gz
PGS019459
(TPMI_591_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 939,883
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019459/ScoringFiles/PGS019459.txt.gz
PGS019458
(TPMI_591_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 206,827
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019458/ScoringFiles/PGS019458.txt.gz
PGS019457
(TPMI_586.2_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cyst of kidney acquired Simple Cyst of Kidney 1,004,389
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019457/ScoringFiles/PGS019457.txt.gz
PGS019456
(TPMI_586.2_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cyst of kidney acquired Simple Cyst of Kidney 983,813
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019456/ScoringFiles/PGS019456.txt.gz
PGS019455
(TPMI_586.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cyst of kidney acquired Simple Cyst of Kidney 548,639
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019455/ScoringFiles/PGS019455.txt.gz
PGS019454
(TPMI_586.2_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cyst of kidney acquired Simple Cyst of Kidney 268,992
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019454/ScoringFiles/PGS019454.txt.gz
PGS019453
(TPMI_586.2_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cyst of kidney acquired Simple Cyst of Kidney 2
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019453/ScoringFiles/PGS019453.txt.gz
PGS019452
(TPMI_586_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other disorders of the kidney and ureters urinary system disorder 929,458
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019452/ScoringFiles/PGS019452.txt.gz
PGS019451
(TPMI_586_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other disorders of the kidney and ureters urinary system disorder 983,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019451/ScoringFiles/PGS019451.txt.gz
PGS019450
(TPMI_586_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other disorders of the kidney and ureters urinary system disorder 30,241
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019450/ScoringFiles/PGS019450.txt.gz
PGS019449
(TPMI_586_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other disorders of the kidney and ureters urinary system disorder 939,872
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019449/ScoringFiles/PGS019449.txt.gz
PGS019448
(TPMI_586_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other disorders of the kidney and ureters urinary system disorder 34,757
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019448/ScoringFiles/PGS019448.txt.gz
PGS019447
(TPMI_585.33_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Chronic Kidney Disease Stage III chronic kidney disease 1,005,374
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019447/ScoringFiles/PGS019447.txt.gz
PGS019446
(TPMI_585.33_PRSmix+)
 PGP000835 |
Chen HH et al. Nature (2025)
 Chronic Kidney Disease Stage III chronic kidney disease 1,071,461
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019446/ScoringFiles/PGS019446.txt.gz
PGS019445
(TPMI_585.33_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Chronic Kidney Disease Stage III chronic kidney disease 983,781
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019445/ScoringFiles/PGS019445.txt.gz
PGS019444
(TPMI_585.33_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Chronic Kidney Disease Stage III chronic kidney disease 45,892
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019444/ScoringFiles/PGS019444.txt.gz
PGS019443
(TPMI_585.33_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Chronic Kidney Disease Stage III chronic kidney disease 939,824
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019443/ScoringFiles/PGS019443.txt.gz
PGS019442
(TPMI_585.33_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Chronic Kidney Disease Stage III chronic kidney disease 245,933
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019442/ScoringFiles/PGS019442.txt.gz
PGS019441
(TPMI_585.32_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 End stage renal disease stage 5 chronic kidney disease 1,019,216
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019441/ScoringFiles/PGS019441.txt.gz
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