Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000295
(VEGF-D)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Vascular endothelial growth factor D (VEGF-D) serum levels blood protein amount 551,905
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000295/ScoringFiles/PGS000295.txt.gz
PGS000294
(VEGF-A)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Vascular endothelial growth factor A (VEGF-A) serum levels blood protein amount 552,070
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000294/ScoringFiles/PGS000294.txt.gz
PGS001179
(GBE_HC711)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Vascular dementia (time-to-event) vascular dementia 7
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001179/ScoringFiles/PGS001179.txt.gz
PGS000938
(GBE_HC990)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Varicose veins of lower extremities (time-to-event) Varicose veins 2,563
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000938/ScoringFiles/PGS000938.txt.gz
PGS000937
(GBE_HC401)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Varicose veins Varicose veins 2,603
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000937/ScoringFiles/PGS000937.txt.gz
PGS001845
(portability-PLR_454)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Varicose veins Varicose veins 15,748
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001845/ScoringFiles/PGS001845.txt.gz
PGS002057
(portability-ldpred2_454)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Varicose veins Varicose veins 760,630
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002057/ScoringFiles/PGS002057.txt.gz
PGS001068
(GBE_INI1548)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Variation in diet diet measurement 1,353
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001068/ScoringFiles/PGS001068.txt.gz
PGS019061
(TPMI_371.1_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uveitis noninfectious or NOS uveitis 20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019061/ScoringFiles/PGS019061.txt.gz
PGS019062
(TPMI_371.1_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uveitis noninfectious or NOS uveitis 939,787
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019062/ScoringFiles/PGS019062.txt.gz
PGS019063
(TPMI_371.1_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uveitis noninfectious or NOS uveitis 323,165
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019063/ScoringFiles/PGS019063.txt.gz
PGS019064
(TPMI_371.1_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uveitis noninfectious or NOS uveitis 983,753
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019064/ScoringFiles/PGS019064.txt.gz
PGS019065
(TPMI_371.1_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uveitis noninfectious or NOS uveitis 21,630
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019065/ScoringFiles/PGS019065.txt.gz
PGS018625
(TPMI_218.1_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uterine leiomyoma uterine corpus leiomyoma 2,512
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018625/ScoringFiles/PGS018625.txt.gz
PGS018626
(TPMI_218.1_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uterine leiomyoma uterine corpus leiomyoma 270,998
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018626/ScoringFiles/PGS018626.txt.gz
PGS018627
(TPMI_218.1_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uterine leiomyoma uterine corpus leiomyoma 34,428
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018627/ScoringFiles/PGS018627.txt.gz
PGS018628
(TPMI_218.1_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uterine leiomyoma uterine corpus leiomyoma 983,780
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018628/ScoringFiles/PGS018628.txt.gz
PGS018629
(TPMI_218.1_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Uterine leiomyoma uterine corpus leiomyoma 976,959
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018629/ScoringFiles/PGS018629.txt.gz
PGS001032
(GBE_HC31)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Uterine fibroids uterine corpus leiomyoma 161
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001032/ScoringFiles/PGS001032.txt.gz
PGS002263
(PRS_UF)
 PGP000291 |
Piekos JA et al. Hum Genet (2022)
 Uterine fibroids uterine corpus leiomyoma 4,457
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002263/ScoringFiles/PGS002263.txt.gz
PGS003381
(best_UCEC)
 PGP000413 |
Namba S et al. Cancer Res (2022)
 Uterine endometrial carcinoma endometrial carcinoma 529,365
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003381/ScoringFiles/PGS003381.txt.gz
PGS001795
(1kgeur_gbmi_leaveUKBBout_UtC_pst_eff_a1_b0.5_phiauto)
 PGP000262 |
Wang Y et al. Cell Genom (2023)
 Uterine cancer uterine carcinoma 911,692
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001795/ScoringFiles/PGS001795.txt.gz
PGS001075
(GBE_INI924)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Usual walking pace physical activity measurement 7,535
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001075/ScoringFiles/PGS001075.txt.gz
PGS001535
(GBE_BIN_FC20002267)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Use of sun/uv protection (Sometimes) sun exposure measurement 309
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001535/ScoringFiles/PGS001535.txt.gz
PGS001993
(portability-PLR_more_sunscreen)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Use of sun/uv protection sun exposure measurement 17,282
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001993/ScoringFiles/PGS001993.txt.gz
PGS002210
(portability-ldpred2_more_sunscreen)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Use of sun/uv protection sun exposure measurement 821,654
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002210/ScoringFiles/PGS002210.txt.gz
PGS000982
(GBE_BIN_FC10002267)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Use of sun / ultraviolet protection (never / rarely) sun exposure measurement 1,141
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000982/ScoringFiles/PGS000982.txt.gz
PGS000980
(GBE_BIN_FC40002267)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Use of sun / ultraviolet protection (always) sun exposure measurement 2,594
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000980/ScoringFiles/PGS000980.txt.gz
PGS019783
(TPMI_947_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urticaria urticaria 806,711
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019783/ScoringFiles/PGS019783.txt.gz
PGS019784
(TPMI_947_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urticaria urticaria 939,787
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019784/ScoringFiles/PGS019784.txt.gz
PGS019785
(TPMI_947_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urticaria urticaria 40,435
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019785/ScoringFiles/PGS019785.txt.gz
PGS019786
(TPMI_947_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urticaria urticaria 983,749
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019786/ScoringFiles/PGS019786.txt.gz
PGS019787
(TPMI_947_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urticaria urticaria 973,975
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019787/ScoringFiles/PGS019787.txt.gz
PGS000293
(U-PAR)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Urokinase plasminogen activator surface receptor (U-PAR) serum levels blood protein amount 552,048
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000293/ScoringFiles/PGS000293.txt.gz
PGS000861
(UACR)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Urine Albumin-to-Creatinine ratio urinary albumin to creatinine ratio 93
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000861/ScoringFiles/PGS000861.txt.gz
PGS019458
(TPMI_591_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 206,827
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019458/ScoringFiles/PGS019458.txt.gz
PGS019459
(TPMI_591_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 939,883
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019459/ScoringFiles/PGS019459.txt.gz
PGS019460
(TPMI_591_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 17,479
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019460/ScoringFiles/PGS019460.txt.gz
PGS019461
(TPMI_591_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 983,825
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019461/ScoringFiles/PGS019461.txt.gz
PGS019462
(TPMI_591_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 936,271
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019462/ScoringFiles/PGS019462.txt.gz
PGS001864
(portability-PLR_594)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Urinary calculus urolithiasis 5,599
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001864/ScoringFiles/PGS001864.txt.gz
PGS002075
(portability-ldpred2_594)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Urinary calculus urolithiasis 731,196
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002075/ScoringFiles/PGS002075.txt.gz
PGS019473
(TPMI_594_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 2,608
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019473/ScoringFiles/PGS019473.txt.gz
PGS019474
(TPMI_594_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 939,830
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019474/ScoringFiles/PGS019474.txt.gz
PGS019475
(TPMI_594_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 81,176
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019475/ScoringFiles/PGS019475.txt.gz
PGS019476
(TPMI_594_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 983,782
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019476/ScoringFiles/PGS019476.txt.gz
PGS019477
(TPMI_594_PRSmix+)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 1,071,465
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019477/ScoringFiles/PGS019477.txt.gz
PGS019478
(TPMI_594_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary calculus urinary volume 509,717
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019478/ScoringFiles/PGS019478.txt.gz
PGS004897
(UACR)
 PGP000623 |
Cañadas-Garre M et al. Int J Mol Sci (2023)
 Urinary albumin-to-creatinine ratio urinary albumin to creatinine ratio 28
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004897/ScoringFiles/PGS004897.txt.gz
PGS000822
(GRS_UACR)
 PGP000206 |
Teumer A et al. Nat Commun (2019)
 Urinary albumin to creatinine ratio urinary albumin to creatinine ratio 59
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000822/ScoringFiles/PGS000822.txt.gz
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