Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001520
(GBE_INI4198)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Position of the pulse wave peak arterial stiffness measurement 1,358
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001520/ScoringFiles/PGS001520.txt.gz
PGS019617
(TPMI_696.41_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Psoriasis vulgaris psoriasis vulgaris 1,357
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019617/ScoringFiles/PGS019617.txt.gz
PGS001068
(GBE_INI1548)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Variation in diet diet measurement 1,353
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001068/ScoringFiles/PGS001068.txt.gz
PGS001463
(GBE_INI25383)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in fornix cres+stria terminalis on FA skeleton (L) neuroimaging measurement,
brain volume		 1,353
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001463/ScoringFiles/PGS001463.txt.gz
PGS001771
(GBE_INI25701)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA OD in tract superior thalamic radiation (R) neuroimaging measurement,
brain volume		 1,352
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001771/ScoringFiles/PGS001771.txt.gz
PGS002563
(disease_PSORIASIS.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Psoriasis psoriasis 1,348
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002563/ScoringFiles/PGS002563.txt.gz
PGS018665
(TPMI_242_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Thyrotoxicosis with or without goiter thyrotoxicosis 1,343
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018665/ScoringFiles/PGS018665.txt.gz
PGS001564
(GBE_INI25887)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Hippocampus (R) neuroimaging measurement,
grey matter volume measurement		 1,336
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001564/ScoringFiles/PGS001564.txt.gz
PGS000592
(PRSWEB_PHECODE185_UKBB-SAIGE-HRC-X185_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 1,334
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000592/ScoringFiles/PGS000592.txt.gz
PGS001637
(GBE_INI25011)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of thalamus (L) neuroimaging measurement,
thalamus volume		 1,328
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001637/ScoringFiles/PGS001637.txt.gz
PGS001640
(GBE_INI25008)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of white matter neuroimaging measurement,
white matter volume measurement		 1,328
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001640/ScoringFiles/PGS001640.txt.gz
PGS001073
(GBE_INI874)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Duration of walks physical activity measurement 1,323
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001073/ScoringFiles/PGS001073.txt.gz
PGS001743
(GBE_INI25649)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L3 in tract uncinate fasciculus (R) neuroimaging measurement,
brain volume		 1,320
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001743/ScoringFiles/PGS001743.txt.gz
PGS001462
(GBE_INI25376)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in external capsule on FA skeleton (R) neuroimaging measurement,
brain volume		 1,316
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001462/ScoringFiles/PGS001462.txt.gz
PGS001587
(GBE_INI25868)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Planum Polare (L) neuroimaging measurement,
grey matter volume measurement		 1,316
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001587/ScoringFiles/PGS001587.txt.gz
PGS001453
(GBE_INI25360)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in anterior limb of internal capsule on FA skeleton (R) neuroimaging measurement,
brain volume		 1,308
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001453/ScoringFiles/PGS001453.txt.gz
PGS001813
(portability-PLR_218)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Benign neoplasm of uterus uterine benign neoplasm 1,308
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001813/ScoringFiles/PGS001813.txt.gz
PGS019955
(PRS1308_AR)
 PGP000845 |
Cao R et al. PLoS One (2024)
 Acute rejection after kidney transplantation renal transplant outcome measurement 1,308
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019955/ScoringFiles/PGS019955.txt.gz
PGS001642
(GBE_INI25000)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volumetric scaling from T1 head image to standard space neuroimaging measurement,
brain volume		 1,304
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001642/ScoringFiles/PGS001642.txt.gz
PGS019656
(TPMI_714_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Rheumatoid arthritis and other inflammatory polyarthropathies rheumatoid arthritis 1,304
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019656/ScoringFiles/PGS019656.txt.gz
PGS000585
(PRSWEB_PHECODE185_Pca-PRACTICAL_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 1,301
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000585/ScoringFiles/PGS000585.txt.gz
PGS001041
(GBE_cancer1003)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Skin cancer skin carcinoma 1,298
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001041/ScoringFiles/PGS001041.txt.gz
PGS001769
(GBE_INI25698)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA OD in tract superior longitudinal fasciculus (L) neuroimaging measurement,
brain volume		 1,298
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001769/ScoringFiles/PGS001769.txt.gz
PGS001418
(GBE_INI25071)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in cerebral peduncle on FA skeleton (L) neuroimaging measurement,
brain volume		 1,295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001418/ScoringFiles/PGS001418.txt.gz
PGS019790
(TPMI_T-BIL_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Total bilirubin bilirubin measurement 1,292
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019790/ScoringFiles/PGS019790.txt.gz
PGS001059
(GBE_BIN_FC50001468)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Cereal consumption (other) diet measurement 1,286
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001059/ScoringFiles/PGS001059.txt.gz
PGS001443
(GBE_INI25099)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in superior fronto-occipital fasciculus on FA skeleton (L) neuroimaging measurement,
brain volume		 1,286
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001443/ScoringFiles/PGS001443.txt.gz
PGS001416
(GBE_INI25072)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in anterior limb of internal capsule on FA skeleton (R) neuroimaging measurement,
brain volume		 1,280
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001416/ScoringFiles/PGS001416.txt.gz
PGS001657
(GBE_INI25508)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA FA in tract posterior thalamic radiation (R) neuroimaging measurement,
brain volume		 1,279
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001657/ScoringFiles/PGS001657.txt.gz
PGS001397
(GBE_INI971)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Frequency of walking for pleasure in last 4 weeks physical activity measurement 1,276
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001397/ScoringFiles/PGS001397.txt.gz
PGS001274
(GBE_HC1268)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Osteoporosis without pathological fracture (time-to-event) osteoporosis 1,270
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001274/ScoringFiles/PGS001274.txt.gz
PGS001680
(GBE_INI25669)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract posterior thalamic radiation (L) neuroimaging measurement,
brain volume		 1,264
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001680/ScoringFiles/PGS001680.txt.gz
PGS001468
(GBE_INI25354)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in inferior cerebellar peduncle on FA skeleton (R) neuroimaging measurement,
brain volume		 1,262
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001468/ScoringFiles/PGS001468.txt.gz
PGS001650
(GBE_INI25498)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA FA in tract forceps major neuroimaging measurement,
brain volume		 1,261
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001650/ScoringFiles/PGS001650.txt.gz
PGS001584
(GBE_INI25849)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Parahippocampal Gyrus, anterior division (R) neuroimaging measurement,
grey matter volume measurement		 1,250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001584/ScoringFiles/PGS001584.txt.gz
PGS001572
(GBE_INI25915)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in IX Cerebellum (L) neuroimaging measurement,
grey matter volume measurement		 1,245
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001572/ScoringFiles/PGS001572.txt.gz
PGS001442
(GBE_INI25080)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in superior corona radiata on FA skeleton (R) neuroimaging measurement,
brain volume		 1,238
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001442/ScoringFiles/PGS001442.txt.gz
PGS002595
(lung_FVCzSMOKE.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 1,235
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002595/ScoringFiles/PGS002595.txt.gz
PGS001420
(GBE_INI25090)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in cingulum cingulate gyrus on FA skeleton (R) neuroimaging measurement,
brain volume		 1,224
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001420/ScoringFiles/PGS001420.txt.gz
PGS019623
(TPMI_696.42_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Psoriatic arthropathy psoriatic arthritis 1,224
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019623/ScoringFiles/PGS019623.txt.gz
PGS019645
(TPMI_709.2_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Sicca syndrome Sjogren syndrome 1,224
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019645/ScoringFiles/PGS019645.txt.gz
PGS001338
(GBE_HC1322)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Hyperplasia of prostate (time-to-event) benign prostatic hyperplasia 1,223
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001338/ScoringFiles/PGS001338.txt.gz
PGS002535
(disease_CARDIOVASCULAR.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Cardiovascular disease cardiovascular disorder 1,218
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002535/ScoringFiles/PGS002535.txt.gz
PGS001302
(GBE_HC25)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Cataract cataract 1,214
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001302/ScoringFiles/PGS001302.txt.gz
PGS003215
(ExPRSweb_SleepApnea_finngen-R4-G6-SLEEPAPNO_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Sleep apnea sleep apnea syndrome 1,209
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003215/ScoringFiles/PGS003215.txt.gz
PGS001447
(GBE_INI25103)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in tapetum on FA skeleton (L) neuroimaging measurement,
brain volume		 1,202
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001447/ScoringFiles/PGS001447.txt.gz
PGS001606
(GBE_INI25796)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Temporal Pole (L) neuroimaging measurement,
grey matter volume measurement		 1,200
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001606/ScoringFiles/PGS001606.txt.gz
PGS001539
(GBE_INI25025)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of brain stem + 4th ventricle neuroimaging measurement,
brain stem volume,
fourth ventricle volume		 1,183
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001539/ScoringFiles/PGS001539.txt.gz
PGS002623
(biochemistry_VitaminD.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D level 1,183
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002623/ScoringFiles/PGS002623.txt.gz
PGS001425
(GBE_INI25094)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in fornix cres+stria terminalis on FA skeleton (R) neuroimaging measurement,
brain volume		 1,174
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001425/ScoringFiles/PGS001425.txt.gz
Showing 5101 to 5150 of 6982 rows