Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001617
(GBE_INI25907)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Vermis VIIb Cerebellum neuroimaging measurement,
grey matter volume measurement		 718
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001617/ScoringFiles/PGS001617.txt.gz
PGS004167
(bc_2)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Breast cancer breast carcinoma 717
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004167/ScoringFiles/PGS004167.txt.gz
PGS019071
(TPMI_379.5_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Disorders of iris and ciliary body eye disorder 716
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019071/ScoringFiles/PGS019071.txt.gz
PGS001467
(GBE_INI25355)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in inferior cerebellar peduncle on FA skeleton (L) neuroimaging measurement,
brain volume		 711
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001467/ScoringFiles/PGS001467.txt.gz
PGS001723
(GBE_INI25610)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L2 in tract inferior longitudinal fasciculus (L) neuroimaging measurement,
brain volume		 711
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001723/ScoringFiles/PGS001723.txt.gz
PGS001503
(GBE_INI25470)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in sagittal stratum on FA skeleton (R) neuroimaging measurement,
brain volume		 709
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001503/ScoringFiles/PGS001503.txt.gz
PGS001654
(GBE_INI25502)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA FA in tract inferior longitudinal fasciculus (L) neuroimaging measurement,
brain volume		 709
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001654/ScoringFiles/PGS001654.txt.gz
PGS001727
(GBE_INI25621)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L2 in tract uncinate fasciculus (L) neuroimaging measurement,
brain volume		 709
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001727/ScoringFiles/PGS001727.txt.gz
PGS001728
(GBE_INI25622)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L2 in tract uncinate fasciculus (R) neuroimaging measurement,
brain volume		 706
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001728/ScoringFiles/PGS001728.txt.gz
PGS001487
(GBE_INI25386)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in superior fronto-occipital fasciculus on FA skeleton (R) neuroimaging measurement,
brain volume		 703
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001487/ScoringFiles/PGS001487.txt.gz
PGS001648
(GBE_INI25493)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA FA in tract cingulate gyrus part of cingulum (R) neuroimaging measurement,
brain volume		 702
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001648/ScoringFiles/PGS001648.txt.gz
PGS001751
(GBE_INI25528)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MD in tract inferior fronto-occipital fasciculus (R) neuroimaging measurement,
brain volume		 702
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001751/ScoringFiles/PGS001751.txt.gz
PGS000184
(pct)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Platelet crit platelet crit 700
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000184/ScoringFiles/PGS000184.txt.gz
PGS004292
(GenoBoost_atrial_fibrillation_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Atrial fibrillation atrial fibrillation 700
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004292/ScoringFiles/PGS004292.txt.gz
PGS004304
(GenoBoost_colorectal_cancer_4)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 700
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004304/ScoringFiles/PGS004304.txt.gz
PGS001143
(GBE_INI25867)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Parietal Operculum Cortex (R) grey matter volume measurement 699
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001143/ScoringFiles/PGS001143.txt.gz
PGS001567
(GBE_INI25791)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Inferior Frontal Gyrus, pars triangularis (R) neuroimaging measurement,
grey matter volume measurement		 697
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001567/ScoringFiles/PGS001567.txt.gz
PGS001698
(GBE_INI25725)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ISOVF in tract superior longitudinal fasciculus (L) neuroimaging measurement,
brain volume		 695
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001698/ScoringFiles/PGS001698.txt.gz
PGS001626
(GBE_INI25911)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in VIIIa Cerebellum (R) neuroimaging measurement,
grey matter volume measurement		 694
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001626/ScoringFiles/PGS001626.txt.gz
PGS001519
(GBE_INI4199)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Position of pulse wave notch arterial stiffness measurement 693
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001519/ScoringFiles/PGS001519.txt.gz
PGS001721
(GBE_INI25608)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L2 in tract inferior fronto-occipital fasciculus (L) neuroimaging measurement,
brain volume		 691
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001721/ScoringFiles/PGS001721.txt.gz
PGS003216
(ExPRSweb_SleepApnea_finngen-R4-G6-SLEEPAPNO_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Sleep apnea sleep apnea syndrome 688
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003216/ScoringFiles/PGS003216.txt.gz
PGS001048
(GBE_HC1576)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 NSTEMI (algorithmically-defined) Non-ST Elevation Myocardial Infarction 687
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001048/ScoringFiles/PGS001048.txt.gz
PGS001612
(GBE_INI25890)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Ventral Striatum (L) neuroimaging measurement,
grey matter volume measurement		 687
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001612/ScoringFiles/PGS001612.txt.gz
PGS000176
(mcv)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean corpuscular volume erythrocyte volume 685
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000176/ScoringFiles/PGS000176.txt.gz
PGS001726
(GBE_INI25619)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L2 in tract superior thalamic radiation (L) neuroimaging measurement,
brain volume		 683
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001726/ScoringFiles/PGS001726.txt.gz
PGS000187
(rbc)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Red blood cell count erythrocyte count 678
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000187/ScoringFiles/PGS000187.txt.gz
PGS001624
(GBE_INI25908)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in VIIb Cerebellum (R) neuroimaging measurement,
grey matter volume measurement		 673
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001624/ScoringFiles/PGS001624.txt.gz
PGS002573
(disease_T2D.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 673
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002573/ScoringFiles/PGS002573.txt.gz
PGS003382
(best_SKCM)
 PGP000413 |
Namba S et al. Cancer Res (2022)
 Skin cutaneous melanoma cutaneous melanoma 672
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003382/ScoringFiles/PGS003382.txt.gz
PGS018734
(TPMI_250.6_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 669
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018734/ScoringFiles/PGS018734.txt.gz
PGS002591
(disease_ALLERGY_ECZEMA_DIAGNOSED.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Eczema Eczematoid dermatitis 667
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002591/ScoringFiles/PGS002591.txt.gz
PGS001504
(GBE_INI25452)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in superior cerebellar peduncle on FA skeleton (R) neuroimaging measurement,
brain volume		 666
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001504/ScoringFiles/PGS001504.txt.gz
PGS001374
(GBE_INI2897)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Age stopped smoking smoking cessation 663
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001374/ScoringFiles/PGS001374.txt.gz
PGS001675
(GBE_INI25667)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract medial lemniscus (L) neuroimaging measurement,
brain volume		 663
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001675/ScoringFiles/PGS001675.txt.gz
PGS001091
(GBE_BIN2020)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Loneliness loneliness measurement 660
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001091/ScoringFiles/PGS001091.txt.gz
PGS001398
(GBE_QT_FC1004570)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Friendship satisfaction friendship satisfaction measurement 659
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001398/ScoringFiles/PGS001398.txt.gz
PGS002566
(disease_RESPIRATORY_ENT.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Respiratory and ear-nose-throat diseases respiratory system disorder 658
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002566/ScoringFiles/PGS002566.txt.gz
PGS000628
(PRSWEB_PHECODE193_C3-THYROID-GLAND_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Thyroid cancer thyroid gland carcinoma 656
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000628/ScoringFiles/PGS000628.txt.gz
PGS001322
(GBE_HC276)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Glaucoma glaucoma 655
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001322/ScoringFiles/PGS001322.txt.gz
PGS000179
(mpv)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean platelet volume platelet volume 654
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000179/ScoringFiles/PGS000179.txt.gz
PGS001823
(portability-PLR_275.1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Disorders of iron metabolism iron metabolism disease 654
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001823/ScoringFiles/PGS001823.txt.gz
PGS001552
(GBE_INI25841)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Cingulate Gyrus, posterior division (R) neuroimaging measurement,
grey matter volume measurement		 652
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001552/ScoringFiles/PGS001552.txt.gz
PGS001623
(GBE_INI25906)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in VIIb Cerebellum (L) neuroimaging measurement,
grey matter volume measurement		 649
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001623/ScoringFiles/PGS001623.txt.gz
PGS001537
(GBE_INI25023)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of accumbens (L) neuroimaging measurement,
nucleus accumbens volume		 647
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001537/ScoringFiles/PGS001537.txt.gz
PGS001538
(GBE_INI25024)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of accumbens (R) neuroimaging measurement,
nucleus accumbens volume		 643
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001538/ScoringFiles/PGS001538.txt.gz
PGS002612
(disease_PSORIASIS.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Psoriasis psoriasis 643
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002612/ScoringFiles/PGS002612.txt.gz
PGS001492
(GBE_INI25388)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in uncinate fasciculus on FA skeleton (R) neuroimaging measurement,
brain volume		 641
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001492/ScoringFiles/PGS001492.txt.gz
PGS001906
(portability-PLR_ECG_QTC_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 QTc interval QT interval 641
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001906/ScoringFiles/PGS001906.txt.gz
PGS003256
(ExPRSweb_Creatine_eGFRcrea-overall-EA_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 641
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003256/ScoringFiles/PGS003256.txt.gz
Showing 5351 to 5400 of 6972 rows