Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003492
(cont-decay-apoB)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Apolipoprotein B apolipoprotein B measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003492/ScoringFiles/PGS003492.txt.gz
PGS000672
(snpnet.Apolipoprotein_B_adjstatins)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Apolipoprotein B [g/L] (statin adjusted) apolipoprotein B measurement 18,666
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000672/ScoringFiles/PGS000672.txt.gz - Check Terms/Licenses
PGS001786
(1kgeur_gbmi_leaveUKBBout_Appendectomy_pst_eff_a1_b0.5_phiauto)
 PGP000262 |
Wang Y et al. Cell Genom (2023)
 Appendectomy appendectomy 899,660
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001786/ScoringFiles/PGS001786.txt.gz
PGS001853
(portability-PLR_540)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Appendiceal conditions disorder of appendix 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001853/ScoringFiles/PGS001853.txt.gz
PGS002064
(portability-ldpred2_540)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Appendiceal conditions disorder of appendix 497,422
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002064/ScoringFiles/PGS002064.txt.gz
PGS004876
(INTERVENE_MegaPRS_Appendicitis)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Appendicitis appendicitis 601,835
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004876/ScoringFiles/PGS004876.txt.gz
PGS001165
(GBE_INI23125)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat free mass (L) lean body mass 30,360
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001165/ScoringFiles/PGS001165.txt.gz
PGS003920
(INI23125)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat-free mass (L) lean body mass 39,276
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003920/ScoringFiles/PGS003920.txt.gz
PGS004399
(X23125.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat-free mass (left) lean body mass 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004399/ScoringFiles/PGS004399.txt.gz
PGS001146
(GBE_INI23121)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat-free mass (R) fat pad mass 29,063
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001146/ScoringFiles/PGS001146.txt.gz
PGS003917
(INI23121)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat-free mass (R) lean body mass 38,650
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003917/ScoringFiles/PGS003917.txt.gz
PGS004395
(X23121.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat-free mass (right) lean body mass 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004395/ScoringFiles/PGS004395.txt.gz
PGS001144
(GBE_INI23124)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat mass (L) fat pad mass 23,676
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001144/ScoringFiles/PGS001144.txt.gz
PGS003919
(INI23124)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat mass (L) fat pad mass 29,392
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003919/ScoringFiles/PGS003919.txt.gz
PGS004398
(X23124.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat mass (left) fat pad mass 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004398/ScoringFiles/PGS004398.txt.gz
PGS001145
(GBE_INI23120)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat mass (R) fat pad mass 23,528
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001145/ScoringFiles/PGS001145.txt.gz
PGS003916
(INI23120)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat mass (R) fat pad mass 29,790
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003916/ScoringFiles/PGS003916.txt.gz
PGS004394
(X23120.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat mass (right) fat pad mass 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004394/ScoringFiles/PGS004394.txt.gz
PGS003918
(INI23123)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat percentage (L) body fat percentage 32,450
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003918/ScoringFiles/PGS003918.txt.gz
PGS004397
(X23123.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat percentage (left) body fat percentage 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004397/ScoringFiles/PGS004397.txt.gz
PGS001106
(GBE_INI23119)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arm fat percentage (R) body fat percentage 23,943
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001106/ScoringFiles/PGS001106.txt.gz
PGS003915
(INI23119)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Arm fat percentage (R) body fat percentage 32,448
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003915/ScoringFiles/PGS003915.txt.gz
PGS004393
(X23119.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm fat percentage (right) body fat percentage 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004393/ScoringFiles/PGS004393.txt.gz
PGS004400
(X23126.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm predicted mass (left) body weights and measures 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004400/ScoringFiles/PGS004400.txt.gz
PGS004396
(X23122.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Arm predicted mass (right) body weights and measures 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004396/ScoringFiles/PGS004396.txt.gz
PGS001135
(GBE_HC78)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arthritis (nos) arthritis 1,028
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001135/ScoringFiles/PGS001135.txt.gz
PGS002236
(PRS_AsAoD)
 PGP000268 |
Tcheandjieu C et al. Nat Genet (2022)
 Ascending aorta diameter (MRI-derived) aortic measurement 92,299
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002236/ScoringFiles/PGS002236.txt.gz
PGS004927
(score_resint_max_aa_shortaxis_cm)
 PGP000663 |
Pirruccello JP et al. Eur Heart J (2024)
 Ascending aortic diameter aortic measurement 1,111,632
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004927/ScoringFiles/PGS004927.txt.gz
PGS002267
(PRS89_AA)
 PGP000296 |
Pirruccello JP et al. Nat Genet (2021)
 Ascending thoracic aortic diameter cardiovascular disease biomarker measurement,
aortic measurement		 89
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002267/ScoringFiles/PGS002267.txt.gz
PGS001941
(portability-PLR_log_AST)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 33,498
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001941/ScoringFiles/PGS001941.txt.gz
PGS002159
(portability-ldpred2_log_AST)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 716,914
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002159/ScoringFiles/PGS002159.txt.gz
PGS003343
(CVGRS_AST)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 54
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003343/ScoringFiles/PGS003343.txt.gz
PGS003352
(ALLGRS_AST)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Aspartate aminotransferase level aspartate aminotransferase measurement 56
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003352/ScoringFiles/PGS003352.txt.gz
PGS003523
(cont-decay-log_AST)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Aspartate aminotransferase level aspartate aminotransferase measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003523/ScoringFiles/PGS003523.txt.gz
PGS004719
(AST_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 519,241
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004719/ScoringFiles/PGS004719.txt.gz
PGS004720
(AST_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 1,000,300
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004720/ScoringFiles/PGS004720.txt.gz
PGS004721
(AST_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 1,196,185
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004721/ScoringFiles/PGS004721.txt.gz
PGS004722
(AST_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 868,009
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004722/ScoringFiles/PGS004722.txt.gz
PGS004330
(X30650.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Aspartate aminotransferase (U/L) aspartate aminotransferase measurement 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004330/ScoringFiles/PGS004330.txt.gz
PGS000673
(snpnet.Aspartate_aminotransferase)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Aspartate aminotransferase [U/L] aspartate aminotransferase measurement 12,829
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000673/ScoringFiles/PGS000673.txt.gz - Check Terms/Licenses
PGS001112
(GBE_BIN_FC1006154)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Aspirin aspirin use measurement 499
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001112/ScoringFiles/PGS001112.txt.gz
PGS001113
(GBE_BIN_FC7006154)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Aspirin use self-reported aspirin use measurement 790
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001113/ScoringFiles/PGS001113.txt.gz
PGS000037
(PGS_AST)
 PGP000025 |
Belsky DW et al. Lancet Respir Med (2013)
 Asthma asthma 15
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000037/ScoringFiles/PGS000037.txt.gz
PGS000799
(GRSw_TAGC)
 PGP000189 |
Dijk FN et al. J Allergy Clin Immunol (2019)
 Asthma asthma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000799/ScoringFiles/PGS000799.txt.gz
PGS001341
(GBE_HC382)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Asthma asthma 6,430
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001341/ScoringFiles/PGS001341.txt.gz
PGS001782
(1kgeur_gbmi_Asthma_pst_eff_a1_b0.5_phiauto)
 PGP000262 |
Wang Y et al. Cell Genom (2023)
 Asthma asthma 884,043
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001782/ScoringFiles/PGS001782.txt.gz
PGS001787
(1kgeur_gbmi_leaveUKBBout_Asthma_pst_eff_a1_b0.5_phiauto)
 PGP000262 |
Wang Y et al. Cell Genom (2023)
 Asthma asthma 909,990
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001787/ScoringFiles/PGS001787.txt.gz
PGS001849
(portability-PLR_495)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Asthma asthma 22,679
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001849/ScoringFiles/PGS001849.txt.gz
PGS002061
(portability-ldpred2_495)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Asthma asthma 793,375
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002061/ScoringFiles/PGS002061.txt.gz
PGS002311
(disease_ASTHMA_DIAGNOSED.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Asthma asthma 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002311/ScoringFiles/PGS002311.txt.gz
Showing 251 to 300 of 5134 rows