Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS019548
(TPMI_613.7_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Other signs and symptoms in breast sign or symptom 939,891
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019548/ScoringFiles/PGS019548.txt.gz
PGS019547
(TPMI_613.7_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Other signs and symptoms in breast sign or symptom 2
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019547/ScoringFiles/PGS019547.txt.gz
PGS019546
(TPMI_613_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 949,941
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019546/ScoringFiles/PGS019546.txt.gz
PGS019545
(TPMI_613_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 983,824
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019545/ScoringFiles/PGS019545.txt.gz
PGS019544
(TPMI_613_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 467,665
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019544/ScoringFiles/PGS019544.txt.gz
PGS019543
(TPMI_613_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 333,845
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019543/ScoringFiles/PGS019543.txt.gz
PGS019542
(TPMI_613_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonmalignant breast conditions breast disorder 2,767
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019542/ScoringFiles/PGS019542.txt.gz
PGS019541
(TPMI_611.3_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 966,845
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019541/ScoringFiles/PGS019541.txt.gz
PGS019540
(TPMI_611.3_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 983,818
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019540/ScoringFiles/PGS019540.txt.gz
PGS019539
(TPMI_611.3_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 12,220
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019539/ScoringFiles/PGS019539.txt.gz
PGS019538
(TPMI_611.3_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 939,878
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019538/ScoringFiles/PGS019538.txt.gz
PGS019537
(TPMI_611.3_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Lump or mass in breast breast neoplasm 7,018
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019537/ScoringFiles/PGS019537.txt.gz
PGS019536
(TPMI_610.1_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 994,396
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019536/ScoringFiles/PGS019536.txt.gz
PGS019535
(TPMI_610.1_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 983,768
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019535/ScoringFiles/PGS019535.txt.gz
PGS019534
(TPMI_610.1_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 531,434
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019534/ScoringFiles/PGS019534.txt.gz
PGS019533
(TPMI_610.1_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 939,813
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019533/ScoringFiles/PGS019533.txt.gz
PGS019532
(TPMI_610.1_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Cystic mastopathy breast fibrocystic disease 1
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019532/ScoringFiles/PGS019532.txt.gz
PGS019531
(TPMI_604_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 986,862
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019531/ScoringFiles/PGS019531.txt.gz
PGS019530
(TPMI_604_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 983,731
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019530/ScoringFiles/PGS019530.txt.gz
PGS019529
(TPMI_604_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 584,567
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019529/ScoringFiles/PGS019529.txt.gz
PGS019528
(TPMI_604_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 322,262
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019528/ScoringFiles/PGS019528.txt.gz
PGS019527
(TPMI_604_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Disorders of penis penile disorder 56,123
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019527/ScoringFiles/PGS019527.txt.gz
PGS019526
(TPMI_600_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 936,087
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019526/ScoringFiles/PGS019526.txt.gz
PGS019525
(TPMI_600_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 983,774
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019525/ScoringFiles/PGS019525.txt.gz
PGS019524
(TPMI_600_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 23,988
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019524/ScoringFiles/PGS019524.txt.gz
PGS019523
(TPMI_600_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 939,823
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019523/ScoringFiles/PGS019523.txt.gz
PGS019522
(TPMI_600_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Hyperplasia of prostate benign prostatic hyperplasia 152,433
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019522/ScoringFiles/PGS019522.txt.gz
PGS019521
(TPMI_599.5_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 980,241
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019521/ScoringFiles/PGS019521.txt.gz
PGS019520
(TPMI_599.5_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 983,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019520/ScoringFiles/PGS019520.txt.gz
PGS019519
(TPMI_599.5_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 544,657
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019519/ScoringFiles/PGS019519.txt.gz
PGS019518
(TPMI_599.5_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 939,875
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019518/ScoringFiles/PGS019518.txt.gz
PGS019517
(TPMI_599.5_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Frequency of urination and polyuria Polyuria 206,142
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019517/ScoringFiles/PGS019517.txt.gz
PGS019516
(TPMI_599.2_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 992,540
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019516/ScoringFiles/PGS019516.txt.gz
PGS019515
(TPMI_599.2_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 983,821
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019515/ScoringFiles/PGS019515.txt.gz
PGS019514
(TPMI_599.2_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 555,975
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019514/ScoringFiles/PGS019514.txt.gz
PGS019513
(TPMI_599.2_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 105,295
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019513/ScoringFiles/PGS019513.txt.gz
PGS019512
(TPMI_599.2_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Retention of urine Urinary retention 234
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019512/ScoringFiles/PGS019512.txt.gz
PGS019511
(TPMI_598.9_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 905,790
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019511/ScoringFiles/PGS019511.txt.gz
PGS019510
(TPMI_598.9_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 983,789
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019510/ScoringFiles/PGS019510.txt.gz
PGS019509
(TPMI_598.9_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 22,276
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019509/ScoringFiles/PGS019509.txt.gz
PGS019508
(TPMI_598.9_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 939,829
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019508/ScoringFiles/PGS019508.txt.gz
PGS019507
(TPMI_598.9_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Other nonspecific findings on examination of urine abnormal result of function studies 712,658
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019507/ScoringFiles/PGS019507.txt.gz
PGS019506
(TPMI_598_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 908,372
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019506/ScoringFiles/PGS019506.txt.gz
PGS019505
(TPMI_598_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 983,833
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019505/ScoringFiles/PGS019505.txt.gz
PGS019504
(TPMI_598_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 15,498
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019504/ScoringFiles/PGS019504.txt.gz
PGS019503
(TPMI_598_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 939,897
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019503/ScoringFiles/PGS019503.txt.gz
PGS019502
(TPMI_598_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Abnormal findings on examination of urine urinary system disorder 694,136
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019502/ScoringFiles/PGS019502.txt.gz
PGS019501
(TPMI_597_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of urethra and urinary tract urinary system disorder 875,558
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019501/ScoringFiles/PGS019501.txt.gz
PGS019500
(TPMI_597_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of urethra and urinary tract urinary system disorder 983,826
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019500/ScoringFiles/PGS019500.txt.gz
PGS019499
(TPMI_597_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of urethra and urinary tract urinary system disorder 513,693
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019499/ScoringFiles/PGS019499.txt.gz