Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001887
(portability-PLR_ankle_spacing)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Ankle spacing width anthropometric measurement 89,827
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001887/ScoringFiles/PGS001887.txt.gz
PGS001888
(portability-PLR_apoA)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Apolipoprotein A apolipoprotein A 1 measurement 74,596
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001888/ScoringFiles/PGS001888.txt.gz
PGS001889
(portability-PLR_apoB)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Apolipoprotein B apolipoprotein B measurement 16,952
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001889/ScoringFiles/PGS001889.txt.gz
PGS001890
(portability-PLR_avMSE)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 avMSE visual acuity measurement 44,864
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001890/ScoringFiles/PGS001890.txt.gz
PGS001891
(portability-PLR_bad_hearing)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Hearing difficulty/problems hearing disorder 19,960
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001891/ScoringFiles/PGS001891.txt.gz
PGS001892
(portability-PLR_birth_weight)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Birth weight birth weight 35,060
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001892/ScoringFiles/PGS001892.txt.gz
PGS001893
(portability-PLR_calcium)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Calcium calcium measurement 48,395
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001893/ScoringFiles/PGS001893.txt.gz
PGS001894
(portability-PLR_celiac_gluten)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Diagnosed with coeliac disease or gluten sensitivity celiac disease 484
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001894/ScoringFiles/PGS001894.txt.gz
PGS001895
(portability-PLR_cholesterol)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Cholesterol total cholesterol measurement 16,576
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001895/ScoringFiles/PGS001895.txt.gz
PGS001896
(portability-PLR_darker_hair0)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Hair color (natural, before greying) strand of hair color 31,036
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001896/ScoringFiles/PGS001896.txt.gz
PGS001897
(portability-PLR_darker_skin0)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Skin color Abnormal skin pigmentation 15,817
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001897/ScoringFiles/PGS001897.txt.gz
PGS001898
(portability-PLR_depressed_for_1w)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Ever depressed for a whole week depressive symptom measurement 5,777
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001898/ScoringFiles/PGS001898.txt.gz
PGS001899
(portability-PLR_depression_feelings)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Recent feelings of depression depressive symptom measurement 2,434
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001899/ScoringFiles/PGS001899.txt.gz
PGS001900
(portability-PLR_diastolic_BP)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Diastolic blood pressure, automated reading diastolic blood pressure 66,335
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001900/ScoringFiles/PGS001900.txt.gz
PGS001901
(portability-PLR_drink_alcohol)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Alcohol drinker status alcohol drinking 1,065
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001901/ScoringFiles/PGS001901.txt.gz
PGS001902
(portability-PLR_ECG_P_duration)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 P duration P wave duration 640
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001902/ScoringFiles/PGS001902.txt.gz
PGS001903
(portability-PLR_ECG_PP_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 PP interval PP interval 4,368
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001903/ScoringFiles/PGS001903.txt.gz
PGS001904
(portability-PLR_ECG_PQ_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 PQ interval PR interval 826
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001904/ScoringFiles/PGS001904.txt.gz
PGS001905
(portability-PLR_ECG_QT_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 QT interval QT interval 2,300
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001905/ScoringFiles/PGS001905.txt.gz
PGS001906
(portability-PLR_ECG_QTC_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 QTc interval QT interval 641
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001906/ScoringFiles/PGS001906.txt.gz
PGS001907
(portability-PLR_ECG_RR_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 RR interval RR interval 1,964
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001907/ScoringFiles/PGS001907.txt.gz
PGS001908
(portability-PLR_erythrocyte_width)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Red blood cell (erythrocyte) distribution width Red cell distribution width 32,431
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001908/ScoringFiles/PGS001908.txt.gz
PGS001909
(portability-PLR_erythrocyte)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Red blood cell (erythrocyte) count erythrocyte count 81,887
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001909/ScoringFiles/PGS001909.txt.gz
PGS001910
(portability-PLR_ever_cannabis)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Ever taken cannabis Cannabis use 9,341
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001910/ScoringFiles/PGS001910.txt.gz
PGS001911
(portability-PLR_ever_smoked)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Ever smoked smoking status measurement 41,266
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001911/ScoringFiles/PGS001911.txt.gz
PGS001912
(portability-PLR_F_age_first_birth)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Age at first live birth age at first birth measurement 15,201
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001912/ScoringFiles/PGS001912.txt.gz
PGS001913
(portability-PLR_F_length_menstrual_cycle)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Length of menstrual cycle menstrual cycle attribute 339
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001913/ScoringFiles/PGS001913.txt.gz
PGS001914
(portability-PLR_F_log_testosterone)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Testosterone (female only) testosterone measurement,
female		 18,179
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001914/ScoringFiles/PGS001914.txt.gz
PGS001915
(portability-PLR_F_menarche)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Age when periods started (menarche) age at menarche 38,940
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001915/ScoringFiles/PGS001915.txt.gz
PGS001916
(portability-PLR_fall_1y)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Falls in the last year fall 9,917
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001916/ScoringFiles/PGS001916.txt.gz
PGS001917
(portability-PLR_fat_perc)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Body fat percentage body fat percentage 107,244
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001917/ScoringFiles/PGS001917.txt.gz
PGS001918
(portability-PLR_FEV1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Forced expiratory volume in 1-second (FEV1), Best measure forced expiratory volume 79,136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001918/ScoringFiles/PGS001918.txt.gz
PGS001919
(portability-PLR_fluid_intelligence)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Fluid intelligence score intelligence 26,145
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001919/ScoringFiles/PGS001919.txt.gz
PGS001920
(portability-PLR_foreboding_feelings)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Recent feelings of foreboding worry measurement 2,894
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001920/ScoringFiles/PGS001920.txt.gz
PGS001921
(portability-PLR_fracture_5y)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Fractured/broken bones in last 5 years bone fracture 7,965
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001921/ScoringFiles/PGS001921.txt.gz
PGS001922
(portability-PLR_FVC)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Forced vital capacity (FVC), Best measure vital capacity 85,349
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001922/ScoringFiles/PGS001922.txt.gz
PGS001923
(portability-PLR_geek_time)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Time spent watching television (TV) or using computer lifestyle measurement 50,583
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001923/ScoringFiles/PGS001923.txt.gz
PGS001924
(portability-PLR_glasses)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Wears glasses or contact lenses eye measurement 311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001924/ScoringFiles/PGS001924.txt.gz
PGS001925
(portability-PLR_haematocrit_perc)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Haematocrit percentage hematocrit 67,571
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001925/ScoringFiles/PGS001925.txt.gz
PGS001926
(portability-PLR_haemoglobin)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Haemoglobin concentration hemoglobin measurement 69,467
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001926/ScoringFiles/PGS001926.txt.gz
PGS001927
(portability-PLR_hand_grip_strength)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Hand grip strength (mean of both) grip strength measurement 73,846
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001927/ScoringFiles/PGS001927.txt.gz
PGS001928
(portability-PLR_headaches_for_3m)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Headaches for 3+ months headache disorder 5,709
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001928/ScoringFiles/PGS001928.txt.gz
PGS001929
(portability-PLR_height)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Standing height body height 156,514
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001929/ScoringFiles/PGS001929.txt.gz
PGS001930
(portability-PLR_immature_reticulocyte_frac)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Immature reticulocyte fraction reticulocyte amount 39,162
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001930/ScoringFiles/PGS001930.txt.gz
PGS001931
(portability-PLR_income)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Average total household income before tax household income 41,836
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001931/ScoringFiles/PGS001931.txt.gz
PGS001932
(portability-PLR_insomnia)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Sleeplessness / insomnia insomnia 37,712
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001932/ScoringFiles/PGS001932.txt.gz
PGS001933
(portability-PLR_LDL)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 LDL direct low density lipoprotein cholesterol measurement 25,604
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001933/ScoringFiles/PGS001933.txt.gz
PGS001934
(portability-PLR_less_alcohol)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Alcohol intake frequency alcohol consumption quality 50,955
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001934/ScoringFiles/PGS001934.txt.gz
PGS001935
(portability-PLR_less_happy_with_health)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 General happiness with own health health satisfaction measurement 9,070
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001935/ScoringFiles/PGS001935.txt.gz
PGS001936
(portability-PLR_less_happy)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 General happiness wellbeing measurement 10,628
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001936/ScoringFiles/PGS001936.txt.gz
Showing 4901 to 4950 of 6972 rows