Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001051
(GBE_HC96)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Polymyalgia rheumatica polymyalgia rheumatica 69
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001051/ScoringFiles/PGS001051.txt.gz
PGS001878
(portability-PLR_717)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Polymyalgia rheumatica polymyalgia rheumatica 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001878/ScoringFiles/PGS001878.txt.gz
PGS002091
(portability-ldpred2_717)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Polymyalgia rheumatica polymyalgia rheumatica 129,938
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002091/ScoringFiles/PGS002091.txt.gz
PGS018734
(TPMI_250.6_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 669
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018734/ScoringFiles/PGS018734.txt.gz
PGS018735
(TPMI_250.6_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 939,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018735/ScoringFiles/PGS018735.txt.gz
PGS018736
(TPMI_250.6_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 54,980
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018736/ScoringFiles/PGS018736.txt.gz
PGS018737
(TPMI_250.6_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 983,767
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018737/ScoringFiles/PGS018737.txt.gz
PGS018738
(TPMI_250.6_PRSmix+)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 1,071,477
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018738/ScoringFiles/PGS018738.txt.gz
PGS018739
(TPMI_250.6_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 996,392
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018739/ScoringFiles/PGS018739.txt.gz
PGS003039
(ExPRSweb_PUFAs_MAGNETIC-otPUFA_LASSOSUM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Polyunsatturated fatty acids polyunsaturated fatty acid measurement 378,933
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003039/ScoringFiles/PGS003039.txt.gz
PGS003040
(ExPRSweb_PUFAs_MAGNETIC-otPUFA_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Polyunsatturated fatty acids polyunsaturated fatty acid measurement 13
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003040/ScoringFiles/PGS003040.txt.gz
PGS003041
(ExPRSweb_PUFAs_MAGNETIC-otPUFA_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Polyunsatturated fatty acids polyunsaturated fatty acid measurement 13
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003041/ScoringFiles/PGS003041.txt.gz
PGS003042
(ExPRSweb_PUFAs_MAGNETIC-otPUFA_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Polyunsatturated fatty acids polyunsaturated fatty acid measurement 272
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003042/ScoringFiles/PGS003042.txt.gz
PGS003043
(ExPRSweb_PUFAs_MAGNETIC-otPUFA_PRSCS_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Polyunsatturated fatty acids polyunsaturated fatty acid measurement 1,116,151
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003043/ScoringFiles/PGS003043.txt.gz
PGS001518
(GBE_INI100010)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Portion size diet measurement 591
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001518/ScoringFiles/PGS001518.txt.gz
PGS001519
(GBE_INI4199)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Position of pulse wave notch arterial stiffness measurement 693
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001519/ScoringFiles/PGS001519.txt.gz
PGS001520
(GBE_INI4198)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Position of the pulse wave peak arterial stiffness measurement 1,358
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001520/ScoringFiles/PGS001520.txt.gz
PGS005393
(PGS_SEXUAL_ASSAULT_PTSD)
 PGP000778 |
Bugiga AVG et al. Braz J Psychiatry (2024)
 Post-traumatic stress disorder post-traumatic stress disorder 53,705
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005393/ScoringFiles/PGS005393.txt.gz
PGS001974
(portability-PLR_log_potassium_urine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Potassium in urine urine potassium amount 21,512
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001974/ScoringFiles/PGS001974.txt.gz
PGS002192
(portability-ldpred2_log_potassium_urine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Potassium in urine urine potassium amount 881,567
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002192/ScoringFiles/PGS002192.txt.gz
PGS000693
(snpnet.Potassium_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Potassium in urine [mmol/L] urine potassium amount 2,423
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000693/ScoringFiles/PGS000693.txt.gz - Check Terms/Licenses
PGS001066
(GBE_QT_FC1001359)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Poultry intake diet measurement 1,609
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001066/ScoringFiles/PGS001066.txt.gz
PGS001903
(portability-PLR_ECG_PP_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 PP interval PP interval 4,368
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001903/ScoringFiles/PGS001903.txt.gz
PGS002117
(portability-ldpred2_ECG_PP_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 PP interval PP interval 667,705
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002117/ScoringFiles/PGS002117.txt.gz
PGS001521
(GBE_INI22330)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 PQ interval PR interval 391
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001521/ScoringFiles/PGS001521.txt.gz
PGS001904
(portability-PLR_ECG_PQ_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 PQ interval PR interval 826
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001904/ScoringFiles/PGS001904.txt.gz
PGS002118
(portability-ldpred2_ECG_PQ_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 PQ interval PR interval 413,539
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002118/ScoringFiles/PGS002118.txt.gz
PGS003499
(cont-decay-ECG_PQ_interval)
 PGP000457 |
Ding Y et al. Nature (2023)
 PQ interval PR interval 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003499/ScoringFiles/PGS003499.txt.gz
PGS000844
(VAT_Mass)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Predicted visceral adipose tissue visceral adipose tissue quantity 518
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000844/ScoringFiles/PGS000844.txt.gz
PGS004593
(pe)
 PGP000574 |
Nurkkala J et al. J Hypertens (2022)
 Preeclampsia preeclampsia 1,102,059
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004593/ScoringFiles/PGS004593.txt.gz
PGS003586
(PE)
 PGP000462 |
Honigberg MC et al. Nat Med (2023)
 Pre-eclampsia preeclampsia 1,087,033
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003586/ScoringFiles/PGS003586.txt.gz
PGS019205
(TPMI_427.6_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Premature beats Premature atrial contractions 59
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019205/ScoringFiles/PGS019205.txt.gz
PGS019206
(TPMI_427.6_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Premature beats Premature atrial contractions 292,424
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019206/ScoringFiles/PGS019206.txt.gz
PGS019207
(TPMI_427.6_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Premature beats Premature atrial contractions 483,932
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019207/ScoringFiles/PGS019207.txt.gz
PGS019208
(TPMI_427.6_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Premature beats Premature atrial contractions 983,820
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019208/ScoringFiles/PGS019208.txt.gz
PGS019209
(TPMI_427.6_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Premature beats Premature atrial contractions 1,003,465
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019209/ScoringFiles/PGS019209.txt.gz
PGS001278
(GBE_BIN_FC12006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 previously: Blood clot in the leg (DVT) or lung deep vein thrombosis,
pulmonary embolism		 551
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001278/ScoringFiles/PGS001278.txt.gz
PGS001279
(GBE_BIN_FC8006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 previously: Blood clot in the lung deep vein thrombosis,
pulmonary embolism		 94
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001279/ScoringFiles/PGS001279.txt.gz
PGS001128
(GBE_BIN_FC20020116)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Previous smoker smoking status measurement 4,348
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001128/ScoringFiles/PGS001128.txt.gz
PGS000350
(GRS12_POAG)
 PGP000115 |
Fan BJ et al. JAMA Ophthalmol (2019)
 Primary open-angle glaucoma open-angle glaucoma 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000350/ScoringFiles/PGS000350.txt.gz
PGS001792
(1kgeur_gbmi_leaveUKBBout_POAG_pst_eff_a1_b0.5_phiauto)
 PGP000262 |
Wang Y et al. Cell Genom (2023)
 Primary open-angle glaucoma glaucoma 911,402
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001792/ScoringFiles/PGS001792.txt.gz
PGS001797
(1kgeur_gbmi_POAG_pst_eff_a1_b0.5_phiauto)
 PGP000262 |
Wang Y et al. Cell Genom (2023)
 Primary open-angle glaucoma open-angle glaucoma 885,417
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001797/ScoringFiles/PGS001797.txt.gz
PGS002741
(GRS127_POAG_META)
 PGP000352 |
Waksmunski AR et al. Ophthalmology (2022)
 Primary open-angle glaucoma open-angle glaucoma 127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002741/ScoringFiles/PGS002741.txt.gz
PGS004944
(lassosum_weights_POAG_CROSS_EUR)
 PGP000670 |
Sekimitsu S et al. JAMA Ophthalmol (2023)
 Primary open-angle glaucoma open-angle glaucoma 144,019
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004944/ScoringFiles/PGS004944.txt.gz
PGS000764
(PRS23_POAG)
 PGP000169 |
Cole BS et al. Invest Ophthalmol Vis Sci (2021)
 Primary-open angle glaucoma open-angle glaucoma 23
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000764/ScoringFiles/PGS000764.txt.gz
PGS000735
(PRS_PR)
 PGP000144 |
Tadros R et al. Eur Heart J (2019)
 PR interval PR interval 44
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000735/ScoringFiles/PGS000735.txt.gz
PGS000904
(PRS582_PR)
 PGP000236 |
Ntalla I et al. Nat Commun (2020)
 PR interval PR interval 582
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000904/ScoringFiles/PGS000904.txt.gz
PGS000905
(PRS743_PR)
 PGP000236 |
Ntalla I et al. Nat Commun (2020)
 PR interval PR interval 743
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000905/ScoringFiles/PGS000905.txt.gz
PGS000142
(DepAll)
 PGP000068 |
Cai N et al. Nat Genet (2020)
 Probable Depression (low mood or anhedonia, and seen a GP or psychiatrist for nerves, anxiety, tension or depression) seeing a general practitioner for nerves, anxiety, tension or depression, self-reported,
seeing a psychiatrist for nerves, anxiety, tension or depression, self-reported,
depressive disorder		 21,908
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000142/ScoringFiles/PGS000142.txt.gz
PGS000201
(PROB_ALC_COGA)
 PGP000084 |
Barr PB et al. Transl Psychiatry (2020)
 Problematic alcohol use alcohol dependence measurement 1,094,954
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000201/ScoringFiles/PGS000201.txt.gz
Showing 4951 to 5000 of 6982 rows