Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001565
(GBE_INI25893)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in I-IV Cerebellum (L) neuroimaging measurement,
grey matter volume measurement		 775
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001565/ScoringFiles/PGS001565.txt.gz
PGS001564
(GBE_INI25887)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Hippocampus (R) neuroimaging measurement,
grey matter volume measurement		 1,336
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001564/ScoringFiles/PGS001564.txt.gz
PGS001563
(GBE_INI25886)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Hippocampus (L) neuroimaging measurement,
grey matter volume measurement		 1,427
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001563/ScoringFiles/PGS001563.txt.gz
PGS001562
(GBE_INI25871)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Heschl's Gyrus (includes H1 and H2) (R) neuroimaging measurement,
grey matter volume measurement		 1,524
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001562/ScoringFiles/PGS001562.txt.gz
PGS001561
(GBE_INI25870)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Heschl's Gyrus (includes H1 and H2) (L) neuroimaging measurement,
grey matter volume measurement		 1,604
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001561/ScoringFiles/PGS001561.txt.gz
PGS001560
(GBE_INI25782)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Frontal Pole (L) neuroimaging measurement,
grey matter volume measurement		 2,320
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001560/ScoringFiles/PGS001560.txt.gz
PGS001559
(GBE_INI25847)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Frontal Orbital Cortex (R) neuroimaging measurement,
grey matter volume measurement		 592
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001559/ScoringFiles/PGS001559.txt.gz
PGS001558
(GBE_INI25846)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Frontal Orbital Cortex (L) neuroimaging measurement,
grey matter volume measurement		 826
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001558/ScoringFiles/PGS001558.txt.gz
PGS001557
(GBE_INI25862)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Frontal Operculum Cortex (L) neuroimaging measurement,
grey matter volume measurement		 804
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001557/ScoringFiles/PGS001557.txt.gz
PGS001556
(GBE_INI25845)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Cuneal Cortex (R) neuroimaging measurement,
grey matter volume measurement		 930
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001556/ScoringFiles/PGS001556.txt.gz
PGS001555
(GBE_INI25905)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Crus II Cerebellum (R) neuroimaging measurement,
grey matter volume measurement		 2,510
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001555/ScoringFiles/PGS001555.txt.gz
PGS001554
(GBE_INI25903)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Crus II Cerebellum (L) neuroimaging measurement,
grey matter volume measurement		 1,913
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001554/ScoringFiles/PGS001554.txt.gz
PGS001553
(GBE_INI25902)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Crus I Cerebellum (R) neuroimaging measurement,
grey matter volume measurement		 2,371
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001553/ScoringFiles/PGS001553.txt.gz
PGS001552
(GBE_INI25841)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Cingulate Gyrus, posterior division (R) neuroimaging measurement,
grey matter volume measurement		 652
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001552/ScoringFiles/PGS001552.txt.gz
PGS001551
(GBE_INI25839)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Cingulate Gyrus, anterior division (R) neuroimaging measurement,
grey matter volume measurement		 244
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001551/ScoringFiles/PGS001551.txt.gz
PGS001550
(GBE_INI25838)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Cingulate Gyrus, anterior division (L) neuroimaging measurement,
grey matter volume measurement		 389
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001550/ScoringFiles/PGS001550.txt.gz
PGS001549
(GBE_INI25865)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Central Opercular Cortex (R) neuroimaging measurement,
grey matter volume measurement		 1,123
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001549/ScoringFiles/PGS001549.txt.gz
PGS001548
(GBE_INI25864)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Central Opercular Cortex (L) neuroimaging measurement,
grey matter volume measurement		 194
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001548/ScoringFiles/PGS001548.txt.gz
PGS001547
(GBE_INI25892)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Brain-Stem neuroimaging measurement,
grey matter volume measurement		 632
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001547/ScoringFiles/PGS001547.txt.gz
PGS001546
(GBE_INI25888)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Amygdala (L) neuroimaging measurement,
grey matter volume measurement		 115
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001546/ScoringFiles/PGS001546.txt.gz
PGS001544
(GBE_INI25006)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter neuroimaging measurement,
grey matter volume measurement		 2,061
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001544/ScoringFiles/PGS001544.txt.gz
PGS001543
(GBE_INI25014)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of caudate (R) neuroimaging measurement,
caudate nucleus volume		 1,910
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001543/ScoringFiles/PGS001543.txt.gz
PGS001542
(GBE_INI25013)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of caudate (L) neuroimaging measurement,
caudate nucleus volume		 1,055
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001542/ScoringFiles/PGS001542.txt.gz
PGS001539
(GBE_INI25025)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of brain stem + 4th ventricle neuroimaging measurement,
brain stem volume,
fourth ventricle volume		 1,183
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001539/ScoringFiles/PGS001539.txt.gz
PGS001541
(GBE_INI25009)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of brain, grey+white matter (normalised for head size) neuroimaging measurement,
grey matter volume measurement,
white matter volume measurement		 1,999
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001541/ScoringFiles/PGS001541.txt.gz
PGS001540
(GBE_INI25010)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of brain, grey+white matter neuroimaging measurement,
grey matter volume measurement,
white matter volume measurement		 1,871
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001540/ScoringFiles/PGS001540.txt.gz
PGS001538
(GBE_INI25024)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of accumbens (R) neuroimaging measurement,
nucleus accumbens volume		 643
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001538/ScoringFiles/PGS001538.txt.gz
PGS001537
(GBE_INI25023)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of accumbens (L) neuroimaging measurement,
nucleus accumbens volume		 647
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001537/ScoringFiles/PGS001537.txt.gz
PGS001536
(GBE_HC1188)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Vitiligo (time-to-event) Vitiligo 77
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001536/ScoringFiles/PGS001536.txt.gz
PGS000738
(CONFIRMED_PGS)
 PGP000145 |
Roberts GHL et al. Am J Hum Genet (2019)
 Vitiligo Vitiligo 48
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000738/ScoringFiles/PGS000738.txt.gz
PGS000760
(VIT)
 PGP000164 |
Khan Z et al. Nat Commun (2021)
 Vitiligo Vitiligo 42
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000760/ScoringFiles/PGS000760.txt.gz
PGS000702
(snpnet.Vitamin_D)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Vitamin D [nmol/L] vitamin D amount 8,012
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000702/ScoringFiles/PGS000702.txt.gz - Check Terms/Licenses
PGS004344
(X30890.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Vitamin D (nmol/L) vitamin D amount 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004344/ScoringFiles/PGS004344.txt.gz
PGS001982
(portability-PLR_log_vitaminD)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 35,123
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001982/ScoringFiles/PGS001982.txt.gz
PGS002200
(portability-ldpred2_log_vitaminD)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 567,735
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002200/ScoringFiles/PGS002200.txt.gz
PGS002355
(biochemistry_VitaminD.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002355/ScoringFiles/PGS002355.txt.gz
PGS002427
(biochemistry_VitaminD.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 4,821
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002427/ScoringFiles/PGS002427.txt.gz
PGS002476
(biochemistry_VitaminD.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 16,848
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002476/ScoringFiles/PGS002476.txt.gz
PGS002525
(biochemistry_VitaminD.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 99,894
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002525/ScoringFiles/PGS002525.txt.gz
PGS002574
(biochemistry_VitaminD.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 1,677
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002574/ScoringFiles/PGS002574.txt.gz
PGS002623
(biochemistry_VitaminD.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 1,183
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002623/ScoringFiles/PGS002623.txt.gz
PGS002672
(biochemistry_VitaminD.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 330,506
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002672/ScoringFiles/PGS002672.txt.gz
PGS002721
(biochemistry_VitaminD.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 981,998
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002721/ScoringFiles/PGS002721.txt.gz
PGS003174
(ExPRSweb_VitD_100021-irnt_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 312,224
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003174/ScoringFiles/PGS003174.txt.gz
PGS003175
(ExPRSweb_VitD_100021-irnt_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 11
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003175/ScoringFiles/PGS003175.txt.gz
PGS003176
(ExPRSweb_VitD_100021-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003176/ScoringFiles/PGS003176.txt.gz
PGS003177
(ExPRSweb_VitD_100021-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 10,318,270
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003177/ScoringFiles/PGS003177.txt.gz
PGS003178
(ExPRSweb_VitD_100021-irnt_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 1,113,819
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003178/ScoringFiles/PGS003178.txt.gz
PGS003179
(ExPRSweb_VitD_100021-raw_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 310,479
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003179/ScoringFiles/PGS003179.txt.gz
PGS003180
(ExPRSweb_VitD_100021-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 5
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003180/ScoringFiles/PGS003180.txt.gz
Showing 301 to 350 of 5134 rows