Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002940
(ExPRSweb_Glucose_30740-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Glucose glucose measurement 1,080
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002940/ScoringFiles/PGS002940.txt.gz
PGS001586
(GBE_INI25851)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Parahippocampal Gyrus, posterior division (R) neuroimaging measurement,
grey matter volume measurement		 1,078
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001586/ScoringFiles/PGS001586.txt.gz
PGS001579
(GBE_INI25805)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Middle Temporal Gyrus, posterior division (R) neuroimaging measurement,
grey matter volume measurement		 1,076
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001579/ScoringFiles/PGS001579.txt.gz
PGS001427
(GBE_INI25058)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in genu of corpus callosum on FA skeleton neuroimaging measurement,
brain volume		 1,073
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001427/ScoringFiles/PGS001427.txt.gz
PGS001901
(portability-PLR_drink_alcohol)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Alcohol drinker status alcohol drinking 1,065
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001901/ScoringFiles/PGS001901.txt.gz
PGS002775
(GTG_CAD_maxCT)
 PGP000365 |
Wong CK et al. PLoS One (2022)
 Incident coronary artery disease coronary artery disorder 1,059
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002775/ScoringFiles/PGS002775.txt.gz - Check Terms/Licenses
PGS003286
(ExPRSweb_CysC_30720-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 1,057
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003286/ScoringFiles/PGS003286.txt.gz
PGS001542
(GBE_INI25013)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of caudate (L) neuroimaging measurement,
caudate nucleus volume		 1,055
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001542/ScoringFiles/PGS001542.txt.gz
PGS003698
(R_parasubiculum_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right parasubiculum volume parasubiculum volume 1,050
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003698/ScoringFiles/PGS003698.txt.gz
PGS001597
(GBE_INI25786)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Superior Frontal Gyrus (L) neuroimaging measurement,
superior frontal gyrus grey matter volume measurement		 1,049
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001597/ScoringFiles/PGS001597.txt.gz
PGS002941
(ExPRSweb_Glucose_30740-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Glucose glucose measurement 1,049
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002941/ScoringFiles/PGS002941.txt.gz
PGS001656
(GBE_INI25507)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA FA in tract posterior thalamic radiation (L) neuroimaging measurement,
brain volume		 1,044
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001656/ScoringFiles/PGS001656.txt.gz
PGS001107
(GBE_BIN30030510)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 UACR [> 30 mg/g] urinary albumin to creatinine ratio 1,040
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001107/ScoringFiles/PGS001107.txt.gz
PGS003625
(L_CA3_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left CA3 body volume hippocampal CA3 volume 1,034
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003625/ScoringFiles/PGS003625.txt.gz
PGS001758
(GBE_INI25541)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MD in tract uncinate fasciculus (R) neuroimaging measurement,
brain volume		 1,033
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001758/ScoringFiles/PGS001758.txt.gz
PGS000831
(Total_cholesterol_PGS)
 PGP000210 |
Zubair N et al. Sci Rep (2019)
 Total cholesterol total cholesterol measurement 1,032
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000831/ScoringFiles/PGS000831.txt.gz - Check Terms/Licenses
PGS001317
(GBE_BIN_FC1006150)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Vascular/heart problems diagnosed by doctor Heart attack myocardial infarction 1,030
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001317/ScoringFiles/PGS001317.txt.gz
PGS001720
(GBE_INI25607)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L2 in tract forceps minor neuroimaging measurement,
brain volume		 1,030
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001720/ScoringFiles/PGS001720.txt.gz
PGS001086
(GBE_BIN100580)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Alcohol consumption alcohol consumption quality 1,028
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001086/ScoringFiles/PGS001086.txt.gz
PGS001135
(GBE_HC78)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Arthritis (nos) arthritic joint disease 1,028
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001135/ScoringFiles/PGS001135.txt.gz
PGS001607
(GBE_INI25797)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Temporal Pole (R) neuroimaging measurement,
grey matter volume measurement		 1,025
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001607/ScoringFiles/PGS001607.txt.gz
PGS001643
(GBE_INI25488)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA FA in tract acoustic radiation (L) neuroimaging measurement,
brain volume		 1,025
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001643/ScoringFiles/PGS001643.txt.gz
PGS000586
(PRSWEB_PHECODE185_Pca-PRACTICAL_PT_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 1,023
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000586/ScoringFiles/PGS000586.txt.gz
PGS001765
(GBE_INI25566)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MO in tract superior thalamic radiation (R) neuroimaging measurement,
brain volume		 1,023
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001765/ScoringFiles/PGS001765.txt.gz
PGS001507
(GBE_INI25028)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Median T2star in caudate (L) neuroimaging measurement 1,009
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001507/ScoringFiles/PGS001507.txt.gz
PGS001641
(GBE_INI25007)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of white matter (normalised for head size) neuroimaging measurement,
white matter volume measurement		 1,005
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001641/ScoringFiles/PGS001641.txt.gz
PGS012578
(PRS1004_t2d)
 PGP000813 |
Song M et al. Sci Rep (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,004
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012578/ScoringFiles/PGS012578.txt.gz
PGS001666
(GBE_INI25655)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract cingulate gyrus part of cingulum (R) neuroimaging measurement,
brain volume		 998
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001666/ScoringFiles/PGS001666.txt.gz
PGS003107
(ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 995
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003107/ScoringFiles/PGS003107.txt.gz
PGS001283
(GBE_INI3761)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Allergic disease (hay fever, rhinitis or eczema) allergic disease 993
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001283/ScoringFiles/PGS001283.txt.gz
PGS001714
(GBE_INI25597)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L2 in tract acoustic radiation (R) neuroimaging measurement,
brain volume		 993
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001714/ScoringFiles/PGS001714.txt.gz
PGS001056
(GBE_QT_FC1001369)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Beef intake diet measurement 991
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001056/ScoringFiles/PGS001056.txt.gz
PGS001389
(GBE_INI1319)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Dried fruit intake diet measurement 989
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001389/ScoringFiles/PGS001389.txt.gz
PGS001588
(GBE_INI25869)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Planum Polare (R) neuroimaging measurement,
grey matter volume measurement		 989
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001588/ScoringFiles/PGS001588.txt.gz
PGS002555
(disease_HYPOTHYROIDISM_SELF_REP.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Hypothyroidism hypothyroidism 986
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002555/ScoringFiles/PGS002555.txt.gz
PGS004123
(pt_clump_nested.CV.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 982
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004123/ScoringFiles/PGS004123.txt.gz
PGS001662
(GBE_INI25651)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract acoustic radiation (R) neuroimaging measurement,
brain volume		 979
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001662/ScoringFiles/PGS001662.txt.gz
PGS001361
(GBE_INI5104)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 3mm strong meridian angle (L) eye measurement 976
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001361/ScoringFiles/PGS001361.txt.gz
PGS001753
(GBE_INI25530)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MD in tract inferior longitudinal fasciculus (R) neuroimaging measurement,
brain volume		 975
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001753/ScoringFiles/PGS001753.txt.gz
PGS001129
(GBE_BIN_FC30022506)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Smoking status (ever vs never smokers) smoking status measurement 974
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001129/ScoringFiles/PGS001129.txt.gz
PGS000301
(GRS970_SBP)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Systolic blood pressure systolic blood pressure 970
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000301/ScoringFiles/PGS000301.txt.gz
PGS001174
(GBE_HC1125)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Cholelithiasis (time-to-event) cholelithiasis 970
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001174/ScoringFiles/PGS001174.txt.gz
PGS000302
(GRS962_DBP)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Diastolic blood pressure diastolic blood pressure 962
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000302/ScoringFiles/PGS000302.txt.gz
PGS001491
(GBE_INI25389)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in uncinate fasciculus on FA skeleton (L) neuroimaging measurement,
brain volume		 962
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001491/ScoringFiles/PGS001491.txt.gz
PGS001764
(GBE_INI25563)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MO in tract superior longitudinal fasciculus (L) neuroimaging measurement,
brain volume		 961
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001764/ScoringFiles/PGS001764.txt.gz
PGS001244
(GBE_BIN_FC30001727)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ease of skin tanning (get mildly or occasionally tanned) suntan 958
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001244/ScoringFiles/PGS001244.txt.gz
PGS001679
(GBE_INI25657)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract parahippocampal part of cingulum (R) neuroimaging measurement,
brain volume		 955
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001679/ScoringFiles/PGS001679.txt.gz
PGS000636
(PRSWEB_PHECODE193_UKBB-SAIGE-HRC-X193_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Thyroid cancer thyroid gland carcinoma 954
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000636/ScoringFiles/PGS000636.txt.gz
PGS002570
(disease_THYROID_ANY_SELF_REP.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Thyroid (self-reported conditions) thyroid gland disorder 954
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002570/ScoringFiles/PGS002570.txt.gz
PGS001629
(GBE_INI25920)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in X Cerebellum (R) neuroimaging measurement,
grey matter volume measurement		 950
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001629/ScoringFiles/PGS001629.txt.gz
Showing 3701 to 3750 of 5385 rows