Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000166
(eo_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Eosinophil percentage of white cells eosinophil percentage of leukocytes 571
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000166/ScoringFiles/PGS000166.txt.gz
PGS000169
(hlr)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 High light scatter reticulocyte count reticulocyte count 570
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000169/ScoringFiles/PGS000169.txt.gz
PGS001333
(GBE_HC1582)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Chronic obstructive pulmonary disease (algorithmically-defined) chronic obstructive pulmonary disease 569
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001333/ScoringFiles/PGS001333.txt.gz
PGS000170
(hlr_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 High light scatter reticulocyte percentage of red cells reticulocyte count 566
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000170/ScoringFiles/PGS000170.txt.gz
PGS001874
(portability-PLR_706.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Sebaceous cyst Epidermal Inclusion Cyst 563
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001874/ScoringFiles/PGS001874.txt.gz
PGS001594
(GBE_INI25883)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Putamen (R) neuroimaging measurement,
grey matter volume measurement		 562
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001594/ScoringFiles/PGS001594.txt.gz
PGS002537
(other_MORNINGPERSON.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Chronotype (morning person) chronotype measurement 562
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002537/ScoringFiles/PGS002537.txt.gz
PGS000717
(PGS557_albs)
 PGP000132 |
Richardson TG et al. BMJ (2020)
 Adult life body size body mass index 557
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000717/ScoringFiles/PGS000717.txt.gz
PGS000185
(pdw)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Platelet distribution width platelet component distribution width 555
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000185/ScoringFiles/PGS000185.txt.gz
PGS000189
(ret)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Reticulocyte count reticulocyte count 555
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000189/ScoringFiles/PGS000189.txt.gz
PGS001336
(GBE_cancer1002)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Breast cancer breast carcinoma 555
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001336/ScoringFiles/PGS001336.txt.gz
PGS001501
(GBE_INI25469)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in posterior thalamic radiation on FA skeleton (L) neuroimaging measurement,
brain volume		 554
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001501/ScoringFiles/PGS001501.txt.gz
PGS001278
(GBE_BIN_FC12006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 previously: Blood clot in the leg (DVT) or lung pulmonary embolism,
deep vein thrombosis		 551
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001278/ScoringFiles/PGS001278.txt.gz
PGS002604
(disease_HYPOTHYROIDISM_SELF_REP.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Hypothyroidism hypothyroidism 550
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002604/ScoringFiles/PGS002604.txt.gz
PGS000178
(mono_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Monocyte percentage of white cells monocyte percentage of leukocytes 549
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000178/ScoringFiles/PGS000178.txt.gz
PGS000660
(PRS-HDL)
 PGP000121 |
Tam CHT et al. Genome Med (2021)
 HDL cholesterol high density lipoprotein cholesterol measurement 549
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000660/ScoringFiles/PGS000660.txt.gz
PGS002619
(disease_THYROID_ANY_SELF_REP.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Thyroid (self-reported conditions) thyroid disease 548
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002619/ScoringFiles/PGS002619.txt.gz
PGS001705
(GBE_INI25581)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract inferior fronto-occipital fasciculus (L) neuroimaging measurement,
brain volume		 547
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001705/ScoringFiles/PGS001705.txt.gz
PGS000188
(rdw)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Red cell distribution width Red cell distribution width 546
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000188/ScoringFiles/PGS000188.txt.gz
PGS002602
(disease_HI_CHOL_SELF_REP.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 High cholesterol Hypercholesterolemia 545
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002602/ScoringFiles/PGS002602.txt.gz
PGS002262
(metaPRS_CAD)
 PGP000289 |
Lu X et al. Eur Heart J (2022)
 Coronary artery disease coronary artery disease 540
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002262/ScoringFiles/PGS002262.txt.gz
PGS002539
(disease_DERMATOLOGY.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Dermatologic diseases skin disease 540
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002539/ScoringFiles/PGS002539.txt.gz
PGS001700
(GBE_INI25727)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ISOVF in tract superior thalamic radiation (L) neuroimaging measurement,
brain volume		 538
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001700/ScoringFiles/PGS001700.txt.gz
PGS000190
(ret_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Reticulocyte fraction of red cells reticulocyte count 537
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000190/ScoringFiles/PGS000190.txt.gz
PGS000931
(GBE_BIN_FC11006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Blood clot or deep vein thrombosis (diagnosed by doctor) deep vein thrombosis,
thrombotic disease		 534
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000931/ScoringFiles/PGS000931.txt.gz
PGS001386
(GBE_INI21049)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Degree bothered by pain in arms/legs/joints in the past 3 months health-related quality of life measurement 534
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001386/ScoringFiles/PGS001386.txt.gz
PGS001710
(GBE_INI25591)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract superior longitudinal fasciculus (R) neuroimaging measurement,
brain volume		 534
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001710/ScoringFiles/PGS001710.txt.gz
PGS002259
(metaPRS_Stroke)
 PGP000285 |
Lu X et al. Neurology (2021)
 Stroke stroke 534
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002259/ScoringFiles/PGS002259.txt.gz
PGS001600
(GBE_INI25800)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Superior Temporal Gyrus, posterior division (L) neuroimaging measurement,
grey matter volume measurement		 530
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001600/ScoringFiles/PGS001600.txt.gz
PGS002543
(disease_ENDOCRINE_DIABETES.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Endocrine and diabetes diseases diabetes mellitus,
endocrine system disease		 528
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002543/ScoringFiles/PGS002543.txt.gz
PGS001602
(GBE_INI25875)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Supracalcarine Cortex (R) neuroimaging measurement,
grey matter volume measurement		 527
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001602/ScoringFiles/PGS001602.txt.gz
PGS003592
(L_GC-ML-DG_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left granule cell and molecular layer of the dentate gyrus body volume dentate gyrus volume 527
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003592/ScoringFiles/PGS003592.txt.gz
PGS001005
(GBE_INI134)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Number of self reported cancers number of cancers, self-reported 526
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001005/ScoringFiles/PGS001005.txt.gz
PGS000620
(PRSWEB_PHECODE191.11_C71_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain cancer brain cancer 522
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000620/ScoringFiles/PGS000620.txt.gz
PGS004171
(t1d_1)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 1 diabetes type 1 diabetes mellitus 520
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004171/ScoringFiles/PGS004171.txt.gz
PGS001257
(GBE_INI1737)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Childhood sunburn sunburn 519
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001257/ScoringFiles/PGS001257.txt.gz
PGS002944
(ExPRSweb_Glucose_FGovertime-corrected_LASSOSUM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Glucose blood glucose amount 519
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002944/ScoringFiles/PGS002944.txt.gz
PGS000844
(VAT_Mass)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Predicted visceral adipose tissue visceral adipose tissue quantity 518
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000844/ScoringFiles/PGS000844.txt.gz
PGS002567
(cov_SMOKING_STATUS.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Smoking status smoking status measurement 517
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002567/ScoringFiles/PGS002567.txt.gz
PGS000168
(hgb)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Hemoglobin concentration hemoglobin measurement 515
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000168/ScoringFiles/PGS000168.txt.gz
PGS001704
(GBE_INI25580)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract forceps minor neuroimaging measurement,
brain volume		 514
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001704/ScoringFiles/PGS001704.txt.gz
PGS002587
(cov_EDU_COLLEGE.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 514
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002587/ScoringFiles/PGS002587.txt.gz
PGS001622
(GBE_INI25899)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in VI Cerebellum (R) neuroimaging measurement,
grey matter volume measurement		 513
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001622/ScoringFiles/PGS001622.txt.gz
PGS001677
(GBE_INI25666)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract middle cerebellar peduncle neuroimaging measurement,
brain volume		 512
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001677/ScoringFiles/PGS001677.txt.gz
PGS000415
(PRSWEB_PHECODE172.1_C3-MELANOMA-SKIN_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Melanomas of skin (diagnosis or history) melanoma 505
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000415/ScoringFiles/PGS000415.txt.gz
PGS002579
(disease_ASTHMA_DIAGNOSED.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Asthma asthma 503
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002579/ScoringFiles/PGS002579.txt.gz
PGS000167
(hct)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Hematocrit hematocrit 502
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000167/ScoringFiles/PGS000167.txt.gz
PGS001625
(GBE_INI25909)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in VIIIa Cerebellum (L) neuroimaging measurement,
grey matter volume measurement		 500
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001625/ScoringFiles/PGS001625.txt.gz
PGS003196
(ExPRSweb_VitD_30890-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D level 500
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003196/ScoringFiles/PGS003196.txt.gz
PGS001112
(GBE_BIN_FC1006154)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Aspirin aspirin use measurement 499
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001112/ScoringFiles/PGS001112.txt.gz
Showing 3801 to 3850 of 5198 rows