Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002361
(disease_CARDIOVASCULAR.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Cardiovascular disease cardiovascular disorder 920,929
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002361/ScoringFiles/PGS002361.txt.gz
PGS002364
(blood_EOSINOPHIL_COUNT.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Eosinophil count eosinophil count 920,929
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002364/ScoringFiles/PGS002364.txt.gz
PGS002369
(biochemistry_LDLdirect.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 LDL cholesterol low density lipoprotein cholesterol measurement 920,930
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002369/ScoringFiles/PGS002369.txt.gz
PGS002372
(blood_MONOCYTE_COUNT.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Monocyte count monocyte count 920,930
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002372/ScoringFiles/PGS002372.txt.gz
PGS002379
(disease_T2D.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 920,930
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002379/ScoringFiles/PGS002379.txt.gz
PGS002375
(cov_SMOKING_STATUS.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Smoking status smoking status measurement 920,934
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002375/ScoringFiles/PGS002375.txt.gz
PGS002370
(blood_LYMPHOCYTE_COUNT.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Lymphocyte count lymphocyte count 920,935
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002370/ScoringFiles/PGS002370.txt.gz
PGS002374
(blood_RED_COUNT.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 920,935
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002374/ScoringFiles/PGS002374.txt.gz
PGS002380
(blood_WHITE_COUNT.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 White blood cell count leukocyte quantity 920,936
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002380/ScoringFiles/PGS002380.txt.gz
PGS003891
(Height_PRScsx_ARB_EURweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 Height body height 921,738
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003891/ScoringFiles/PGS003891.txt.gz
PGS004815
(prostate_cancer_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Prostate cancer prostate carcinoma 922,102
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004815/ScoringFiles/PGS004815.txt.gz
PGS004816
(prostate_cancer_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Prostate cancer prostate carcinoma 922,104
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004816/ScoringFiles/PGS004816.txt.gz
PGS002146
(portability-ldpred2_height)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Standing height body height 922,538
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002146/ScoringFiles/PGS002146.txt.gz
PGS003887
(BMI_PRScsx_ARB_EURweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 Body mass index (BMI) body mass index 922,653
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003887/ScoringFiles/PGS003887.txt.gz
PGS005125
(forAFR_fromSAS)
 PGP000703 |
Tsuo K et al. Cell Genom (2022)
 Asthma asthma 922,758
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005125/ScoringFiles/PGS005125.txt.gz
PGS002162
(portability-ldpred2_log_creatinine_urine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Creatinine (enzymatic) in urine creatinine clearance measurement 922,786
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002162/ScoringFiles/PGS002162.txt.gz
PGS002226
(portability-ldpred2_sodium_urine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Sodium in urine sodium measurement 922,972
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002226/ScoringFiles/PGS002226.txt.gz
PGS002687
(disease_DIABETES_ANY_DIAGNOSED.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Diabetes (any type) diabetes mellitus 923,080
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002687/ScoringFiles/PGS002687.txt.gz
PGS005135
(forEUR_fromSAS)
 PGP000703 |
Tsuo K et al. Cell Genom (2022)
 Asthma asthma 923,118
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005135/ScoringFiles/PGS005135.txt.gz
PGS005299
(Jorda_HF_MTAG-PGS-inf_2024)
 PGP000759 |
Jordà P et al. NPJ Genom Med (2025)
 Heart failure heart failure 923,722
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005299/ScoringFiles/PGS005299.txt.gz
PGS005300
(Jorda_HF_MTAG-PGS_2024)
 PGP000759 |
Jordà P et al. NPJ Genom Med (2025)
 Heart failure heart failure 923,722
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005300/ScoringFiles/PGS005300.txt.gz
PGS005301
(Jorda_HF_MTAG-PGS_females_2024)
 PGP000759 |
Jordà P et al. NPJ Genom Med (2025)
 Heart failure heart failure 923,722
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005301/ScoringFiles/PGS005301.txt.gz
PGS005302
(Jorda_HF_MTAG-PGS_males_2024)
 PGP000759 |
Jordà P et al. NPJ Genom Med (2025)
 Heart failure heart failure 923,722
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005302/ScoringFiles/PGS005302.txt.gz
PGS002678
(disease_AID_ALL.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 923,726
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002678/ScoringFiles/PGS002678.txt.gz
PGS002696
(pigment_HAIR.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Hair color strand of hair color 924,497
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002696/ScoringFiles/PGS002696.txt.gz
PGS002149
(portability-ldpred2_insomnia)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Sleeplessness / insomnia insomnia 926,585
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002149/ScoringFiles/PGS002149.txt.gz
PGS002196
(portability-ldpred2_log_sleep)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Sleep duration sleep duration trait 927,619
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002196/ScoringFiles/PGS002196.txt.gz
PGS005366
(DPRISM_T2DPRS_trainedforEAS_EURweights)
 PGP000773 |
Huerta-Chagoya A et al. medRxiv (2025)
|Pre		 Type 2 diabetes (T2D) type 2 diabetes mellitus 929,716
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005366/ScoringFiles/PGS005366.txt.gz
PGS004036
(ldpred2.auto.GCST90018959.Height)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Height body height 929,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004036/ScoringFiles/PGS004036.txt.gz
PGS002230
(portability-ldpred2_water_intake)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Water intake drinking behavior 930,461
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002230/ScoringFiles/PGS002230.txt.gz
PGS004136
(sbayesr.auto.GCST004773.T2D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 930,497
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004136/ScoringFiles/PGS004136.txt.gz
PGS004870
(INTERVENE_MegaPRS_T2D)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 930,506
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004870/ScoringFiles/PGS004870.txt.gz
PGS003390
(best_HNSC)
 PGP000413 |
Namba S et al. Cancer Res (2022)
 Head and neck squamous cell carcinoma head and neck squamous cell carcinoma 931,477
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003390/ScoringFiles/PGS003390.txt.gz
PGS002126
(portability-ldpred2_ever_smoked)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Ever smoked smoking status measurement 931,635
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002126/ScoringFiles/PGS002126.txt.gz
PGS000359
(PRSWEB_PHECODE145.2_C3-TONGUENAS_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Tongue cancer tongue neoplasm 931,954
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000359/ScoringFiles/PGS000359.txt.gz
PGS002148
(portability-ldpred2_income)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Average total household income before tax household income 932,197
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002148/ScoringFiles/PGS002148.txt.gz
PGS003263
(ExPRSweb_Creatine_eGFRcrea-overall-IV-2GC_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 932,548
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003263/ScoringFiles/PGS003263.txt.gz
PGS003278
(ExPRSweb_Creatine_eGFRcrea-overall-IV-2GC_PRSCS_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 932,878
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003278/ScoringFiles/PGS003278.txt.gz
PGS003303
(ExPRSweb_CysC_eGFRcys-overall-IV-2GC_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Cystatin C) cystatin C measurement,
glomerular filtration rate		 933,013
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003303/ScoringFiles/PGS003303.txt.gz
PGS003318
(ExPRSweb_CysC_eGFRcys-overall-IV-2GC_PRSCS_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Cystatin C) cystatin C measurement,
glomerular filtration rate		 933,341
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003318/ScoringFiles/PGS003318.txt.gz
PGS002114
(portability-ldpred2_diastolic_BP)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Diastolic blood pressure, automated reading diastolic blood pressure 933,950
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002114/ScoringFiles/PGS002114.txt.gz
PGS002677
(disease_ASTHMA_DIAGNOSED.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Asthma asthma 934,369
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002677/ScoringFiles/PGS002677.txt.gz
PGS002788
(BD2_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Type 2 bipolar disorder bipolar II disorder 935,292
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002788/ScoringFiles/PGS002788.txt.gz
PGS002228
(portability-ldpred2_systolic_BP)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Systolic blood pressure, automated reading systolic blood pressure 937,030
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002228/ScoringFiles/PGS002228.txt.gz
PGS002787
(BD1_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Type 1 bipolar disorder bipolar I disorder 937,511
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002787/ScoringFiles/PGS002787.txt.gz
PGS002700
(disease_HI_CHOL_SELF_REP.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 High cholesterol Hypercholesterolemia 937,601
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002700/ScoringFiles/PGS002700.txt.gz
PGS004850
(Total_protein_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total protein measurement total blood protein measurement 937,777
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004850/ScoringFiles/PGS004850.txt.gz
PGS002217
(portability-ldpred2_play_computer)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Plays computer games lifestyle measurement 938,047
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002217/ScoringFiles/PGS002217.txt.gz
PGS002134
(portability-ldpred2_FEV1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Forced expiratory volume in 1-second (FEV1), Best measure forced expiratory volume 940,003
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002134/ScoringFiles/PGS002134.txt.gz
PGS002138
(portability-ldpred2_FVC)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Forced vital capacity (FVC), Best measure vital capacity 940,300
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002138/ScoringFiles/PGS002138.txt.gz
Showing 3801 to 3850 of 5337 rows