Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS001559
(GBE_INI25847)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Frontal Orbital Cortex (R) neuroimaging measurement,
grey matter volume measurement
592
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001559/ScoringFiles/PGS001559.txt.gz
PGS001558
(GBE_INI25846)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Frontal Orbital Cortex (L) neuroimaging measurement,
grey matter volume measurement
826
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001558/ScoringFiles/PGS001558.txt.gz
PGS001557
(GBE_INI25862)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Frontal Operculum Cortex (L) neuroimaging measurement,
grey matter volume measurement
804
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001557/ScoringFiles/PGS001557.txt.gz
PGS001556
(GBE_INI25845)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Cuneal Cortex (R) neuroimaging measurement,
grey matter volume measurement
930
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001556/ScoringFiles/PGS001556.txt.gz
PGS001555
(GBE_INI25905)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Crus II Cerebellum (R) neuroimaging measurement,
grey matter volume measurement
2,510
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001555/ScoringFiles/PGS001555.txt.gz
PGS001554
(GBE_INI25903)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Crus II Cerebellum (L) neuroimaging measurement,
grey matter volume measurement
1,913
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001554/ScoringFiles/PGS001554.txt.gz
PGS001553
(GBE_INI25902)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Crus I Cerebellum (R) neuroimaging measurement,
grey matter volume measurement
2,371
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001553/ScoringFiles/PGS001553.txt.gz
PGS001552
(GBE_INI25841)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Cingulate Gyrus, posterior division (R) neuroimaging measurement,
grey matter volume measurement
652
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001552/ScoringFiles/PGS001552.txt.gz
PGS001551
(GBE_INI25839)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Cingulate Gyrus, anterior division (R) neuroimaging measurement,
grey matter volume measurement
244
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001551/ScoringFiles/PGS001551.txt.gz
PGS001550
(GBE_INI25838)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Cingulate Gyrus, anterior division (L) neuroimaging measurement,
grey matter volume measurement
389
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001550/ScoringFiles/PGS001550.txt.gz
PGS001549
(GBE_INI25865)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Central Opercular Cortex (R) neuroimaging measurement,
grey matter volume measurement
1,123
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001549/ScoringFiles/PGS001549.txt.gz
PGS001548
(GBE_INI25864)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Central Opercular Cortex (L) neuroimaging measurement,
grey matter volume measurement
194
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001548/ScoringFiles/PGS001548.txt.gz
PGS001547
(GBE_INI25892)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Brain-Stem neuroimaging measurement,
grey matter volume measurement
632
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001547/ScoringFiles/PGS001547.txt.gz
PGS001546
(GBE_INI25888)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter in Amygdala (L) neuroimaging measurement,
grey matter volume measurement
115
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001546/ScoringFiles/PGS001546.txt.gz
PGS001545
(GBE_INI25005)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter (normalised for head size) neuroimaging measurement,
grey matter volume measurement
1,139
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001545/ScoringFiles/PGS001545.txt.gz
PGS001544
(GBE_INI25006)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of grey matter neuroimaging measurement,
grey matter volume measurement
2,061
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001544/ScoringFiles/PGS001544.txt.gz
PGS001543
(GBE_INI25014)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of caudate (R) neuroimaging measurement,
caudate nucleus volume
1,910
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001543/ScoringFiles/PGS001543.txt.gz
PGS001542
(GBE_INI25013)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of caudate (L) neuroimaging measurement,
caudate nucleus volume
1,055
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001542/ScoringFiles/PGS001542.txt.gz
PGS001541
(GBE_INI25009)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of brain, grey+white matter (normalised for head size) neuroimaging measurement,
grey matter volume measurement,
white matter volume measurement
1,999
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001541/ScoringFiles/PGS001541.txt.gz
PGS001540
(GBE_INI25010)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of brain, grey+white matter neuroimaging measurement,
grey matter volume measurement,
white matter volume measurement
1,871
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001540/ScoringFiles/PGS001540.txt.gz
PGS001539
(GBE_INI25025)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of brain stem + 4th ventricle neuroimaging measurement,
brain stem volume,
fourth ventricle volume
1,183
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001539/ScoringFiles/PGS001539.txt.gz
PGS001538
(GBE_INI25024)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of accumbens (R) neuroimaging measurement,
nucleus accumbens volume
643
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001538/ScoringFiles/PGS001538.txt.gz
PGS001537
(GBE_INI25023)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Volume of accumbens (L) neuroimaging measurement,
nucleus accumbens volume
647
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001537/ScoringFiles/PGS001537.txt.gz
PGS001536
(GBE_HC1188)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Vitiligo (time-to-event) vitiligo 77
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001536/ScoringFiles/PGS001536.txt.gz
PGS001535
(GBE_BIN_FC20002267)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Use of sun/uv protection (Sometimes) sun exposure measurement 309
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001535/ScoringFiles/PGS001535.txt.gz
PGS001534
(GBE_INI25781)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Total Volume of white matter hyperintensities (from T1 and T2 FLAIR images) neuroimaging measurement,
white matter hyperintensity measurement
355
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001534/ScoringFiles/PGS001534.txt.gz
PGS001533
(GBE_QT_FC1004803)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Tinnitus severity Tinnitus 343
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001533/ScoringFiles/PGS001533.txt.gz
PGS001532
(GBE_QT_FC10003466)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Time from waking to first cigarette smoking behavior trait 86
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001532/ScoringFiles/PGS001532.txt.gz
PGS001531
(GBE_INI4122)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Speed of sound through heel (R) heel bone mineral density 8,912
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001531/ScoringFiles/PGS001531.txt.gz
PGS001530
(GBE_INI4103)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Speed of sound through heel (L) heel bone mineral density 8,419
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001530/ScoringFiles/PGS001530.txt.gz
PGS001529
(GBE_INI3146)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Speed of sound through heel heel bone mineral density 13,172
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001529/ScoringFiles/PGS001529.txt.gz
PGS001528
(GBE_INI30250)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Reticulocyte count reticulocyte count 6,262
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001528/ScoringFiles/PGS001528.txt.gz
PGS001527
(GBE_INI22332)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
QTc interval (QT interval according to Bazett) QT interval 115
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001527/ScoringFiles/PGS001527.txt.gz
PGS001526
(GBE_INI22331)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
QT interval QT interval 609
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001526/ScoringFiles/PGS001526.txt.gz
PGS001525
(GBE_INI12340)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
QRS duration QRS duration 401
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001525/ScoringFiles/PGS001525.txt.gz
PGS001524
(GBE_INI95)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Pulse rate (during blood-pressure measurement) heart rate 765
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001524/ScoringFiles/PGS001524.txt.gz
PGS001523
(GBE_INI4194)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Pulse rate heart rate 4,117
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001523/ScoringFiles/PGS001523.txt.gz
PGS001522
(GBE_HC1213)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Psoriatic and enteropathic arthropathies (time-to-event) Arthropathy 17
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001522/ScoringFiles/PGS001522.txt.gz
PGS001521
(GBE_INI22330)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
PQ interval PR interval 391
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001521/ScoringFiles/PGS001521.txt.gz
PGS001520
(GBE_INI4198)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Position of the pulse wave peak arterial stiffness measurement 1,358
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001520/ScoringFiles/PGS001520.txt.gz
PGS001519
(GBE_INI4199)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Position of pulse wave notch arterial stiffness measurement 693
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001519/ScoringFiles/PGS001519.txt.gz
PGS001518
(GBE_INI100010)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Portion size diet measurement 591
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001518/ScoringFiles/PGS001518.txt.gz
PGS001517
(GBE_INI30090)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Platelet crit platelet crit 20,910
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001517/ScoringFiles/PGS001517.txt.gz
PGS001516
(GBE_HC1112)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Other diseases of intestine (time-to-event) intestinal disorder 90
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001516/ScoringFiles/PGS001516.txt.gz
PGS001515
(GBE_INI3456)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Number of cigarettes currently smoked daily (current cigarette smokers) cigarettes per day measurement 9
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001515/ScoringFiles/PGS001515.txt.gz
PGS001514
(GBE_INI87)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Non-cancer illness year/age first occurred disease 273
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001514/ScoringFiles/PGS001514.txt.gz
PGS001513
(GBE_INI25027)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Median T2star in thalamus (R) neuroimaging measurement 114
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001513/ScoringFiles/PGS001513.txt.gz
PGS001512
(GBE_INI25031)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Median T2star in putamen (R) neuroimaging measurement 2,474
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001512/ScoringFiles/PGS001512.txt.gz
PGS001511
(GBE_INI25030)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Median T2star in putamen (L) neuroimaging measurement 1,922
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001511/ScoringFiles/PGS001511.txt.gz
PGS001510
(GBE_INI25033)
PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
Median T2star in pallidum (R) neuroimaging measurement 2,164
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001510/ScoringFiles/PGS001510.txt.gz