Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003216
(ExPRSweb_SleepApnea_finngen-R4-G6-SLEEPAPNO_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Sleep apnea sleep apnea syndrome 688
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003216/ScoringFiles/PGS003216.txt.gz
PGS001048
(GBE_HC1576)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 NSTEMI (algorithmically-defined) Non-ST Elevation Myocardial Infarction 687
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001048/ScoringFiles/PGS001048.txt.gz
PGS001612
(GBE_INI25890)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Ventral Striatum (L) neuroimaging measurement,
grey matter volume measurement		 687
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001612/ScoringFiles/PGS001612.txt.gz
PGS000176
(mcv)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean corpuscular volume erythrocyte volume 685
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000176/ScoringFiles/PGS000176.txt.gz
PGS001726
(GBE_INI25619)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L2 in tract superior thalamic radiation (L) neuroimaging measurement,
brain volume		 683
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001726/ScoringFiles/PGS001726.txt.gz
PGS000187
(rbc)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Red blood cell count erythrocyte count 678
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000187/ScoringFiles/PGS000187.txt.gz
PGS001624
(GBE_INI25908)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in VIIb Cerebellum (R) neuroimaging measurement,
grey matter volume measurement		 673
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001624/ScoringFiles/PGS001624.txt.gz
PGS002573
(disease_T2D.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 673
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002573/ScoringFiles/PGS002573.txt.gz
PGS003382
(best_SKCM)
 PGP000413 |
Namba S et al. Cancer Res (2022)
 Skin cutaneous melanoma cutaneous melanoma 672
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003382/ScoringFiles/PGS003382.txt.gz
PGS002591
(disease_ALLERGY_ECZEMA_DIAGNOSED.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Eczema Eczematoid dermatitis 667
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002591/ScoringFiles/PGS002591.txt.gz
PGS001504
(GBE_INI25452)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in superior cerebellar peduncle on FA skeleton (R) neuroimaging measurement,
brain volume		 666
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001504/ScoringFiles/PGS001504.txt.gz
PGS001374
(GBE_INI2897)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Age stopped smoking smoking cessation 663
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001374/ScoringFiles/PGS001374.txt.gz
PGS001675
(GBE_INI25667)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract medial lemniscus (L) neuroimaging measurement,
brain volume		 663
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001675/ScoringFiles/PGS001675.txt.gz
PGS001091
(GBE_BIN2020)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Loneliness loneliness measurement 660
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001091/ScoringFiles/PGS001091.txt.gz
PGS001398
(GBE_QT_FC1004570)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Friendship satisfaction friendship satisfaction measurement 659
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001398/ScoringFiles/PGS001398.txt.gz
PGS002566
(disease_RESPIRATORY_ENT.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Respiratory and ear-nose-throat diseases respiratory system disorder 658
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002566/ScoringFiles/PGS002566.txt.gz
PGS000628
(PRSWEB_PHECODE193_C3-THYROID-GLAND_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Thyroid cancer thyroid gland carcinoma 656
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000628/ScoringFiles/PGS000628.txt.gz
PGS001322
(GBE_HC276)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Glaucoma glaucoma 655
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001322/ScoringFiles/PGS001322.txt.gz
PGS000179
(mpv)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean platelet volume platelet volume 654
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000179/ScoringFiles/PGS000179.txt.gz
PGS001823
(portability-PLR_275.1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Disorders of iron metabolism iron metabolism disease 654
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001823/ScoringFiles/PGS001823.txt.gz
PGS001552
(GBE_INI25841)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Cingulate Gyrus, posterior division (R) neuroimaging measurement,
grey matter volume measurement		 652
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001552/ScoringFiles/PGS001552.txt.gz
PGS001623
(GBE_INI25906)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in VIIb Cerebellum (L) neuroimaging measurement,
grey matter volume measurement		 649
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001623/ScoringFiles/PGS001623.txt.gz
PGS001537
(GBE_INI25023)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of accumbens (L) neuroimaging measurement,
nucleus accumbens volume		 647
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001537/ScoringFiles/PGS001537.txt.gz
PGS001538
(GBE_INI25024)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of accumbens (R) neuroimaging measurement,
nucleus accumbens volume		 643
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001538/ScoringFiles/PGS001538.txt.gz
PGS002612
(disease_PSORIASIS.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Psoriasis psoriasis 643
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002612/ScoringFiles/PGS002612.txt.gz
PGS001492
(GBE_INI25388)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in uncinate fasciculus on FA skeleton (R) neuroimaging measurement,
brain volume		 641
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001492/ScoringFiles/PGS001492.txt.gz
PGS001906
(portability-PLR_ECG_QTC_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 QTc interval QT interval 641
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001906/ScoringFiles/PGS001906.txt.gz
PGS003256
(ExPRSweb_Creatine_eGFRcrea-overall-EA_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 641
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003256/ScoringFiles/PGS003256.txt.gz
PGS001902
(portability-PLR_ECG_P_duration)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 P duration P wave duration 640
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001902/ScoringFiles/PGS001902.txt.gz
PGS000177
(mono)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Monocyte count monocyte count 638
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000177/ScoringFiles/PGS000177.txt.gz
PGS002584
(disease_CARDIOVASCULAR.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Cardiovascular disease cardiovascular disorder 637
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002584/ScoringFiles/PGS002584.txt.gz
PGS000191
(wbc)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 White blood cell count leukocyte quantity 636
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000191/ScoringFiles/PGS000191.txt.gz
PGS001620
(GBE_INI25919)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Vermis X Cerebellum neuroimaging measurement,
grey matter volume measurement		 636
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001620/ScoringFiles/PGS001620.txt.gz
PGS000967
(GBE_HC1221)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Coxarthrosis [arthrosis of hip] (time-to-event) osteoarthritis, hip 634
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000967/ScoringFiles/PGS000967.txt.gz
PGS001547
(GBE_INI25892)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Brain-Stem neuroimaging measurement,
grey matter volume measurement		 632
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001547/ScoringFiles/PGS001547.txt.gz
PGS002870
(ExPRSweb_CRP_30710-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 C-reactive protein C-reactive protein measurement 630
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002870/ScoringFiles/PGS002870.txt.gz
PGS005315
(ALM_PRS)
 PGP000766 |
Türkmen D et al. Pharmacogenomics J (2024)
 Appendicular lean mass lean body mass 630
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005315/ScoringFiles/PGS005315.txt.gz
PGS000180
(mrv)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean reticulocyte volume mean reticulocyte volume 629
-
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000180/ScoringFiles/PGS000180.txt.gz
PGS000174
(mch)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean corpuscular hemoglobin mean corpuscular hemoglobin 628
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000174/ScoringFiles/PGS000174.txt.gz
PGS001495
(GBE_INI25443)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in body of corpus callosum on FA skeleton neuroimaging measurement,
brain volume		 627
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001495/ScoringFiles/PGS001495.txt.gz
PGS000860
(eGFR)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Estimated glomerular filtration rate glomerular filtration rate 625
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000860/ScoringFiles/PGS000860.txt.gz
PGS000172
(lymph)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Lymphocyte count lymphocyte count 621
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000172/ScoringFiles/PGS000172.txt.gz
PGS001566
(GBE_INI25894)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in I-IV Cerebellum (R) neuroimaging measurement,
grey matter volume measurement		 612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001566/ScoringFiles/PGS001566.txt.gz
PGS001616
(GBE_INI25898)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Vermis VI Cerebellum neuroimaging measurement,
grey matter volume measurement		 612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001616/ScoringFiles/PGS001616.txt.gz
PGS001755
(GBE_INI25538)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MD in tract superior thalamic radiation (L) neuroimaging measurement,
brain volume		 610
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001755/ScoringFiles/PGS001755.txt.gz
PGS001526
(GBE_INI22331)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 QT interval QT interval 609
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001526/ScoringFiles/PGS001526.txt.gz
PGS000165
(eo)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Eosinophil count eosinophil count 607
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000165/ScoringFiles/PGS000165.txt.gz
PGS003191
(ExPRSweb_VitD_30890-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D level 605
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003191/ScoringFiles/PGS003191.txt.gz
PGS001292
(GBE_FH1044)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Family history of prostate cancer family history of prostate cancer 602
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001292/ScoringFiles/PGS001292.txt.gz
PGS001676
(GBE_INI25668)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract medial lemniscus (R) neuroimaging measurement,
brain volume		 600
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001676/ScoringFiles/PGS001676.txt.gz
Showing 3851 to 3900 of 5337 rows