Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001707
(GBE_INI25583)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract inferior longitudinal fasciculus (L) neuroimaging measurement,
brain volume		 499
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001707/ScoringFiles/PGS001707.txt.gz
PGS001334
(GBE_HC1035)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other chronic obstructive pulmonary disease (time-to-event) chronic obstructive pulmonary disease 498
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001334/ScoringFiles/PGS001334.txt.gz
PGS001860
(portability-PLR_571.5)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Other chronic nonalcoholic liver disease liver disease 497
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001860/ScoringFiles/PGS001860.txt.gz
PGS003640
(R_CA4_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 body volume hippocampal CA4 volume 497
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003640/ScoringFiles/PGS003640.txt.gz
PGS003190
(ExPRSweb_VitD_30890-irnt_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D level 495
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003190/ScoringFiles/PGS003190.txt.gz
PGS000182
(neut)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Neutrophil count neutrophil count 492
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000182/ScoringFiles/PGS000182.txt.gz
PGS001831
(portability-PLR_335)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Multiple sclerosis multiple sclerosis 491
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001831/ScoringFiles/PGS001831.txt.gz
PGS001578
(GBE_INI25789)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Middle Frontal Gyrus (R) neuroimaging measurement,
grey matter volume measurement		 489
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001578/ScoringFiles/PGS001578.txt.gz
PGS001894
(portability-PLR_celiac_gluten)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Diagnosed with coeliac disease or gluten sensitivity celiac disease 484
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001894/ScoringFiles/PGS001894.txt.gz
PGS001332
(GBE_HC442)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Chronic obstructive pulmonary disease chronic obstructive pulmonary disease 482
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001332/ScoringFiles/PGS001332.txt.gz
PGS002596
(biochemistry_Glucose.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Glucose glucose measurement 482
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002596/ScoringFiles/PGS002596.txt.gz
PGS005095
(WHRadjBMI_GRS)
 PGP000686 |
Christiansen MR et al. Diabetes (2023)
 WHR adjusted for BMI BMI-adjusted waist-hip ratio 481
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005095/ScoringFiles/PGS005095.txt.gz
PGS001303
(GBE_HC872)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other cataract (time-to-event) cataract 480
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001303/ScoringFiles/PGS001303.txt.gz
PGS001444
(GBE_INI25098)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in superior fronto-occipital fasciculus on FA skeleton (R) neuroimaging measurement,
brain volume		 480
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001444/ScoringFiles/PGS001444.txt.gz
PGS001691
(GBE_INI25708)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ISOVF in tract cingulate gyrus part of cingulum (L) neuroimaging measurement,
brain volume		 477
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001691/ScoringFiles/PGS001691.txt.gz
PGS000173
(lymph_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Lymphocyte percentage of white cells lymphocyte percentage of leukocytes 472
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000173/ScoringFiles/PGS000173.txt.gz
PGS002561
(mental_NEUROTICISM.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Neuroticism neuroticism measurement 469
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002561/ScoringFiles/PGS002561.txt.gz
PGS000439
(PRSWEB_PHECODE172.2_C44_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Other non-epithelial skin cancer skin cancer 467
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000439/ScoringFiles/PGS000439.txt.gz
PGS001286
(GBE_BIN22126)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Allergic disease (hay fever or allergic rhinitis) (diagnosed by doctor) allergic disease 466
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001286/ScoringFiles/PGS001286.txt.gz
PGS001500
(GBE_INI25467)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in posterior corona radiata on FA skeleton (L) neuroimaging measurement,
brain volume		 466
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001500/ScoringFiles/PGS001500.txt.gz
PGS003427
(lvmi)
 PGP000434 |
Khurshid S et al. Nat Commun (2023)
 Left ventricular mass index (LVMI) left ventricular mass index 465
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003427/ScoringFiles/PGS003427.txt.gz
PGS004930
(celiac_disease_snpnet_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 Celiac disease celiac disease 463
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004930/ScoringFiles/PGS004930.txt.gz
PGS000299
(GRS462_WHRadjBMI)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Waist-to-hip ratio (body mass index adjusted) BMI-adjusted waist-hip ratio 462
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000299/ScoringFiles/PGS000299.txt.gz
PGS003416
(MTAGPRS)
 PGP000429 |
Seviiri M et al. Nat Commun (2022)
 Basal cell carcinoma (MTAG) basal cell carcinoma 462
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003416/ScoringFiles/PGS003416.txt.gz
PGS003659
(L_hippocampal_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left hippocampal body volume hippocampal volume 462
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003659/ScoringFiles/PGS003659.txt.gz
PGS001873
(portability-PLR_704)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Diseases of hair and hair follicles disorder of pilosebaceous unit 461
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001873/ScoringFiles/PGS001873.txt.gz
PGS003275
(ExPRSweb_Creatine_eGFRcrea-overall-IV-2GC_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 458
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003275/ScoringFiles/PGS003275.txt.gz
PGS003276
(ExPRSweb_Creatine_eGFRcrea-overall-IV-2GC_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 458
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003276/ScoringFiles/PGS003276.txt.gz
PGS001711
(GBE_INI25592)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract superior thalamic radiation (L) neuroimaging measurement,
brain volume		 457
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001711/ScoringFiles/PGS001711.txt.gz
PGS001138
(GBE_BIN10030820)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Rheumatoid factor [> 16 IU/mL] rheumatoid factor measurement 456
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001138/ScoringFiles/PGS001138.txt.gz
PGS001435
(GBE_INI25076)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in retrolenticular part of internal capsule on FA skeleton (R) neuroimaging measurement,
brain volume		 456
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001435/ScoringFiles/PGS001435.txt.gz
PGS003765
(GRS.PCa.451)
 PGP000488 |
Wang A W et al. Nature Genetics (2023)
 Prostate cancer prostate carcinoma 451
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003765/ScoringFiles/PGS003765.txt.gz
PGS003766
(GRS.PCa.451.TOPMed)
 PGP000488 |
Wang A W et al. Nature Genetics (2023)
 Prostate cancer prostate carcinoma 451
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003766/ScoringFiles/PGS003766.txt.gz
PGS001015
(GBE_HC85)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Enlarged prostate prostate disease 449
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001015/ScoringFiles/PGS001015.txt.gz
PGS001678
(GBE_INI25656)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract parahippocampal part of cingulum (L) neuroimaging measurement,
brain volume		 449
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001678/ScoringFiles/PGS001678.txt.gz
PGS005099
(psa2024_prs_447)
 PGP000692 |
Hoffmann TJ et al. Nat Genet (2025)
 Prostate specific antigen prostate specific antigen amount 447
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005099/ScoringFiles/PGS005099.txt.gz
PGS000435
(PRSWEB_PHECODE172.2_C3-OTHER-SKIN_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Other non-epithelial skin cancer skin cancer 446
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000435/ScoringFiles/PGS000435.txt.gz
PGS001601
(GBE_INI25874)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Supracalcarine Cortex (L) neuroimaging measurement,
grey matter volume measurement		 446
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001601/ScoringFiles/PGS001601.txt.gz
PGS004652
(logTG_AFR_lassosum2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Log triglycerides triglyceride measurement 446
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004652/ScoringFiles/PGS004652.txt.gz
PGS000940
(GBE_HC1132)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Intestinal malabsorption (time-to-event) Malabsorption 443
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000940/ScoringFiles/PGS000940.txt.gz
PGS001630
(GBE_INI25019)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of hippocampus (L) neuroimaging measurement,
hippocampal volume		 442
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001630/ScoringFiles/PGS001630.txt.gz
PGS003862
(multiancestry_LF_GRS_FF_weights_EUR)
 PGP000500 |
Shrine N et al. Nat Genet (2023)
 Lung function (FEV1/FVC) FEV/FVC ratio 442
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003862/ScoringFiles/PGS003862.txt.gz
PGS000183
(neut_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Neutrophil percentage of white cells neutrophil percentage of leukocytes 437
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000183/ScoringFiles/PGS000183.txt.gz
PGS003863
(multiancestry_LF_GRS_FF_weights_AFR)
 PGP000500 |
Shrine N et al. Nat Genet (2023)
 Lung function (FEV1/FVC) FEV/FVC ratio 437
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003863/ScoringFiles/PGS003863.txt.gz
PGS000419
(PRSWEB_PHECODE172.1_C43_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Melanomas of skin (diagnosis or history) melanoma 436
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000419/ScoringFiles/PGS000419.txt.gz
PGS001345
(GBE_BIN22127)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Asthma (diagnosed by doctor) asthma 435
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001345/ScoringFiles/PGS001345.txt.gz
PGS003864
(multiancestry_LF_GRS_FF_weights_AMR)
 PGP000500 |
Shrine N et al. Nat Genet (2023)
 Lung function (FEV1/FVC) FEV/FVC ratio 434
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003864/ScoringFiles/PGS003864.txt.gz
PGS000933
(GBE_HC1024)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Nasal polyp (time-to-event) Nasal polyposis 433
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000933/ScoringFiles/PGS000933.txt.gz
PGS001125
(GBE_BIN_FC20001508)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Coffee consumption (instant coffee) coffee consumption measurement 432
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001125/ScoringFiles/PGS001125.txt.gz
PGS001731
(GBE_INI25626)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L3 in tract anterior thalamic radiation (R) neuroimaging measurement,
brain volume		 432
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001731/ScoringFiles/PGS001731.txt.gz
Showing 3851 to 3900 of 5198 rows