Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000077
(CC_LL)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Lymphocytic leukemia lymphoid leukemia 75
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000077/ScoringFiles/PGS000077.txt.gz
PGS000788
(CC_LL_IV)
 PGP000186 |
Kachuri L et al. Nat Commun (2020)
 Lymphocytic leukemia lymphoid leukemia 75
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000788/ScoringFiles/PGS000788.txt.gz
PGS005270
(lymphocytic_thyroiditis_mixed_pt)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Lymphocytic thyroiditis Hashimoto thyroiditis 55
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005270/ScoringFiles/PGS005270.txt.gz
PGS005271
(lymphocytic_thyroiditis_mixed_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Lymphocytic thyroiditis Hashimoto thyroiditis 1,085,156
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005271/ScoringFiles/PGS005271.txt.gz
PGS005272
(lymphocytic_thyroiditis_eur_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Lymphocytic thyroiditis Hashimoto thyroiditis 1,085,142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005272/ScoringFiles/PGS005272.txt.gz
PGS000645
(PRSWEB_PHECODE204.1_C-LYMPHOID-LEUKAEMIA_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Lymphoid leukemia lymphoid leukemia 6
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000645/ScoringFiles/PGS000645.txt.gz
PGS004477
(disease.M13.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M13 (Other arthritis) arthritic joint disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004477/ScoringFiles/PGS004477.txt.gz
PGS004547
(meta.M13.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M13 (Other arthritis) arthritic joint disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004547/ScoringFiles/PGS004547.txt.gz
PGS004478
(disease.M16.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M16 (Coxarthrosis [arthrosis of hip]) osteoarthritis, hip 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004478/ScoringFiles/PGS004478.txt.gz
PGS004548
(meta.M16.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M16 (Coxarthrosis [arthrosis of hip]) osteoarthritis, hip 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004548/ScoringFiles/PGS004548.txt.gz
PGS004479
(disease.M17.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M17 (Gonarthrosis [arthrosis of knee]) osteoarthritis, knee 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004479/ScoringFiles/PGS004479.txt.gz
PGS004549
(meta.M17.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M17 (Gonarthrosis [arthrosis of knee]) osteoarthritis, knee 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004549/ScoringFiles/PGS004549.txt.gz
PGS004480
(disease.M19.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M19 (Other arthrosis) arthropathy 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004480/ScoringFiles/PGS004480.txt.gz
PGS004550
(meta.M19.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M19 (Other arthrosis) arthropathy 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004550/ScoringFiles/PGS004550.txt.gz
PGS004481
(disease.M20.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M20 (Acquired deformities of fingers and toes) congenital deformities of limbs 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004481/ScoringFiles/PGS004481.txt.gz
PGS004551
(meta.M20.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M20 (Acquired deformities of fingers and toes) congenital deformities of limbs 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004551/ScoringFiles/PGS004551.txt.gz
PGS004482
(disease.M23.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M23 (Internal derangement of knee) knee injury 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004482/ScoringFiles/PGS004482.txt.gz
PGS004552
(meta.M23.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M23 (Internal derangement of knee) knee injury 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004552/ScoringFiles/PGS004552.txt.gz
PGS004483
(disease.M25.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M25 (Other joint disorders, not elsewhere classified) arthropathy 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004483/ScoringFiles/PGS004483.txt.gz
PGS004553
(meta.M25.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M25 (Other joint disorders, not elsewhere classified) arthropathy 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004553/ScoringFiles/PGS004553.txt.gz
PGS004484
(disease.M47.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M47 (Spondylosis) spondylosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004484/ScoringFiles/PGS004484.txt.gz
PGS004554
(meta.M47.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M47 (Spondylosis) spondylosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004554/ScoringFiles/PGS004554.txt.gz
PGS004485
(disease.M48.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M48 (Other spondylopathies) spondylosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004485/ScoringFiles/PGS004485.txt.gz
PGS004555
(meta.M48.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M48 (Other spondylopathies) spondylosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004555/ScoringFiles/PGS004555.txt.gz
PGS004486
(disease.M51.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M51 (Other intervertebral disk disorders) Intervertebral Disc Displacement 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004486/ScoringFiles/PGS004486.txt.gz
PGS004556
(meta.M51.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M51 (Other intervertebral disk disorders) Intervertebral Disc Displacement 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004556/ScoringFiles/PGS004556.txt.gz
PGS004487
(disease.M54.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M54 (Dorsalgia) Back pain 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004487/ScoringFiles/PGS004487.txt.gz
PGS004557
(meta.M54.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M54 (Dorsalgia) Back pain 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004557/ScoringFiles/PGS004557.txt.gz
PGS004488
(disease.M75.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M75 (Shoulder lesions) soft tissue disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004488/ScoringFiles/PGS004488.txt.gz
PGS004558
(meta.M75.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M75 (Shoulder lesions) soft tissue disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004558/ScoringFiles/PGS004558.txt.gz
PGS004489
(disease.M79.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M79 (Other soft tissue disorders, not elsewhere classified) soft tissue disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004489/ScoringFiles/PGS004489.txt.gz
PGS004559
(meta.M79.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M79 (Other soft tissue disorders, not elsewhere classified) soft tissue disease 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004559/ScoringFiles/PGS004559.txt.gz
PGS004490
(disease.M81.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M81 (Osteoporosis without pathological fracture) osteoporosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004490/ScoringFiles/PGS004490.txt.gz
PGS004560
(meta.M81.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 M81 (Osteoporosis without pathological fracture) osteoporosis 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004560/ScoringFiles/PGS004560.txt.gz
PGS000225
(CSF-1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Macrophage colony-stimulating factor 1 (CSF-1) serum levels blood protein amount 552,163
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000225/ScoringFiles/PGS000225.txt.gz
PGS001013
(GBE_BIN_FC5006148)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Macular degeneration macular degeneration 53
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001013/ScoringFiles/PGS001013.txt.gz
PGS001834
(portability-PLR_362.29)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Macular degeneration (senile) of retina NOS age-related macular degeneration 157
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001834/ScoringFiles/PGS001834.txt.gz
PGS002041
(portability-ldpred2_362.29)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Macular degeneration (senile) of retina NOS age-related macular degeneration 116,538
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002041/ScoringFiles/PGS002041.txt.gz
PGS019031
(TPMI_362.29_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular degeneration senile of retina NOS macular degeneration 222
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019031/ScoringFiles/PGS019031.txt.gz
PGS019032
(TPMI_362.29_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular degeneration senile of retina NOS macular degeneration 939,874
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019032/ScoringFiles/PGS019032.txt.gz
PGS019033
(TPMI_362.29_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular degeneration senile of retina NOS macular degeneration 21,742
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019033/ScoringFiles/PGS019033.txt.gz
PGS019034
(TPMI_362.29_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular degeneration senile of retina NOS macular degeneration 983,811
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019034/ScoringFiles/PGS019034.txt.gz
PGS019035
(TPMI_362.29_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular degeneration senile of retina NOS macular degeneration 1,000,676
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019035/ScoringFiles/PGS019035.txt.gz
PGS019026
(TPMI_362.26_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular puckering of retina degeneration of macula and posterior pole 5,750
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019026/ScoringFiles/PGS019026.txt.gz
PGS019027
(TPMI_362.26_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular puckering of retina degeneration of macula and posterior pole 337,189
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019027/ScoringFiles/PGS019027.txt.gz
PGS019028
(TPMI_362.26_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular puckering of retina degeneration of macula and posterior pole 15,945
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019028/ScoringFiles/PGS019028.txt.gz
PGS019029
(TPMI_362.26_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular puckering of retina degeneration of macula and posterior pole 983,768
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019029/ScoringFiles/PGS019029.txt.gz
PGS019030
(TPMI_362.26_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Macular puckering of retina degeneration of macula and posterior pole 1,009,853
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019030/ScoringFiles/PGS019030.txt.gz
PGS000193
(MDD_0.001_Coleman_2020)
 PGP000080 |
Coleman JRI et al. Mol Psychiatry (2020)
 Major depression major depressive disorder 1,138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000193/ScoringFiles/PGS000193.txt.gz
PGS000907
(PRS_MDD)
 PGP000238 |
Campos AI et al. Commun Med (Lond) (2021)
 Major depressive disorder major depressive disorder 1,773,528
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000907/ScoringFiles/PGS000907.txt.gz
Showing 3851 to 3900 of 6972 rows