Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003271
(ExPRSweb_Creatine_eGFRcrea-overall-EA_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 600
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003271/ScoringFiles/PGS003271.txt.gz
PGS004301
(GenoBoost_colorectal_cancer_1)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 600
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004301/ScoringFiles/PGS004301.txt.gz
PGS000944
(GBE_HC261)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Eczema, dermatitis Eczematoid dermatitis,
dermatitis		 598
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000944/ScoringFiles/PGS000944.txt.gz
PGS001438
(GBE_INI25060)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in splenium of corpus callosum on FA skeleton neuroimaging measurement,
brain volume		 598
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001438/ScoringFiles/PGS001438.txt.gz
PGS002540
(disease_DIABETES_ANY_DIAGNOSED.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Diabetes (any type) diabetes mellitus 598
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002540/ScoringFiles/PGS002540.txt.gz
PGS001652
(GBE_INI25500)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA FA in tract inferior fronto-occipital fasciculus (L) neuroimaging measurement,
brain volume		 597
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001652/ScoringFiles/PGS001652.txt.gz
PGS001847
(portability-PLR_459.9)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Circulatory disease NEC vascular disorder 594
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001847/ScoringFiles/PGS001847.txt.gz
PGS003624
(R_CA3_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 head volume hippocampal CA3 volume 594
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003624/ScoringFiles/PGS003624.txt.gz
PGS001559
(GBE_INI25847)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Frontal Orbital Cortex (R) neuroimaging measurement,
grey matter volume measurement		 592
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001559/ScoringFiles/PGS001559.txt.gz
PGS001518
(GBE_INI100010)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Portion size diet measurement 591
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001518/ScoringFiles/PGS001518.txt.gz
PGS000804
(GRS582_T2Dmulti)
 PGP000193 |
Polfus LM et al. HGG Adv (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 582
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000804/ScoringFiles/PGS000804.txt.gz - Check Terms/Licenses
PGS000805
(GRS582_T2Deur)
 PGP000193 |
Polfus LM et al. HGG Adv (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 582
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000805/ScoringFiles/PGS000805.txt.gz - Check Terms/Licenses
PGS000806
(GRS582_T2Dafr)
 PGP000193 |
Polfus LM et al. HGG Adv (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 582
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000806/ScoringFiles/PGS000806.txt.gz - Check Terms/Licenses
PGS000807
(GRS582_T2Dasn)
 PGP000193 |
Polfus LM et al. HGG Adv (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 582
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000807/ScoringFiles/PGS000807.txt.gz - Check Terms/Licenses
PGS000808
(GRS582_T2Dhis)
 PGP000193 |
Polfus LM et al. HGG Adv (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 582
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000808/ScoringFiles/PGS000808.txt.gz - Check Terms/Licenses
PGS000904
(PRS582_PR)
 PGP000236 |
Ntalla I et al. Nat Commun (2020)
 PR interval PR interval 582
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000904/ScoringFiles/PGS000904.txt.gz
PGS001575
(GBE_INI25825)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Lateral Occipital Cortex, superior division (R) neuroimaging measurement,
grey matter volume measurement		 581
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001575/ScoringFiles/PGS001575.txt.gz
PGS001290
(GBE_HC376)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Osteoarthritis osteoarthritis 579
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001290/ScoringFiles/PGS001290.txt.gz
PGS004126
(pt_clump_nested.CV.GCST007140.HDL)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 HDL cholesterol high density lipoprotein cholesterol measurement 579
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004126/ScoringFiles/PGS004126.txt.gz
PGS001313
(GBE_HC1159)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Psoriasis (time-to-event) psoriasis 578
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001313/ScoringFiles/PGS001313.txt.gz
PGS001752
(GBE_INI25529)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MD in tract inferior longitudinal fasciculus (L) neuroimaging measurement,
brain volume		 572
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001752/ScoringFiles/PGS001752.txt.gz
PGS000166
(eo_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Eosinophil percentage of white cells eosinophil percentage of leukocytes 571
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000166/ScoringFiles/PGS000166.txt.gz
PGS000169
(hlr)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 High light scatter reticulocyte count reticulocyte count 570
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000169/ScoringFiles/PGS000169.txt.gz
PGS001333
(GBE_HC1582)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Chronic obstructive pulmonary disease (algorithmically-defined) chronic obstructive pulmonary disease 569
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001333/ScoringFiles/PGS001333.txt.gz
PGS000170
(hlr_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 High light scatter reticulocyte percentage of red cells reticulocyte count 566
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000170/ScoringFiles/PGS000170.txt.gz
PGS001874
(portability-PLR_706.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Sebaceous cyst Epidermal Inclusion Cyst 563
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001874/ScoringFiles/PGS001874.txt.gz
PGS001594
(GBE_INI25883)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Putamen (R) neuroimaging measurement,
grey matter volume measurement		 562
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001594/ScoringFiles/PGS001594.txt.gz
PGS002537
(other_MORNINGPERSON.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Chronotype (morning person) chronotype measurement 562
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002537/ScoringFiles/PGS002537.txt.gz
PGS000717
(PGS557_albs)
 PGP000132 |
Richardson TG et al. BMJ (2020)
 Adult life body size body mass index 557
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000717/ScoringFiles/PGS000717.txt.gz
PGS000185
(pdw)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Platelet distribution width platelet component distribution width 555
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000185/ScoringFiles/PGS000185.txt.gz
PGS000189
(ret)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Reticulocyte count reticulocyte count 555
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000189/ScoringFiles/PGS000189.txt.gz
PGS001336
(GBE_cancer1002)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Breast cancer breast carcinoma 555
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001336/ScoringFiles/PGS001336.txt.gz
PGS001501
(GBE_INI25469)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in posterior thalamic radiation on FA skeleton (L) neuroimaging measurement,
brain volume		 554
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001501/ScoringFiles/PGS001501.txt.gz
PGS001278
(GBE_BIN_FC12006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 previously: Blood clot in the leg (DVT) or lung deep vein thrombosis,
pulmonary embolism		 551
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001278/ScoringFiles/PGS001278.txt.gz
PGS002604
(disease_HYPOTHYROIDISM_SELF_REP.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Hypothyroidism hypothyroidism 550
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002604/ScoringFiles/PGS002604.txt.gz
PGS000178
(mono_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Monocyte percentage of white cells monocyte percentage of leukocytes 549
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000178/ScoringFiles/PGS000178.txt.gz
PGS000660
(PRS-HDL)
 PGP000121 |
Tam CHT et al. Genome Med (2021)
 HDL cholesterol high density lipoprotein cholesterol measurement 549
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000660/ScoringFiles/PGS000660.txt.gz
PGS002619
(disease_THYROID_ANY_SELF_REP.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Thyroid (self-reported conditions) thyroid gland disorder 548
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002619/ScoringFiles/PGS002619.txt.gz
PGS001705
(GBE_INI25581)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract inferior fronto-occipital fasciculus (L) neuroimaging measurement,
brain volume		 547
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001705/ScoringFiles/PGS001705.txt.gz
PGS000188
(rdw)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Red cell distribution width Red cell distribution width 546
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000188/ScoringFiles/PGS000188.txt.gz
PGS002602
(disease_HI_CHOL_SELF_REP.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 High cholesterol Hypercholesterolemia 545
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002602/ScoringFiles/PGS002602.txt.gz
PGS002262
(metaPRS_CAD)
 PGP000289 |
Lu X et al. Eur Heart J (2022)
 Coronary artery disease coronary artery disorder 540
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002262/ScoringFiles/PGS002262.txt.gz
PGS002539
(disease_DERMATOLOGY.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Dermatologic diseases skin disorder 540
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002539/ScoringFiles/PGS002539.txt.gz
PGS001700
(GBE_INI25727)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ISOVF in tract superior thalamic radiation (L) neuroimaging measurement,
brain volume		 538
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001700/ScoringFiles/PGS001700.txt.gz
PGS000190
(ret_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Reticulocyte fraction of red cells reticulocyte count 537
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000190/ScoringFiles/PGS000190.txt.gz
PGS000931
(GBE_BIN_FC11006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Blood clot or deep vein thrombosis (diagnosed by doctor) deep vein thrombosis,
thrombotic disease		 534
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000931/ScoringFiles/PGS000931.txt.gz
PGS001386
(GBE_INI21049)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Degree bothered by pain in arms/legs/joints in the past 3 months health-related quality of life measurement 534
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001386/ScoringFiles/PGS001386.txt.gz
PGS001710
(GBE_INI25591)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract superior longitudinal fasciculus (R) neuroimaging measurement,
brain volume		 534
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001710/ScoringFiles/PGS001710.txt.gz
PGS002259
(metaPRS_Stroke)
 PGP000285 |
Lu X et al. Neurology (2021)
 Stroke stroke disorder 534
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002259/ScoringFiles/PGS002259.txt.gz
PGS001600
(GBE_INI25800)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Superior Temporal Gyrus, posterior division (L) neuroimaging measurement,
grey matter volume measurement		 530
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001600/ScoringFiles/PGS001600.txt.gz
Showing 3901 to 3950 of 5337 rows