Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001844
(portability-PLR_451)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Phlebitis and thrombophlebitis Phlebitis,
Thrombophlebitis		 431
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001844/ScoringFiles/PGS001844.txt.gz
PGS001301
(GBE_HC303)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Malabsorption/coeliac disease celiac disease 428
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001301/ScoringFiles/PGS001301.txt.gz
PGS002275
(SBP-PRS)
 PGP000303 |
Groenland EH et al. Atherosclerosis (2022)
 Systolic blood pressure systolic blood pressure 425
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002275/ScoringFiles/PGS002275.txt.gz
PGS004602
(PRS424_T2D)
 PGP000580 |
Zhuang P et al. Diabetes Care (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 424
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004602/ScoringFiles/PGS004602.txt.gz
PGS001114
(GBE_BIN_FC8006154)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ibuprofen use, self-reported NSAID use measurement,
self-reported trait		 419
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001114/ScoringFiles/PGS001114.txt.gz
PGS003281
(ExPRSweb_CysC_30720-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 415
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003281/ScoringFiles/PGS003281.txt.gz
PGS002295
(GRS413_IGF-1)
 PGP000325 |
Tsai CW et al. American Journal of Cancer Research (2022)
 Insulin growth-like factor-1 level insulin-like protein level 413
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002295/ScoringFiles/PGS002295.txt.gz
PGS003865
(multiancestry_LF_GRS_FF_weights_EAS)
 PGP000500 |
Shrine N et al. Nat Genet (2023)
 Lung function (FEV1/FVC) FEV/FVC ratio 406
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003865/ScoringFiles/PGS003865.txt.gz
PGS003195
(ExPRSweb_VitD_30890-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D level 404
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003195/ScoringFiles/PGS003195.txt.gz
PGS005316
(BFM_PRS)
 PGP000766 |
Türkmen D et al. Pharmacogenomics J (2024)
 Body fat mass body fat distribution 403
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005316/ScoringFiles/PGS005316.txt.gz
PGS000925
(GBE_HC1020)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Unspecified acute lower respiratory infection (time-to-event) respiratory tract infectious disorder 402
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000925/ScoringFiles/PGS000925.txt.gz
PGS001486
(GBE_INI25387)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in superior fronto-occipital fasciculus on FA skeleton (L) neuroimaging measurement,
brain volume		 402
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001486/ScoringFiles/PGS001486.txt.gz
PGS001525
(GBE_INI12340)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 QRS duration QRS duration 401
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001525/ScoringFiles/PGS001525.txt.gz
PGS001502
(GBE_INI25471)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in sagittal stratum on FA skeleton (L) neuroimaging measurement,
brain volume		 400
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001502/ScoringFiles/PGS001502.txt.gz
PGS005089
(PGS400_OC)
 PGP000680 |
Barnes DR et al. medRxiv (2024)
|Pre		 Non-mucinous epithelial ovarian cancer ovarian carcinoma 400
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005089/ScoringFiles/PGS005089.txt.gz
PGS001866
(portability-PLR_615)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Endometriosis endometriosis 399
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001866/ScoringFiles/PGS001866.txt.gz
PGS001393
(GBE_INI1807)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Father's age at death father's age at death 398
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001393/ScoringFiles/PGS001393.txt.gz
PGS001493
(GBE_INI25463)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in anterior corona radiata on FA skeleton (L) neuroimaging measurement,
brain volume		 393
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001493/ScoringFiles/PGS001493.txt.gz
PGS001506
(GBE_INI25464)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in superior corona radiata on FA skeleton (R) neuroimaging measurement,
brain volume		 392
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001506/ScoringFiles/PGS001506.txt.gz
PGS002928
(ExPRSweb_FPG_FGovertime-corrected_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Fasting plasma glucose blood glucose amount 392
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002928/ScoringFiles/PGS002928.txt.gz
PGS002948
(ExPRSweb_Glucose_FGovertime-corrected_PRSCS_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Glucose blood glucose amount 392
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002948/ScoringFiles/PGS002948.txt.gz
PGS000942
(GBE_HC225)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Cholecystitis Cholecystitis 391
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000942/ScoringFiles/PGS000942.txt.gz
PGS001521
(GBE_INI22330)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 PQ interval PR interval 391
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001521/ScoringFiles/PGS001521.txt.gz
PGS000402
(PRSWEB_PHECODE172_C3-SKIN_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Skin cancer skin carcinoma 389
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000402/ScoringFiles/PGS000402.txt.gz
PGS001550
(GBE_INI25838)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Cingulate Gyrus, anterior division (L) neuroimaging measurement,
grey matter volume measurement		 389
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001550/ScoringFiles/PGS001550.txt.gz
PGS001295
(GBE_HC165)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 385
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001295/ScoringFiles/PGS001295.txt.gz
PGS001702
(GBE_INI25729)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ISOVF in tract uncinate fasciculus (L) neuroimaging measurement,
brain volume		 385
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001702/ScoringFiles/PGS001702.txt.gz
PGS000832
(T2D-GRS)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 384
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000832/ScoringFiles/PGS000832.txt.gz
PGS002531
(disease_AID_ALL.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 382
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002531/ScoringFiles/PGS002531.txt.gz
PGS002615
(disease_RESPIRATORY_ENT.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Respiratory and ear-nose-throat diseases respiratory system disease 382
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002615/ScoringFiles/PGS002615.txt.gz
PGS001645
(GBE_INI25490)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA FA in tract anterior thalamic radiation (L) neuroimaging measurement,
brain volume		 379
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001645/ScoringFiles/PGS001645.txt.gz
PGS001767
(GBE_INI25692)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA OD in tract inferior longitudinal fasciculus (R) neuroimaging measurement,
brain volume		 378
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001767/ScoringFiles/PGS001767.txt.gz
PGS000581
(PRSWEB_PHECODE185_Pca-PRACTICAL_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 377
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000581/ScoringFiles/PGS000581.txt.gz
PGS000582
(PRSWEB_PHECODE185_Pca-PRACTICAL_P_5e-08_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 377
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000582/ScoringFiles/PGS000582.txt.gz
PGS003634
(L_CA4_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left CA4 body volume hippocampal CA4 volume 375
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003634/ScoringFiles/PGS003634.txt.gz
PGS000171
(irf)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Immature fraction of reticulocytes reticulocyte count 372
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000171/ScoringFiles/PGS000171.txt.gz
PGS000830
(BMI_PGS_F)
 PGP000210 |
Zubair N et al. Sci Rep (2019)
 Body mass index (BMI) (female) body mass index,
female		 372
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000830/ScoringFiles/PGS000830.txt.gz - Check Terms/Licenses
PGS000375
(PRSWEB_PHECODE153_UKBB-SAIGE-HRC-X153_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Colorectal cancer colorectal cancer 370
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000375/ScoringFiles/PGS000375.txt.gz
PGS000935
(GBE_INI2966)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 High blood pressure, age at diagnosis age at diagnosis,
Increased blood pressure		 370
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000935/ScoringFiles/PGS000935.txt.gz
PGS001577
(GBE_INI25788)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Middle Frontal Gyrus (L) neuroimaging measurement,
grey matter volume measurement		 369
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001577/ScoringFiles/PGS001577.txt.gz
PGS000996
(GBE_HC262)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Diverticular disease/diverticulitis diverticular disease,
diverticulitis		 368
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000996/ScoringFiles/PGS000996.txt.gz
PGS001258
(GBE_HC57)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Radius fracture radius fracture 365
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001258/ScoringFiles/PGS001258.txt.gz
PGS001883
(portability-PLR_743.1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Osteoporosis osteoporosis 365
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001883/ScoringFiles/PGS001883.txt.gz
PGS000537
(PRSWEB_PHECODE174.1_iCOGS-Overall-BRCA_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 363
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000537/ScoringFiles/PGS000537.txt.gz
PGS004590
(PRS363_rand_eff)
 PGP000569 |
Lake J et al. Mol Psychiatry (2023)
 Alzheimer's disease Alzheimer disease 363
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004590/ScoringFiles/PGS004590.txt.gz
PGS002734
(GRS_SBP_362)
 PGP000343 |
Marques-Vidal P et al. J Hypertens (2022)
 Systolic blood pressure systolic blood pressure 362
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002734/ScoringFiles/PGS002734.txt.gz
PGS003012
(ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Hypertension hypertension 361
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003012/ScoringFiles/PGS003012.txt.gz
PGS003007
(ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Hypertension hypertension 359
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003007/ScoringFiles/PGS003007.txt.gz
PGS001712
(GBE_INI25593)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract superior thalamic radiation (R) neuroimaging measurement,
brain volume		 358
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001712/ScoringFiles/PGS001712.txt.gz
PGS001296
(GBE_HC648)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Insulin-dependent diabetes mellitus (time-to-event) type 1 diabetes mellitus 356
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001296/ScoringFiles/PGS001296.txt.gz
Showing 3901 to 3950 of 5198 rows