Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004103
(prscs.CV.GCST90013534.RA)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Rheumatoid arthritis rheumatoid arthritis 755,048
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004103/ScoringFiles/PGS004103.txt.gz
PGS004118
(pt_clump.auto.GCST90013534.RA)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Rheumatoid arthritis rheumatoid arthritis 91
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004118/ScoringFiles/PGS004118.txt.gz
PGS004133
(pt_clump_nested.CV.GCST90013534.RA)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Rheumatoid arthritis rheumatoid arthritis 155
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004133/ScoringFiles/PGS004133.txt.gz
PGS004148
(sbayesr.auto.GCST90013534.RA)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Rheumatoid arthritis rheumatoid arthritis 671,211
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004148/ScoringFiles/PGS004148.txt.gz
PGS004163
(UKBB_EnsPGS.GCST90013534.RA)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Rheumatoid arthritis rheumatoid arthritis 778,275
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004163/ScoringFiles/PGS004163.txt.gz
PGS004255
(GenoBoost_rheumatoid_arthritis_0)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Rheumatoid arthritis rheumatoid arthritis 30
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004255/ScoringFiles/PGS004255.txt.gz
PGS004256
(GenoBoost_rheumatoid_arthritis_1)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Rheumatoid arthritis rheumatoid arthritis 20
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004256/ScoringFiles/PGS004256.txt.gz
PGS004257
(GenoBoost_rheumatoid_arthritis_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Rheumatoid arthritis rheumatoid arthritis 20
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004257/ScoringFiles/PGS004257.txt.gz
PGS004258
(GenoBoost_rheumatoid_arthritis_3)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Rheumatoid arthritis rheumatoid arthritis 20
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004258/ScoringFiles/PGS004258.txt.gz
PGS004259
(GenoBoost_rheumatoid_arthritis_4)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Rheumatoid arthritis rheumatoid arthritis 20
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004259/ScoringFiles/PGS004259.txt.gz
PGS004326
(PRS154_RA)
 PGP000560 |
Zhang J et al. Environ Health Perspect (2023)
 Rheumatoid arthritis rheumatoid arthritis 154
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004326/ScoringFiles/PGS004326.txt.gz
PGS004873
(INTERVENE_MegaPRS_RA)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Rheumatoid arthritis rheumatoid arthritis 551,074
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004873/ScoringFiles/PGS004873.txt.gz
PGS004817
(RA_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Rheumatoid Arthritis rheumatoid arthritis 786,048
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004817/ScoringFiles/PGS004817.txt.gz
PGS004818
(RA_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Rheumatoid Arthritis rheumatoid arthritis 6,580,837
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004818/ScoringFiles/PGS004818.txt.gz
PGS004819
(RA_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Rheumatoid Arthritis rheumatoid arthritis 2,624,228
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004819/ScoringFiles/PGS004819.txt.gz
PGS004820
(RA_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Rheumatoid Arthritis rheumatoid arthritis 6,580,837
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004820/ScoringFiles/PGS004820.txt.gz
PGS000194
(G-PROB_Rapos)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Rheumatoid arthritis (CCP-negative) ACPA-positive rheumatoid arthritis 114
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000194/ScoringFiles/PGS000194.txt.gz
PGS000195
(G-PROB_Raneg)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Rheumatoid arthritis (CCP-negative) ACPA-negative rheumatoid arthritis 96
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000195/ScoringFiles/PGS000195.txt.gz
PGS001138
(GBE_BIN10030820)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Rheumatoid factor [> 16 IU/mL] rheumatoid factor measurement 456
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001138/ScoringFiles/PGS001138.txt.gz
PGS000326
(GRS-JIA-RFN-20)
 PGP000052 |
Cánovas R et al. Ann Rheum Dis (2020)
 Rheumatoid-factor-negative Polyarthritis (Juvenile Idiophatic Arthritis) polyarticular juvenile idiopathic arthritis, rheumatoid factor negative 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000326/ScoringFiles/PGS000326.txt.gz
PGS001235
(GBE_INI23122)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Right arm mass (predicted) body weights and measures 28,988
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001235/ScoringFiles/PGS001235.txt.gz
PGS003611
(R_CA1_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 body volume hippocampal CA1 volume 7,104
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003611/ScoringFiles/PGS003611.txt.gz
PGS003615
(R_CA1_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 body volume hippocampal CA1 volume 123,648
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003615/ScoringFiles/PGS003615.txt.gz
PGS003619
(R_CA1_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 body volume hippocampal CA1 volume 189
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003619/ScoringFiles/PGS003619.txt.gz
PGS003612
(R_CA1_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 head volume hippocampal CA1 volume 6,252
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003612/ScoringFiles/PGS003612.txt.gz
PGS003616
(R_CA1_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 head volume hippocampal CA1 volume 19,937
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003616/ScoringFiles/PGS003616.txt.gz
PGS003620
(R_CA1_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 head volume hippocampal CA1 volume 19,628
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003620/ScoringFiles/PGS003620.txt.gz
PGS003623
(R_CA3_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 body volume hippocampal CA3 volume 9,398
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003623/ScoringFiles/PGS003623.txt.gz
PGS003627
(R_CA3_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 body volume hippocampal CA3 volume 3,205
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003627/ScoringFiles/PGS003627.txt.gz
PGS003631
(R_CA3_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 body volume hippocampal CA3 volume 6,731
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003631/ScoringFiles/PGS003631.txt.gz
PGS003624
(R_CA3_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 head volume hippocampal CA3 volume 594
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003624/ScoringFiles/PGS003624.txt.gz
PGS003628
(R_CA3_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 head volume hippocampal CA3 volume 19,760
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003628/ScoringFiles/PGS003628.txt.gz
PGS003632
(R_CA3_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 head volume hippocampal CA3 volume 38,665
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003632/ScoringFiles/PGS003632.txt.gz
PGS003636
(R_CA4_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 body volume hippocampal CA4 volume 3,322
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003636/ScoringFiles/PGS003636.txt.gz
PGS003640
(R_CA4_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 body volume hippocampal CA4 volume 497
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003640/ScoringFiles/PGS003640.txt.gz
PGS003644
(R_CA4_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 body volume hippocampal CA4 volume 10,113
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003644/ScoringFiles/PGS003644.txt.gz
PGS003635
(R_CA4_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 head volume hippocampal CA4 volume 12,506
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003635/ScoringFiles/PGS003635.txt.gz
PGS003639
(R_CA4_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 head volume hippocampal CA4 volume 3,200
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003639/ScoringFiles/PGS003639.txt.gz
PGS003643
(R_CA4_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 head volume hippocampal CA4 volume 73,791
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003643/ScoringFiles/PGS003643.txt.gz
PGS003676
(R_fimbria_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right fimbria volume hippocampus fimbria volume 39,045
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003676/ScoringFiles/PGS003676.txt.gz
PGS003678
(R_fimbria_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right fimbria volume hippocampus fimbria volume 70,659
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003678/ScoringFiles/PGS003678.txt.gz
PGS003680
(R_fimbria_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right fimbria volume hippocampus fimbria volume 13,970
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003680/ScoringFiles/PGS003680.txt.gz
PGS003594
(R_GC-ML-DG_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus body volume dentate gyrus volume 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003594/ScoringFiles/PGS003594.txt.gz
PGS003598
(R_GC-ML-DG_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus body volume dentate gyrus volume 3,904
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003598/ScoringFiles/PGS003598.txt.gz
PGS003602
(R_GC-ML-DG_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus body volume dentate gyrus volume 10,104
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003602/ScoringFiles/PGS003602.txt.gz
PGS003593
(R_GC-ML-DG_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus head volume dentate gyrus volume 15,738
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003593/ScoringFiles/PGS003593.txt.gz
PGS003597
(R_GC-ML-DG_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus head volume dentate gyrus volume 283
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003597/ScoringFiles/PGS003597.txt.gz
PGS003601
(R_GC-ML-DG_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus head volume dentate gyrus volume 48,751
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003601/ScoringFiles/PGS003601.txt.gz
PGS001120
(GBE_INI47)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Right hand grip strength grip strength measurement 12,644
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001120/ScoringFiles/PGS001120.txt.gz
PGS001039
(GBE_INI4125)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Right heel bone mineral density (BMD) T-score, automated heel bone mineral density 9,753
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001039/ScoringFiles/PGS001039.txt.gz
Showing 3951 to 4000 of 5296 rows