Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003765
(GRS.PCa.451)
 PGP000488 |
Wang A W et al. Nature Genetics (2023)
 Prostate cancer prostate carcinoma 451
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003765/ScoringFiles/PGS003765.txt.gz
PGS003766
(GRS.PCa.451.TOPMed)
 PGP000488 |
Wang A W et al. Nature Genetics (2023)
 Prostate cancer prostate carcinoma 451
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003766/ScoringFiles/PGS003766.txt.gz
PGS001015
(GBE_HC85)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Enlarged prostate prostate disorder 449
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001015/ScoringFiles/PGS001015.txt.gz
PGS001678
(GBE_INI25656)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract parahippocampal part of cingulum (L) neuroimaging measurement,
brain volume		 449
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001678/ScoringFiles/PGS001678.txt.gz
PGS005099
(psa2024_prs_447)
 PGP000692 |
Hoffmann TJ et al. Nat Genet (2025)
 Prostate specific antigen prostate specific antigen amount 447
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005099/ScoringFiles/PGS005099.txt.gz
PGS000435
(PRSWEB_PHECODE172.2_C3-OTHER-SKIN_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Other non-epithelial skin cancer skin cancer 446
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000435/ScoringFiles/PGS000435.txt.gz
PGS001601
(GBE_INI25874)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Supracalcarine Cortex (L) neuroimaging measurement,
grey matter volume measurement		 446
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001601/ScoringFiles/PGS001601.txt.gz
PGS004652
(logTG_AFR_lassosum2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Log triglycerides triglyceride measurement 446
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004652/ScoringFiles/PGS004652.txt.gz
PGS000940
(GBE_HC1132)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Intestinal malabsorption (time-to-event) Malabsorption 443
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000940/ScoringFiles/PGS000940.txt.gz
PGS001630
(GBE_INI25019)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of hippocampus (L) neuroimaging measurement,
hippocampal volume		 442
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001630/ScoringFiles/PGS001630.txt.gz
PGS003862
(multiancestry_LF_GRS_FF_weights_EUR)
 PGP000500 |
Shrine N et al. Nat Genet (2023)
 Lung function (FEV1/FVC) FEV/FVC ratio 442
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003862/ScoringFiles/PGS003862.txt.gz
PGS005267
(hypothyroidism_mixed_pt)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Hypothyroidism hypothyroidism 439
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005267/ScoringFiles/PGS005267.txt.gz
PGS000183
(neut_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Neutrophil percentage of white cells neutrophil percentage of leukocytes 437
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000183/ScoringFiles/PGS000183.txt.gz
PGS003863
(multiancestry_LF_GRS_FF_weights_AFR)
 PGP000500 |
Shrine N et al. Nat Genet (2023)
 Lung function (FEV1/FVC) FEV/FVC ratio 437
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003863/ScoringFiles/PGS003863.txt.gz
PGS000419
(PRSWEB_PHECODE172.1_C43_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Melanomas of skin (diagnosis or history) melanoma 436
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000419/ScoringFiles/PGS000419.txt.gz
PGS001345
(GBE_BIN22127)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Asthma (diagnosed by doctor) asthma 435
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001345/ScoringFiles/PGS001345.txt.gz
PGS003864
(multiancestry_LF_GRS_FF_weights_AMR)
 PGP000500 |
Shrine N et al. Nat Genet (2023)
 Lung function (FEV1/FVC) FEV/FVC ratio 434
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003864/ScoringFiles/PGS003864.txt.gz
PGS000933
(GBE_HC1024)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Nasal polyp (time-to-event) Nasal polyposis 433
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000933/ScoringFiles/PGS000933.txt.gz
PGS001125
(GBE_BIN_FC20001508)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Coffee consumption (instant coffee) coffee consumption measurement 432
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001125/ScoringFiles/PGS001125.txt.gz
PGS001731
(GBE_INI25626)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L3 in tract anterior thalamic radiation (R) neuroimaging measurement,
brain volume		 432
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001731/ScoringFiles/PGS001731.txt.gz
PGS001844
(portability-PLR_451)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Phlebitis and thrombophlebitis Thrombophlebitis,
phlebitis		 431
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001844/ScoringFiles/PGS001844.txt.gz
PGS001301
(GBE_HC303)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Malabsorption/coeliac disease celiac disease 428
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001301/ScoringFiles/PGS001301.txt.gz
PGS002275
(SBP-PRS)
 PGP000303 |
Groenland EH et al. Atherosclerosis (2022)
 Systolic blood pressure systolic blood pressure 425
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002275/ScoringFiles/PGS002275.txt.gz
PGS004602
(PRS424_T2D)
 PGP000580 |
Zhuang P et al. Diabetes Care (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 424
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004602/ScoringFiles/PGS004602.txt.gz
PGS012554
(GRS_T2D)
 PGP000797 |
Yang R et al. BMC Med (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 424
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012554/ScoringFiles/PGS012554.txt.gz
PGS001114
(GBE_BIN_FC8006154)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ibuprofen use, self-reported NSAID use measurement,
self-reported trait		 419
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001114/ScoringFiles/PGS001114.txt.gz
PGS003281
(ExPRSweb_CysC_30720-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 415
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003281/ScoringFiles/PGS003281.txt.gz
PGS002295
(GRS413_IGF-1)
 PGP000325 |
Tsai CW et al. American Journal of Cancer Research (2022)
 Insulin growth-like factor-1 level insulin-like protein level 413
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002295/ScoringFiles/PGS002295.txt.gz
PGS003865
(multiancestry_LF_GRS_FF_weights_EAS)
 PGP000500 |
Shrine N et al. Nat Genet (2023)
 Lung function (FEV1/FVC) FEV/FVC ratio 406
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003865/ScoringFiles/PGS003865.txt.gz
PGS003195
(ExPRSweb_VitD_30890-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D level 404
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003195/ScoringFiles/PGS003195.txt.gz
PGS005316
(BFM_PRS)
 PGP000766 |
Türkmen D et al. Pharmacogenomics J (2024)
 Body fat mass body fat distribution 403
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005316/ScoringFiles/PGS005316.txt.gz
PGS000925
(GBE_HC1020)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Unspecified acute lower respiratory infection (time-to-event) respiratory tract infectious disorder 402
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000925/ScoringFiles/PGS000925.txt.gz
PGS001486
(GBE_INI25387)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in superior fronto-occipital fasciculus on FA skeleton (L) neuroimaging measurement,
brain volume		 402
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001486/ScoringFiles/PGS001486.txt.gz
PGS001525
(GBE_INI12340)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 QRS duration QRS duration 401
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001525/ScoringFiles/PGS001525.txt.gz
PGS001502
(GBE_INI25471)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in sagittal stratum on FA skeleton (L) neuroimaging measurement,
brain volume		 400
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001502/ScoringFiles/PGS001502.txt.gz
PGS005089
(PGS400_OC)
 PGP000680 |
Barnes DR et al. NPJ Genom Med (2025)
 Non-mucinous epithelial ovarian cancer ovarian carcinoma 400
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005089/ScoringFiles/PGS005089.txt.gz
PGS001866
(portability-PLR_615)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Endometriosis endometriosis 399
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001866/ScoringFiles/PGS001866.txt.gz
PGS001393
(GBE_INI1807)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Father's age at death father's age at death 398
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001393/ScoringFiles/PGS001393.txt.gz
PGS001493
(GBE_INI25463)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in anterior corona radiata on FA skeleton (L) neuroimaging measurement,
brain volume		 393
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001493/ScoringFiles/PGS001493.txt.gz
PGS001506
(GBE_INI25464)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in superior corona radiata on FA skeleton (R) neuroimaging measurement,
brain volume		 392
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001506/ScoringFiles/PGS001506.txt.gz
PGS002928
(ExPRSweb_FPG_FGovertime-corrected_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Fasting plasma glucose blood glucose amount 392
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002928/ScoringFiles/PGS002928.txt.gz
PGS002948
(ExPRSweb_Glucose_FGovertime-corrected_PRSCS_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Glucose blood glucose amount 392
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002948/ScoringFiles/PGS002948.txt.gz
PGS000942
(GBE_HC225)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Cholecystitis Cholecystitis 391
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000942/ScoringFiles/PGS000942.txt.gz
PGS001521
(GBE_INI22330)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 PQ interval PR interval 391
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001521/ScoringFiles/PGS001521.txt.gz
PGS000402
(PRSWEB_PHECODE172_C3-SKIN_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Skin cancer skin carcinoma 389
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000402/ScoringFiles/PGS000402.txt.gz
PGS001550
(GBE_INI25838)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Cingulate Gyrus, anterior division (L) neuroimaging measurement,
grey matter volume measurement		 389
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001550/ScoringFiles/PGS001550.txt.gz
PGS001295
(GBE_HC165)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 385
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001295/ScoringFiles/PGS001295.txt.gz
PGS001702
(GBE_INI25729)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ISOVF in tract uncinate fasciculus (L) neuroimaging measurement,
brain volume		 385
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001702/ScoringFiles/PGS001702.txt.gz
PGS000832
(T2D-GRS)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 384
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000832/ScoringFiles/PGS000832.txt.gz
PGS002531
(disease_AID_ALL.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Autoimmune disease autoimmune disease 382
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002531/ScoringFiles/PGS002531.txt.gz
Showing 4001 to 4050 of 5332 rows