Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002165
(portability-ldpred2_log_cystatinC)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 781,302
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002165/ScoringFiles/PGS002165.txt.gz
PGS003279
(ExPRSweb_CysC_30720-irnt_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 879,560
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003279/ScoringFiles/PGS003279.txt.gz
PGS003280
(ExPRSweb_CysC_30720-irnt_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 346
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003280/ScoringFiles/PGS003280.txt.gz
PGS003281
(ExPRSweb_CysC_30720-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 415
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003281/ScoringFiles/PGS003281.txt.gz
PGS003282
(ExPRSweb_CysC_30720-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 7,451,904
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003282/ScoringFiles/PGS003282.txt.gz
PGS003283
(ExPRSweb_CysC_30720-irnt_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003283/ScoringFiles/PGS003283.txt.gz
PGS003284
(ExPRSweb_CysC_30720-raw_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 735,756
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003284/ScoringFiles/PGS003284.txt.gz
PGS003285
(ExPRSweb_CysC_30720-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 931
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003285/ScoringFiles/PGS003285.txt.gz
PGS003286
(ExPRSweb_CysC_30720-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 1,057
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003286/ScoringFiles/PGS003286.txt.gz
PGS003287
(ExPRSweb_CysC_30720-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 7,451,726
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003287/ScoringFiles/PGS003287.txt.gz
PGS003288
(ExPRSweb_CysC_30720-raw_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Cystatin C cystatin C measurement 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003288/ScoringFiles/PGS003288.txt.gz
PGS003528
(cont-decay-log_cystatinC)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Cystatin C cystatin C measurement 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003528/ScoringFiles/PGS003528.txt.gz
PGS000226
(CSTB)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Cystatin-B (CSTB) serum levels blood protein amount 552,195
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000226/ScoringFiles/PGS000226.txt.gz
PGS000232
(CXCL6)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 C-X-C motif chemokine 6 (CXCL6) serum levels blood protein amount 552,061
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000232/ScoringFiles/PGS000232.txt.gz
PGS000230
(CXCL1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 C-X-C motif chemokine 1 (CXCL1) serum levels blood protein amount 552,234
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000230/ScoringFiles/PGS000230.txt.gz
PGS000231
(CXCL16)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 C-X-C motif chemokine 16 (CXCL16) serum levels blood protein amount 552,241
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000231/ScoringFiles/PGS000231.txt.gz
PGS000339
(PRS22_CM)
 PGP000106 |
Law MH et al. Hum Mol Genet (2020)
 Cutaneous melanoma cutaneous melanoma 22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000339/ScoringFiles/PGS000339.txt.gz
PGS000766
(PRS56_CM)
 PGP000172 |
Bakshi A et al. J Natl Cancer Inst (2021)
 Cutaneous melanoma cutaneous melanoma 56
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000766/ScoringFiles/PGS000766.txt.gz
PGS004751
(current_smoker_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Current smoker smoking status measurement 1,076,735
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004751/ScoringFiles/PGS004751.txt.gz
PGS004752
(current_smoker_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Current smoker smoking status measurement 4,496,606
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004752/ScoringFiles/PGS004752.txt.gz
PGS004753
(current_smoker_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Current smoker smoking status measurement 5,469,505
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004753/ScoringFiles/PGS004753.txt.gz
PGS004754
(current_smoker_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Current smoker smoking status measurement 4,496,606
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004754/ScoringFiles/PGS004754.txt.gz
PGS001330
(GBE_HC1101)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Crohn's disease [regional enteritis] (time-to-event) Crohn disease 220
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001330/ScoringFiles/PGS001330.txt.gz
PGS001331
(GBE_HC322)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Crohn's disease Crohn disease 257
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001331/ScoringFiles/PGS001331.txt.gz
PGS004254
(cd_ldpred2)
 PGP000545 |
Middha P et al. Nat Commun (2024)
 Crohn's disease Crohn disease 744,682
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004254/ScoringFiles/PGS004254.txt.gz
PGS000678
(snpnet.Creatinine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Creatinine [umol/L] serum creatinine amount 21,027
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000678/ScoringFiles/PGS000678.txt.gz - Check Terms/Licenses
PGS004334
(X30700.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Creatinine (umol/L) serum creatinine amount 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004334/ScoringFiles/PGS004334.txt.gz
PGS000679
(snpnet.Creatinine_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Creatinine in urine [umol/L] creatinine clearance measurement 5,469
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000679/ScoringFiles/PGS000679.txt.gz - Check Terms/Licenses
PGS001944
(portability-PLR_log_creatinine_urine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Creatinine (enzymatic) in urine creatinine clearance measurement 37,529
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001944/ScoringFiles/PGS001944.txt.gz
PGS002162
(portability-ldpred2_log_creatinine_urine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Creatinine (enzymatic) in urine creatinine clearance measurement 922,786
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002162/ScoringFiles/PGS002162.txt.gz
PGS001945
(portability-PLR_log_creatinine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Creatinine serum creatinine amount 76,800
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001945/ScoringFiles/PGS001945.txt.gz
PGS002163
(portability-ldpred2_log_creatinine)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Creatinine serum creatinine amount 835,964
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002163/ScoringFiles/PGS002163.txt.gz
PGS003526
(cont-decay-log_creatinine)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Creatinine serum creatinine amount 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003526/ScoringFiles/PGS003526.txt.gz
PGS003229
(ExPRSweb_Creatine_30510-irnt_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 557,260
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003229/ScoringFiles/PGS003229.txt.gz
PGS003230
(ExPRSweb_Creatine_30510-irnt_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 11,173
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003230/ScoringFiles/PGS003230.txt.gz
PGS003231
(ExPRSweb_Creatine_30510-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 19,491
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003231/ScoringFiles/PGS003231.txt.gz
PGS003232
(ExPRSweb_Creatine_30510-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 7,062,258
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003232/ScoringFiles/PGS003232.txt.gz
PGS003233
(ExPRSweb_Creatine_30510-irnt_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 1,113,832
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003233/ScoringFiles/PGS003233.txt.gz
PGS003234
(ExPRSweb_Creatine_30510-raw_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 530,378
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003234/ScoringFiles/PGS003234.txt.gz
PGS003235
(ExPRSweb_Creatine_30510-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 10,760
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003235/ScoringFiles/PGS003235.txt.gz
PGS003236
(ExPRSweb_Creatine_30510-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 19,006
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003236/ScoringFiles/PGS003236.txt.gz
PGS003237
(ExPRSweb_Creatine_30510-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 7,021,804
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003237/ScoringFiles/PGS003237.txt.gz
PGS003238
(ExPRSweb_Creatine_30510-raw_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 1,113,832
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003238/ScoringFiles/PGS003238.txt.gz
PGS003239
(ExPRSweb_Creatine_30700-irnt_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 828,634
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003239/ScoringFiles/PGS003239.txt.gz
PGS003240
(ExPRSweb_Creatine_30700-irnt_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 19,120
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003240/ScoringFiles/PGS003240.txt.gz
PGS003241
(ExPRSweb_Creatine_30700-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 29,361
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003241/ScoringFiles/PGS003241.txt.gz
PGS003242
(ExPRSweb_Creatine_30700-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 7,451,744
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003242/ScoringFiles/PGS003242.txt.gz
PGS003243
(ExPRSweb_Creatine_30700-irnt_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003243/ScoringFiles/PGS003243.txt.gz
PGS003244
(ExPRSweb_Creatine_30700-raw_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 638,561
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003244/ScoringFiles/PGS003244.txt.gz
PGS003245
(ExPRSweb_Creatine_30700-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Creatine creatine level 3,503
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003245/ScoringFiles/PGS003245.txt.gz
Showing 4051 to 4100 of 5332 rows