Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000906
(PRS-5)
 PGP000237 |
Tesi N et al. J Gerontol A Biol Sci Med Sci (2021)
 Longevity life span determination trait 330
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000906/ScoringFiles/PGS000906.txt.gz
PGS001421
(GBE_INI25093)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean FA in cingulum hippocampus on FA skeleton (L) neuroimaging measurement,
brain volume		 330
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001421/ScoringFiles/PGS001421.txt.gz
PGS001840
(portability-PLR_415)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Pulmonary heart disease cor pulmonale 330
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001840/ScoringFiles/PGS001840.txt.gz
PGS001282
(GBE_HC815)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Migraine (time-to-event) migraine disorder 329
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001282/ScoringFiles/PGS001282.txt.gz
PGS001044
(GBE_BIN_FC2006179)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Glucosamine intake vitamin supplement exposure measurement 324
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001044/ScoringFiles/PGS001044.txt.gz
PGS003651
(L_hippocampal_tail_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left hippocampal tail volume hippocampal formation volume 324
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003651/ScoringFiles/PGS003651.txt.gz
PGS001309
(GBE_HC1212)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other rheumatoid arthritis (time-to-event) rheumatoid arthritis 323
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001309/ScoringFiles/PGS001309.txt.gz
PGS001706
(GBE_INI25582)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract inferior fronto-occipital fasciculus (R) neuroimaging measurement,
brain volume		 322
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001706/ScoringFiles/PGS001706.txt.gz
PGS001814
(portability-PLR_241.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Nontoxic multinodular goiter multinodular goiter,
nontoxic goiter		 322
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001814/ScoringFiles/PGS001814.txt.gz
PGS001137
(GBE_HC302)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Retinal detachment retinal detachment 321
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001137/ScoringFiles/PGS001137.txt.gz
PGS000835
(ISR)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Insulin secretion rate insulin secretion trait 319
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000835/ScoringFiles/PGS000835.txt.gz
PGS001364
(GBE_INI5113)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 6mm cylindrical power angle (L) eye measurement 319
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001364/ScoringFiles/PGS001364.txt.gz
PGS001590
(GBE_INI25794)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Precentral Gyrus (L) neuroimaging measurement,
grey matter volume measurement		 318
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001590/ScoringFiles/PGS001590.txt.gz
PGS005098
(psa2024_prs_318)
 PGP000692 |
Hoffmann TJ et al. Nat Genet (2025)
 Prostate specific antigen prostate specific antigen amount 318
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005098/ScoringFiles/PGS005098.txt.gz
PGS001273
(GBE_HC22)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Osteoporosis osteoporosis 316
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001273/ScoringFiles/PGS001273.txt.gz
PGS001708
(GBE_INI25584)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L1 in tract inferior longitudinal fasciculus (R) neuroimaging measurement,
brain volume		 316
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001708/ScoringFiles/PGS001708.txt.gz
PGS001744
(GBE_INI25516)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MD in tract acoustic radiation (R) neuroimaging measurement,
brain volume		 315
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001744/ScoringFiles/PGS001744.txt.gz
PGS004175
(t1d_5)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 1 diabetes type 1 diabetes mellitus 315
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004175/ScoringFiles/PGS004175.txt.gz
PGS003270
(ExPRSweb_Creatine_eGFRcrea-overall-EA_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 314
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003270/ScoringFiles/PGS003270.txt.gz
PGS000004
(PRS313_BC)
 PGP000002 |
Mavaddat N et al. Am J Hum Genet (2018)
 Breast cancer breast carcinoma 313
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000004/ScoringFiles/PGS000004.txt.gz
PGS000005
(PRS313_ERpos)
 PGP000002 |
Mavaddat N et al. Am J Hum Genet (2018)
 ER-positive breast cancer estrogen-receptor positive breast cancer 313
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000005/ScoringFiles/PGS000005.txt.gz
PGS000006
(PRS313_ERneg)
 PGP000002 |
Mavaddat N et al. Am J Hum Genet (2018)
 ER-negative breast cancer estrogen-receptor negative breast cancer 313
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000006/ScoringFiles/PGS000006.txt.gz
PGS000336
(GRS313_Chron)
 PGP000103 |
Maukonen M et al. J Biol Rhythms (2020)
 Chronotype chronotype measurement 313
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000336/ScoringFiles/PGS000336.txt.gz
PGS001111
(GBE_cancer1038)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Male genital tract cancer male reproductive organ cancer 313
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001111/ScoringFiles/PGS001111.txt.gz
PGS001392
(GBE_FH1001)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Family history of lung cancer family history of lung cancer 312
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001392/ScoringFiles/PGS001392.txt.gz
PGS001924
(portability-PLR_glasses)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Wears glasses or contact lenses eye measurement 311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001924/ScoringFiles/PGS001924.txt.gz
PGS000529
(PRSWEB_PHECODE174.1_iCOGS-ER-positive-BRCA_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 310
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000529/ScoringFiles/PGS000529.txt.gz
PGS001668
(GBE_INI25659)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract corticospinal tract (R) neuroimaging measurement,
brain volume		 310
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001668/ScoringFiles/PGS001668.txt.gz
PGS001535
(GBE_BIN_FC20002267)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Use of sun/uv protection (Sometimes) sun exposure measurement 309
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001535/ScoringFiles/PGS001535.txt.gz
PGS004647
(LDL_SAS_lassosum2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 307
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004647/ScoringFiles/PGS004647.txt.gz
PGS004699
(Non-HLA-GRS)
 PGP000603 |
Loginovic P et al. Nat Commun (2024)
 Multiple sclerosis multiple sclerosis 307
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004699/ScoringFiles/PGS004699.txt.gz
PGS004242
(PRS306_breast)
 PGP000542 |
Kim ES et al. NPJ Precis Oncol (2023)
 Breast cancer breast carcinoma 306
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004242/ScoringFiles/PGS004242.txt.gz
PGS004610
(child_BMI)
 PGP000585 |
Hawkes G et al. Diabetologia (2023)
 Body mass index (BMI) body mass index 306
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004610/ScoringFiles/PGS004610.txt.gz
PGS001718
(GBE_INI25601)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA L2 in tract cingulate gyrus part of cingulum (R) neuroimaging measurement,
brain volume		 305
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001718/ScoringFiles/PGS001718.txt.gz
PGS000845
(HDL)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 HDL cholesterol high density lipoprotein cholesterol measurement 303
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000845/ScoringFiles/PGS000845.txt.gz
PGS001632
(GBE_INI25018)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of pallidum (R) neuroimaging measurement,
pallidum volume		 303
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001632/ScoringFiles/PGS001632.txt.gz
PGS004112
(pt_clump.auto.GCST008059.CKD)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Chronic kidney disease (CKD) chronic kidney disease 301
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004112/ScoringFiles/PGS004112.txt.gz
PGS004113
(pt_clump.auto.GCST008059.eGFR)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 eGFR glomerular filtration rate 301
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004113/ScoringFiles/PGS004113.txt.gz
PGS004302
(GenoBoost_colorectal_cancer_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 300
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004302/ScoringFiles/PGS004302.txt.gz
PGS004925
(PRS300_CHD)
 PGP000660 |
Kim Y et al. J Intern Med (2023)
 Coronary heart disease coronary artery disorder 300
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004925/ScoringFiles/PGS004925.txt.gz
PGS000043
(PRS_VTE)
 PGP000030 |
Klarin D et al. Nat Genet (2019)
 Venous thromboembolism venous thromboembolism 297
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000043/ScoringFiles/PGS000043.txt.gz
PGS001768
(GBE_INI25694)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA OD in tract medial lemniscus (L) neuroimaging measurement,
brain volume		 297
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001768/ScoringFiles/PGS001768.txt.gz
PGS004122
(pt_clump_nested.CV.GCST004773.T2D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 297
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004122/ScoringFiles/PGS004122.txt.gz
PGS005317
(DBP_PRS)
 PGP000766 |
Türkmen D et al. Pharmacogenomics J (2024)
 Diastolic blood pressure diastolic blood pressure 297
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005317/ScoringFiles/PGS005317.txt.gz
PGS000432
(PRSWEB_PHECODE172.1_UKBB-SAIGE-HRC-X172.1_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Melanomas of skin (diagnosis or history) melanoma 296
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000432/ScoringFiles/PGS000432.txt.gz
PGS001746
(GBE_INI25519)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MD in tract cingulate gyrus part of cingulum (L) neuroimaging measurement,
brain volume		 296
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001746/ScoringFiles/PGS001746.txt.gz
PGS000716
(PGS295_elbs)
 PGP000132 |
Richardson TG et al. BMJ (2020)
 Early life body size body mass index,
comparative body size at age 10, self-reported		 295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000716/ScoringFiles/PGS000716.txt.gz
PGS000887
(GLGC_2021_AFR_LDL_PRS_weights_PT)
 PGP000230 |
Graham SE et al. Nature (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000887/ScoringFiles/PGS000887.txt.gz
PGS004173
(t1d_3)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Type 1 diabetes type 1 diabetes mellitus 295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004173/ScoringFiles/PGS004173.txt.gz
PGS002622
(disease_T2D.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 293
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002622/ScoringFiles/PGS002622.txt.gz
Showing 4101 to 4150 of 5337 rows