Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001760
(GBE_INI25560)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MO in tract medial lemniscus (R) neuroimaging measurement,
brain volume		 258
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001760/ScoringFiles/PGS001760.txt.gz
PGS000498
(PRSWEB_PHECODE174.1_Onco-iCOGS-ER-positive-BRCA_P_5e-08_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 257
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000498/ScoringFiles/PGS000498.txt.gz
PGS001331
(GBE_HC322)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Crohn's disease Crohn's disease 257
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001331/ScoringFiles/PGS001331.txt.gz
PGS000497
(PRSWEB_PHECODE174.1_Onco-iCOGS-ER-positive-BRCA_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 257
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000497/ScoringFiles/PGS000497.txt.gz
PGS003713
(R_subiculum_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right subiculum body volume subiculum volume 257
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003713/ScoringFiles/PGS003713.txt.gz
PGS001505
(GBE_INI25465)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in superior corona radiata on FA skeleton (L) neuroimaging measurement,
brain volume		 257
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001505/ScoringFiles/PGS001505.txt.gz
PGS003125
(ExPRSweb_Thinness_STILTS-UKHLS_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 256
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003125/ScoringFiles/PGS003125.txt.gz
PGS001395
(GBE_INI21025)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Frequency of discomfort/pain in abdomen in last 3 months Abdominal pain 256
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001395/ScoringFiles/PGS001395.txt.gz
PGS001875
(portability-PLR_714.1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Rheumatoid arthritis rheumatoid arthritis 256
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001875/ScoringFiles/PGS001875.txt.gz
PGS002586
(other_MORNINGPERSON.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Chronotype (morning person) chronotype measurement 255
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002586/ScoringFiles/PGS002586.txt.gz
PGS001372
(GBE_INI22146)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Age hayfever or allergic rhinitis diagnosed by doctor allergic disease 255
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001372/ScoringFiles/PGS001372.txt.gz
PGS000303
(GRS253_eGFR)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Estimated glomerular filtration rate glomerular filtration rate 253
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000303/ScoringFiles/PGS000303.txt.gz
PGS001031
(GBE_HC1261)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Fibroblastic disorders (time-to-event) fibroblastic disorder 252
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001031/ScoringFiles/PGS001031.txt.gz
PGS002748
(PRS_251)
 PGP000361 |
Chiou JS et al. BMC Med (2022)
 Height body height 251
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002748/ScoringFiles/PGS002748.txt.gz
PGS000600
(PRSWEB_PHECODE187.2_C3-TESTIS_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Malignant neoplasm of testis testicular carcinoma 250
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000600/ScoringFiles/PGS000600.txt.gz
PGS001470
(GBE_INI25352)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in medial lemniscus on FA skeleton (R) neuroimaging measurement,
brain volume		 250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001470/ScoringFiles/PGS001470.txt.gz
PGS001819
(portability-PLR_250.7)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Diabetic retinopathy diabetic retinopathy 249
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001819/ScoringFiles/PGS001819.txt.gz
PGS004115
(pt_clump.auto.GCST008972.Urate)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Urate urate measurement 248
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004115/ScoringFiles/PGS004115.txt.gz
PGS004114
(pt_clump.auto.GCST008972.Gout)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Gout gout 248
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004114/ScoringFiles/PGS004114.txt.gz
PGS000309
(GRS247_HDL)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 HDL cholesterol high density lipoprotein cholesterol measurement 247
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000309/ScoringFiles/PGS000309.txt.gz
PGS001469
(GBE_INI25353)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ICVF in medial lemniscus on FA skeleton (L) neuroimaging measurement,
brain volume		 246
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001469/ScoringFiles/PGS001469.txt.gz
PGS004127
(pt_clump_nested.CV.GCST007954.HbA1c)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 HbA1c HbA1c measurement 246
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004127/ScoringFiles/PGS004127.txt.gz
PGS001692
(GBE_INI25709)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ISOVF in tract cingulate gyrus part of cingulum (R) neuroimaging measurement,
brain volume		 245
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001692/ScoringFiles/PGS001692.txt.gz
PGS003067
(ExPRSweb_Smoking_SmokingInitiation_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Smoking status smoking status measurement 244
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003067/ScoringFiles/PGS003067.txt.gz
PGS001551
(GBE_INI25839)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Cingulate Gyrus, anterior division (R) neuroimaging measurement,
grey matter volume measurement		 244
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001551/ScoringFiles/PGS001551.txt.gz
PGS001375
(GBE_INI22426)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Average heart rate heart rate 243
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001375/ScoringFiles/PGS001375.txt.gz
PGS001843
(portability-PLR_443.9)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Peripheral vascular disease, unspecified peripheral vascular disease 242
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001843/ScoringFiles/PGS001843.txt.gz
PGS000927
(GBE_HC1158)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other dermatitis (time-to-event) dermatitis 242
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000927/ScoringFiles/PGS000927.txt.gz
PGS003438
(PRS241_CAD)
 PGP000440 |
Marston NA et al. JAMA Cardiol (2023)
 Coronary artery disease coronary artery disease 241
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003438/ScoringFiles/PGS003438.txt.gz
PGS004224
(GRS241_CKD)
 PGP000524 |
Lan R et al. Tob Induc Dis (2023)
 Chronic kidney disease chronic kidney disease 241
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004224/ScoringFiles/PGS004224.txt.gz
PGS002588
(disease_DERMATOLOGY.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Dermatologic diseases skin disease 240
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002588/ScoringFiles/PGS002588.txt.gz
PGS005321
(SBP_PRS)
 PGP000766 |
Türkmen D et al. Pharmacogenomics J (2024)
 Systolic blood pressure systolic blood pressure 240
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005321/ScoringFiles/PGS005321.txt.gz
PGS000990
(GBE_HC878)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Retinal detachments and breaks (time-to-event) retinal detachment,
retinal break		 237
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000990/ScoringFiles/PGS000990.txt.gz
PGS001580
(GBE_INI25860)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Occipital Fusiform Gyrus (L) neuroimaging measurement,
grey matter volume measurement		 235
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001580/ScoringFiles/PGS001580.txt.gz
PGS003261
(ExPRSweb_Creatine_eGFRcrea-overall-IV-2GC_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 234
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003261/ScoringFiles/PGS003261.txt.gz
PGS000311
(GRS234_TC)
 PGP000092 |
Xie T et al. Circ Genom Precis Med (2020)
 Total cholesterol total cholesterol measurement 234
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000311/ScoringFiles/PGS000311.txt.gz
PGS003260
(ExPRSweb_Creatine_eGFRcrea-overall-IV-2GC_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 234
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003260/ScoringFiles/PGS003260.txt.gz
PGS002833
(ExPRSweb_Alcohol_DrinksPerWeek_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Alcohol consumption alcohol consumption quality 232
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002833/ScoringFiles/PGS002833.txt.gz
PGS002796
(GRS232_Eur)
 PGP000379 |
Shi Z et al. Eur Urol Open Sci (2022)
 Prostate cancer prostate carcinoma 232
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002796/ScoringFiles/PGS002796.txt.gz
PGS001806
(portability-PLR_187.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Malignant neoplasm of testis testicular neoplasm 231
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001806/ScoringFiles/PGS001806.txt.gz
PGS001688
(GBE_INI25704)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ISOVF in tract acoustic radiation (L) neuroimaging measurement,
brain volume		 231
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001688/ScoringFiles/PGS001688.txt.gz
PGS000770
(PRS231)
 PGP000177 |
de Toro-Martín J et al. Front Genet (2019)
 Body mass index (BMI) body mass index 231
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000770/ScoringFiles/PGS000770.txt.gz
PGS003708
(L_presubiculum_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left presubiculum body volume presubiculum volume 231
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003708/ScoringFiles/PGS003708.txt.gz
PGS003825
(TC_EAS_CT)
 PGP000489 |
Zhang H et al. Nat Genet (2023)
 Total cholesterol total cholesterol measurement 230
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003825/ScoringFiles/PGS003825.txt.gz
PGS000345
(PRS229_BC)
 PGP000112 |
Ho WK et al. Nat Commun (2020)
 Breast cancer breast carcinoma 229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000345/ScoringFiles/PGS000345.txt.gz
PGS003097
(ExPRSweb_T2D_29358691-GCST005413_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003097/ScoringFiles/PGS003097.txt.gz
PGS000658
(PRS-TC)
 PGP000121 |
Tam CHT et al. Genome Med (2021)
 Total cholesterol total cholesterol measurement 229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000658/ScoringFiles/PGS000658.txt.gz
PGS000040
(GRS_CeD)
 PGP000028 |
Abraham G et al. PLoS Genet (2014)
 Coeliac disease celiac disease 228
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000040/ScoringFiles/PGS000040.txt.gz
PGS001042
(GBE_HC645)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Thyrotoxicosis [hyperthyroidism] (time-to-event) Thyrotoxicosis 226
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001042/ScoringFiles/PGS001042.txt.gz
PGS000175
(mchc)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Mean corpuscular hemoglobin concentration mean corpuscular hemoglobin concentration 224
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000175/ScoringFiles/PGS000175.txt.gz
Showing 4101 to 4150 of 5221 rows