Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000195
(G-PROB_Raneg)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Rheumatoid arthritis (CCP-negative) ACPA-negative rheumatoid arthritis 96
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000195/ScoringFiles/PGS000195.txt.gz
PGS001138
(GBE_BIN10030820)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Rheumatoid factor [> 16 IU/mL] rheumatoid factor measurement 456
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001138/ScoringFiles/PGS001138.txt.gz
PGS000326
(GRS-JIA-RFN-20)
 PGP000052 |
Cánovas R et al. Ann Rheum Dis (2020)
 Rheumatoid-factor-negative Polyarthritis (Juvenile Idiophatic Arthritis) rheumatoid factor-negative juvenile idiopathic arthritis 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000326/ScoringFiles/PGS000326.txt.gz
PGS001235
(GBE_INI23122)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Right arm mass (predicted) body weights and measures 28,988
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001235/ScoringFiles/PGS001235.txt.gz
PGS003611
(R_CA1_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 body volume hippocampal CA1 volume 7,104
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003611/ScoringFiles/PGS003611.txt.gz
PGS003615
(R_CA1_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 body volume hippocampal CA1 volume 123,648
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003615/ScoringFiles/PGS003615.txt.gz
PGS003619
(R_CA1_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 body volume hippocampal CA1 volume 189
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003619/ScoringFiles/PGS003619.txt.gz
PGS003612
(R_CA1_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 head volume hippocampal CA1 volume 6,252
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003612/ScoringFiles/PGS003612.txt.gz
PGS003616
(R_CA1_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 head volume hippocampal CA1 volume 19,937
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003616/ScoringFiles/PGS003616.txt.gz
PGS003620
(R_CA1_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA1 head volume hippocampal CA1 volume 19,628
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003620/ScoringFiles/PGS003620.txt.gz
PGS003623
(R_CA3_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 body volume hippocampal CA3 volume 9,398
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003623/ScoringFiles/PGS003623.txt.gz
PGS003627
(R_CA3_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 body volume hippocampal CA3 volume 3,205
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003627/ScoringFiles/PGS003627.txt.gz
PGS003631
(R_CA3_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 body volume hippocampal CA3 volume 6,731
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003631/ScoringFiles/PGS003631.txt.gz
PGS003624
(R_CA3_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 head volume hippocampal CA3 volume 594
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003624/ScoringFiles/PGS003624.txt.gz
PGS003628
(R_CA3_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 head volume hippocampal CA3 volume 19,760
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003628/ScoringFiles/PGS003628.txt.gz
PGS003632
(R_CA3_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA3 head volume hippocampal CA3 volume 38,665
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003632/ScoringFiles/PGS003632.txt.gz
PGS003636
(R_CA4_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 body volume hippocampal CA4 volume 3,322
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003636/ScoringFiles/PGS003636.txt.gz
PGS003640
(R_CA4_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 body volume hippocampal CA4 volume 497
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003640/ScoringFiles/PGS003640.txt.gz
PGS003644
(R_CA4_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 body volume hippocampal CA4 volume 10,113
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003644/ScoringFiles/PGS003644.txt.gz
PGS003635
(R_CA4_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 head volume hippocampal CA4 volume 12,506
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003635/ScoringFiles/PGS003635.txt.gz
PGS003639
(R_CA4_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 head volume hippocampal CA4 volume 3,200
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003639/ScoringFiles/PGS003639.txt.gz
PGS003643
(R_CA4_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right CA4 head volume hippocampal CA4 volume 73,791
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003643/ScoringFiles/PGS003643.txt.gz
PGS003676
(R_fimbria_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right fimbria volume hippocampus fimbria volume 39,045
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003676/ScoringFiles/PGS003676.txt.gz
PGS003678
(R_fimbria_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right fimbria volume hippocampus fimbria volume 70,659
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003678/ScoringFiles/PGS003678.txt.gz
PGS003680
(R_fimbria_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right fimbria volume hippocampus fimbria volume 13,970
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003680/ScoringFiles/PGS003680.txt.gz
PGS003594
(R_GC-ML-DG_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus body volume dentate gyrus volume 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003594/ScoringFiles/PGS003594.txt.gz
PGS003598
(R_GC-ML-DG_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus body volume dentate gyrus volume 3,904
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003598/ScoringFiles/PGS003598.txt.gz
PGS003602
(R_GC-ML-DG_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus body volume dentate gyrus volume 10,104
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003602/ScoringFiles/PGS003602.txt.gz
PGS003593
(R_GC-ML-DG_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus head volume dentate gyrus volume 15,738
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003593/ScoringFiles/PGS003593.txt.gz
PGS003597
(R_GC-ML-DG_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus head volume dentate gyrus volume 283
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003597/ScoringFiles/PGS003597.txt.gz
PGS003601
(R_GC-ML-DG_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus head volume dentate gyrus volume 48,751
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003601/ScoringFiles/PGS003601.txt.gz
PGS001120
(GBE_INI47)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Right hand grip strength grip strength measurement 12,644
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001120/ScoringFiles/PGS001120.txt.gz
PGS001039
(GBE_INI4125)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Right heel bone mineral density (BMD) T-score, automated heel bone mineral density 9,753
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001039/ScoringFiles/PGS001039.txt.gz
PGS000955
(GBE_INI4120)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Right heel broadband ultrasound attenuation bone quantitative ultrasound measurement 7,069
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000955/ScoringFiles/PGS000955.txt.gz
PGS000956
(GBE_INI4123)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Right heel quantitative ultrasound index (QUI), direct entry bone quantitative ultrasound measurement 9,756
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000956/ScoringFiles/PGS000956.txt.gz
PGS003661
(R_hippocampal_body_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal body volume hippocampal volume 279
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003661/ScoringFiles/PGS003661.txt.gz
PGS003667
(R_hippocampal_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal body volume hippocampal volume 2,784
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003667/ScoringFiles/PGS003667.txt.gz
PGS003673
(R_hippocampal_body_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal body volume hippocampal volume 37,159
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003673/ScoringFiles/PGS003673.txt.gz
PGS003646
(R_hippocampal_fissure_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal fissure volume hippocampal fissure volume 3,822
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003646/ScoringFiles/PGS003646.txt.gz
PGS003648
(R_hippocampal_fissure_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal fissure volume hippocampal fissure volume 9,700
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003648/ScoringFiles/PGS003648.txt.gz
PGS003650
(R_hippocampal_fissure_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal fissure volume hippocampal fissure volume 88,296
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003650/ScoringFiles/PGS003650.txt.gz
PGS003662
(R_hippocampal_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal head volume hippocampal volume 8,431
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003662/ScoringFiles/PGS003662.txt.gz
PGS003668
(R_hippocampal_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal head volume hippocampal volume 2,502
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003668/ScoringFiles/PGS003668.txt.gz
PGS003674
(R_hippocampal_head_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal head volume hippocampal volume 79,660
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003674/ScoringFiles/PGS003674.txt.gz
PGS003652
(R_hippocampal_tail_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal tail volume hippocampal formation volume 25
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003652/ScoringFiles/PGS003652.txt.gz
PGS003654
(R_hippocampal_tail_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal tail volume hippocampal formation volume 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003654/ScoringFiles/PGS003654.txt.gz
PGS003656
(R_hippocampal_tail_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal tail volume hippocampal formation volume 6,924
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003656/ScoringFiles/PGS003656.txt.gz
PGS003604
(R_HATA_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampus-amygdala transition area volume hippocampal amigdala transition area volume 1,363
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003604/ScoringFiles/PGS003604.txt.gz
PGS003606
(R_HATA_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampus-amygdala transition area volume hippocampal amigdala transition area volume 61,932
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003606/ScoringFiles/PGS003606.txt.gz
PGS003608
(R_HATA_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampus-amygdala transition area volume hippocampal amigdala transition area volume 138,503
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003608/ScoringFiles/PGS003608.txt.gz
Showing 4101 to 4150 of 5450 rows