Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003739
(PRS81_CoC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Colorectal cancer colorectal carcinoma 81
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003739/ScoringFiles/PGS003739.txt.gz
PGS003850
(CRC_PRS_200loci)
 PGP000491 |
Fernandez-Rozadilla C et al. Nat Genet (2022)
 Colorectal cancer colorectal cancer 205
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003850/ScoringFiles/PGS003850.txt.gz
PGS003851
(CRC_PRS_EUR)
 PGP000294 |
Thomas M et al. Am J Hum Genet (2020)
 Colorectal cancer colorectal cancer 1,180,765
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003851/ScoringFiles/PGS003851.txt.gz
PGS003852
(CRC_PRS_EUR_EAS)
 PGP000492 |
Thomas M et al. Nat Commun (2023)
 Colorectal cancer colorectal cancer 1,016,596
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003852/ScoringFiles/PGS003852.txt.gz
PGS003979
(CRC_PRSCS)
 PGP000515 |
Tamlander M et al. Br J Cancer (2023)
 Colorectal cancer colorectal carcinoma 1,088,133
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003979/ScoringFiles/PGS003979.txt.gz
PGS004240
(PRS89_CRC)
 PGP000541 |
Fan L et al. Int J Cancer (2023)
 Colorectal cancer colorectal carcinoma 89
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004240/ScoringFiles/PGS004240.txt.gz
PGS004243
(PRS67_colorectum)
 PGP000542 |
Kim ES et al. NPJ Precis Oncol (2023)
 Colorectal cancer colorectal carcinoma 67
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004243/ScoringFiles/PGS004243.txt.gz
PGS004300
(GenoBoost_colorectal_cancer_0)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 70
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004300/ScoringFiles/PGS004300.txt.gz
PGS004301
(GenoBoost_colorectal_cancer_1)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 600
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004301/ScoringFiles/PGS004301.txt.gz
PGS004302
(GenoBoost_colorectal_cancer_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 300
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004302/ScoringFiles/PGS004302.txt.gz
PGS004303
(GenoBoost_colorectal_cancer_3)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 200
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004303/ScoringFiles/PGS004303.txt.gz
PGS004304
(GenoBoost_colorectal_cancer_4)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 700
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004304/ScoringFiles/PGS004304.txt.gz
PGS004580
(CRC_PRSCS)
 PGP000562 |
Youssef O et al. Lab Invest (2024)
 Colorectal cancer colorectal carcinoma 1,099,906
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004580/ScoringFiles/PGS004580.txt.gz
PGS004586
(PPS_CRC)
 PGP000564 |
Xin J et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 287
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004586/ScoringFiles/PGS004586.txt.gz
PGS004689
(colorectal_cancer)
 PGP000596 |
Hu J et al. JNCI Cancer Spectr (2024)
 Colorectal cancer colorectal carcinoma 1,077,789
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004689/ScoringFiles/PGS004689.txt.gz
PGS004880
(INTERVENE_MegaPRS_Colorectal_cancer)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Colorectal cancer colorectal carcinoma 843,248
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004880/ScoringFiles/PGS004880.txt.gz
PGS004904
(PRS127_CRC)
 PGP000636 |
Jiang F et al. Int J Cancer (2023)
 Colorectal cancer colorectal carcinoma 127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004904/ScoringFiles/PGS004904.txt.gz
PGS004945
(PRS87_CRC)
 PGP000671 |
Gao P et al. Int J Cancer (2023)
 Colorectal cancer colorectal cancer 87
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004945/ScoringFiles/PGS004945.txt.gz
PGS005162
(PRS-CRC)
 PGP000711 |
Zhu M et al. PLoS Med (2025)
 Colorectal cancer colorectal carcinoma 11,462
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005162/ScoringFiles/PGS005162.txt.gz
PGS005275
(CRC_PRS_JPHC_JPGWAS)
 PGP000749 |
Nakano S et al. Cancer Epidemiol (2025)
 Colorectal cancer colorectal carcinoma 104,677
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005275/ScoringFiles/PGS005275.txt.gz
PGS005151
(Colon polyp (CT-SLEB; EAS+EUR))
 PGP000704 |
Jung HU et al. Commun Biol (2025)
 Colon polyp polyp of colon 496,139
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005151/ScoringFiles/PGS005151.txt.gz
PGS000376
(PRSWEB_PHECODE153.2_C18_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Colon cancer colon carcinoma 1,111,490
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000376/ScoringFiles/PGS000376.txt.gz
PGS000377
(PRSWEB_PHECODE153.2_C18_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Colon cancer colon carcinoma 5,740,814
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000377/ScoringFiles/PGS000377.txt.gz
PGS000378
(PRSWEB_PHECODE153.2_C3-COLON_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Colon cancer colon carcinoma 1,111,399
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000378/ScoringFiles/PGS000378.txt.gz
PGS000379
(PRSWEB_PHECODE153.2_C3-COLON_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Colon cancer colon carcinoma 5,715,093
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000379/ScoringFiles/PGS000379.txt.gz
PGS000380
(PRSWEB_PHECODE153.2_UKBB-SAIGE-HRC-X153.2_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Colon cancer colon carcinoma 1,119,238
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000380/ScoringFiles/PGS000380.txt.gz
PGS000381
(PRSWEB_PHECODE153.2_UKBB-SAIGE-HRC-X153.2_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Colon cancer colon carcinoma 12
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000381/ScoringFiles/PGS000381.txt.gz
PGS000382
(PRSWEB_PHECODE153.2_UKBB-SAIGE-HRC-X153.2_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Colon cancer colon carcinoma 150
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000382/ScoringFiles/PGS000382.txt.gz
PGS002319
(cov_EDU_COLLEGE.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002319/ScoringFiles/PGS002319.txt.gz
PGS002391
(cov_EDU_COLLEGE.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 6,535
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002391/ScoringFiles/PGS002391.txt.gz
PGS002440
(cov_EDU_COLLEGE.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 24,405
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002440/ScoringFiles/PGS002440.txt.gz
PGS002489
(cov_EDU_COLLEGE.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 126,911
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002489/ScoringFiles/PGS002489.txt.gz
PGS002538
(cov_EDU_COLLEGE.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 1,136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002538/ScoringFiles/PGS002538.txt.gz
PGS002587
(cov_EDU_COLLEGE.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 514
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002587/ScoringFiles/PGS002587.txt.gz
PGS002636
(cov_EDU_COLLEGE.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 577,448
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002636/ScoringFiles/PGS002636.txt.gz
PGS002685
(cov_EDU_COLLEGE.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 College education educational attainment 980,529
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002685/ScoringFiles/PGS002685.txt.gz
PGS001126
(GBE_INI1498)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Coffee intake coffee consumption measurement 3,154
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001126/ScoringFiles/PGS001126.txt.gz
PGS001125
(GBE_BIN_FC20001508)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Coffee consumption (instant coffee) coffee consumption measurement 432
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001125/ScoringFiles/PGS001125.txt.gz
PGS001124
(GBE_BIN_FC30001508)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Coffee consumption (ground coffee) coffee consumption measurement 9,694
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001124/ScoringFiles/PGS001124.txt.gz
PGS001123
(GBE_BIN100240)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Coffee consumption coffee consumption measurement 48
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001123/ScoringFiles/PGS001123.txt.gz
PGS000040
(GRS_CeD)
 PGP000028 |
Abraham G et al. PLoS Genet (2014)
 Coeliac disease celiac disease 228
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000040/ScoringFiles/PGS000040.txt.gz
PGS000041
(GRS-DQ2.5-CeD)
 PGP000029 |
Abraham G et al. Genome Med (2015)
 Coeliac disease celiac disease 2,513
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000041/ScoringFiles/PGS000041.txt.gz
PGS000042
(GRS-DQ2.5-CeD-imputed)
 PGP000029 |
Abraham G et al. Genome Med (2015)
 Coeliac disease celiac disease 3,317
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000042/ScoringFiles/PGS000042.txt.gz
PGS000316
(GRS42_Coeliac)
 PGP000093 |
Sharp SA et al. Aliment Pharmacol Ther (2020)
 Coeliac disease celiac disease 53
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000316/ScoringFiles/PGS000316.txt.gz
PGS001777
(3-SNP_cirr)
 PGP000258 |
Whitfield JB et al. J Hepatol (2021)
 Cirrhosis (alcohol related) alcoholic liver cirrhosis 3
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001777/ScoringFiles/PGS001777.txt.gz
PGS000726
(PGS12_CIR)
 PGP000136 |
Emdin CA et al. Gastroenterology (2020)
 Cirrhosis cirrhosis of liver 12
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000726/ScoringFiles/PGS000726.txt.gz
PGS000776
(GRS9_Cirr)
 PGP000180 |
Innes H et al. Gastroenterology (2020)
 Cirrhosis cirrhosis of liver 9
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000776/ScoringFiles/PGS000776.txt.gz
PGS004621
(cirrhosis_pgs_eur)
 PGP000594 |
Ghouse J et al. Nat Genet (2024)
 Cirrhosis cirrhosis of liver 1,089,806
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004621/ScoringFiles/PGS004621.txt.gz
PGS001847
(portability-PLR_459.9)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Circulatory disease NEC vascular disease 594
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001847/ScoringFiles/PGS001847.txt.gz
PGS002059
(portability-ldpred2_459.9)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Circulatory disease NEC vascular disease 604,572
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002059/ScoringFiles/PGS002059.txt.gz
Showing 4201 to 4250 of 5198 rows