Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001079
(GBE_INI30110)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Platelet distribution width platelet component distribution width 18,814
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001079/ScoringFiles/PGS001079.txt.gz
PGS018938
(TPMI_296.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Depression depressive disorder 18,793
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018938/ScoringFiles/PGS018938.txt.gz
PGS019759
(TPMI_790.6_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other abnormal blood chemistry Abnormal circulating sodium concentration 18,692
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019759/ScoringFiles/PGS019759.txt.gz
PGS000691
(snpnet.Non_albumin_protein)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Non-albumin protein [g/L] level of serum globulin type protein 18,670
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000691/ScoringFiles/PGS000691.txt.gz - Check Terms/Licenses
PGS000672
(snpnet.Apolipoprotein_B_adjstatins)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Apolipoprotein B [g/L] (statin adjusted) apolipoprotein B measurement 18,666
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000672/ScoringFiles/PGS000672.txt.gz - Check Terms/Licenses
PGS003938
(INI30140)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Neutrophil count neutrophil count 18,612
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003938/ScoringFiles/PGS003938.txt.gz
PGS018632
(TPMI_225_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Benign neoplasm of brain and other parts of nervous system benign neoplasm of peripheral nervous system 18,584
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018632/ScoringFiles/PGS018632.txt.gz
PGS004193
(hyper_3)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Hypertension hypertensive disorder 18,580
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004193/ScoringFiles/PGS004193.txt.gz
PGS018998
(TPMI_352.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Facial nerve disorders CN7 facial nerve disorder 18,580
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018998/ScoringFiles/PGS018998.txt.gz
PGS002417
(blood_RED_COUNT.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 18,514
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002417/ScoringFiles/PGS002417.txt.gz
PGS019165
(TPMI_411.4_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Coronary atherosclerosis coronary atherosclerosis 18,489
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019165/ScoringFiles/PGS019165.txt.gz
PGS019754
(TPMI_790_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nonspecific findings on examination of blood abnormal result of function studies 18,474
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019754/ScoringFiles/PGS019754.txt.gz
PGS000539
(PRSWEB_PHECODE174.1_iCOGS-Overall-BRCA_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 18,356
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000539/ScoringFiles/PGS000539.txt.gz
PGS000670
(snpnet.Alkaline_phosphatase)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Alkaline phosphatase [U/L] alkaline phosphatase measurement 18,328
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000670/ScoringFiles/PGS000670.txt.gz - Check Terms/Licenses
PGS019123
(TPMI_389.4_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Tinnitus Tinnitus 18,193
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019123/ScoringFiles/PGS019123.txt.gz
PGS001914
(portability-PLR_F_log_testosterone)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Testosterone (female only) testosterone measurement,
female		 18,179
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001914/ScoringFiles/PGS001914.txt.gz
PGS002402
(pigment_HAIR.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Hair color strand of hair color 18,096
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002402/ScoringFiles/PGS002402.txt.gz
PGS002960
(ExPRSweb_HDL_30760-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 HDL cholesterol high density lipoprotein cholesterol measurement 17,935
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002960/ScoringFiles/PGS002960.txt.gz
PGS003924
(INI30000)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 White blood cell (leukocyte) count leukocyte quantity 17,890
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003924/ScoringFiles/PGS003924.txt.gz
PGS019108
(TPMI_386.21_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Central origin vertigo Vertigo 17,870
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019108/ScoringFiles/PGS019108.txt.gz
PGS000096
(irf)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Immature fraction of reticulocytes reticulocyte count 17,850
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000096/ScoringFiles/PGS000096.txt.gz
PGS018457
(TPMI_145_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Oral cavity cancer oral cavity cancer 17,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018457/ScoringFiles/PGS018457.txt.gz
PGS002469
(cov_SMOKING_STATUS.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Smoking status smoking status measurement 17,774
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002469/ScoringFiles/PGS002469.txt.gz
PGS001236
(GBE_INI3063)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Lung function (FEV1) forced expiratory volume 17,732
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001236/ScoringFiles/PGS001236.txt.gz
PGS002457
(disease_HYPOTHYROIDISM_SELF_REP.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Hypothyroidism hypothyroidism 17,519
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002457/ScoringFiles/PGS002457.txt.gz
PGS003704
(L_presubiculum_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left presubiculum body volume presubiculum volume 17,508
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003704/ScoringFiles/PGS003704.txt.gz
PGS019460
(TPMI_591_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Urinary tract infection urinary tract infection 17,479
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019460/ScoringFiles/PGS019460.txt.gz
PGS000682
(snpnet.eGFR)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 eGFR [ml/min/1.73m2] glomerular filtration rate 17,467
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000682/ScoringFiles/PGS000682.txt.gz - Check Terms/Licenses
PGS019636
(TPMI_706.1_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Acne acne 17,458
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019636/ScoringFiles/PGS019636.txt.gz
PGS003685
(L_molecular_layer_HP_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left molecular layer hippocampus proper head volume hippocampus molecular layer volume 17,451
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003685/ScoringFiles/PGS003685.txt.gz
PGS002413
(blood_MONOCYTE_COUNT.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Monocyte count monocyte count 17,405
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002413/ScoringFiles/PGS002413.txt.gz
PGS000675
(snpnet.C_reactive_protein)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 C-reactive protein [mg/L] C-reactive protein measurement 17,378
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000675/ScoringFiles/PGS000675.txt.gz - Check Terms/Licenses
PGS001877
(portability-PLR_716)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Other arthropathies Arthropathy 17,363
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001877/ScoringFiles/PGS001877.txt.gz
PGS019277
(TPMI_476_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Allergic rhinitis allergic rhinitis 17,340
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019277/ScoringFiles/PGS019277.txt.gz
PGS000683
(snpnet.Gamma_glutamyltransferase)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gamma-glutamyl transferase [U/L] serum gamma-glutamyl transferase measurement 17,323
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000683/ScoringFiles/PGS000683.txt.gz - Check Terms/Licenses
PGS001220
(GBE_INI30040)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean corpuscular volume erythrocyte volume 17,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001220/ScoringFiles/PGS001220.txt.gz
PGS001993
(portability-PLR_more_sunscreen)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Use of sun/uv protection sun exposure measurement 17,282
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001993/ScoringFiles/PGS001993.txt.gz
PGS003759
(BrCa_PRS_JPHC_EURGWAS)
 PGP000478 |
Ohbe H et al. Breast Cancer Res Treat (2022)
 Breast cancer breast carcinoma 17,252
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003759/ScoringFiles/PGS003759.txt.gz
PGS003944
(INI30210)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Eosinophil percentage eosinophil percentage of leukocytes 17,227
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003944/ScoringFiles/PGS003944.txt.gz
PGS000677
(snpnet.Cholesterol_adjstatins)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Cholesterol [mmol/L] (statin adjusted) total cholesterol measurement 17,204
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000677/ScoringFiles/PGS000677.txt.gz - Check Terms/Licenses
PGS004932
(high_density_lipoprotein_cholesterol_measurement_combined)
 PGP000665 |
Moreno-Grau S et al. Human Genomics (2024)
 HDL cholesterol high density lipoprotein cholesterol measurement 17,151
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004932/ScoringFiles/PGS004932.txt.gz
PGS003065
(ExPRSweb_Smoking_SmokingInitiation_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Smoking status smoking status measurement 17,138
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003065/ScoringFiles/PGS003065.txt.gz
PGS003929
(INI30050)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Mean corpuscular hemoglobin mean corpuscular hemoglobin 17,127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003929/ScoringFiles/PGS003929.txt.gz
PGS002418
(blood_RBC_DISTRIB_WIDTH.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 16,996
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002418/ScoringFiles/PGS002418.txt.gz
PGS001889
(portability-PLR_apoB)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Apolipoprotein B apolipoprotein B measurement 16,952
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001889/ScoringFiles/PGS001889.txt.gz
PGS019724
(TPMI_743_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Osteoporosis osteopenia and pathological fracture osteoporosis,
bone fracture		 16,942
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019724/ScoringFiles/PGS019724.txt.gz
PGS003943
(INI30200)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Neutrophil percentage neutrophil percentage of leukocytes 16,931
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003943/ScoringFiles/PGS003943.txt.gz
PGS003939
(INI30150)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Eosinophil count eosinophil count 16,859
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003939/ScoringFiles/PGS003939.txt.gz
PGS002476
(biochemistry_VitaminD.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D level 16,848
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002476/ScoringFiles/PGS002476.txt.gz
PGS002444
(disease_ALLERGY_ECZEMA_DIAGNOSED.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Eczema Eczematoid dermatitis 16,802
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002444/ScoringFiles/PGS002444.txt.gz
Showing 4201 to 4250 of 6982 rows