Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS005231
(GRS142_CAD)
 PGP000738 |
Severance LM et al. JACC Cardiovasc Imaging (2021)
 Coronary artery disease coronary artery disorder 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005231/ScoringFiles/PGS005231.txt.gz
PGS002252
(PRS_CRC)
 PGP000279 |
Archambault AN et al. J Natl Cancer Inst (2022)
 Colorectal cancer colorectal cancer 141
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002252/ScoringFiles/PGS002252.txt.gz
PGS000759
(hypoT)
 PGP000164 |
Khan Z et al. Nat Commun (2021)
 Hypothyroidism hypothyroidism 140
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000759/ScoringFiles/PGS000759.txt.gz
PGS002265
(PRS140_CRC)
 PGP000294 |
Thomas M et al. Am J Hum Genet (2020)
 Colorectal cancer colorectal cancer 140
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002265/ScoringFiles/PGS002265.txt.gz
PGS003439
(PRSCC_140)
 PGP000441 |
Su YR et al. Cancer Epidemiol Biomarkers Prev (2023)
 Colorectal cancer colorectal cancer 140
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003439/ScoringFiles/PGS003439.txt.gz
PGS004295
(GenoBoost_breast_cancer_0)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Breast cancer breast carcinoma 140
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004295/ScoringFiles/PGS004295.txt.gz
PGS001347
(GBE_FH1263)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Family history of Alzheimer's/dementia family history of Alzheimer’s disease 139
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001347/ScoringFiles/PGS001347.txt.gz
PGS004105
(pt_clump.auto.GCST004131.IBD)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Inflammatory bowel disease (IBD) inflammatory bowel disease 139
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004105/ScoringFiles/PGS004105.txt.gz
PGS004223
(PRS139_T2D)
 PGP000523 |
Lin J et al. Sci Total Environ (2023)
 Type 2 diabetes type 2 diabetes mellitus 139
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004223/ScoringFiles/PGS004223.txt.gz
PGS000324
(GRS-JIA-ERA-20)
 PGP000052 |
Cánovas R et al. Ann Rheum Dis (2020)
 Enthesitis-related Juvenile Idiophatic Arthritis enthesitis-related juvenile idiopathic arthritis 138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000324/ScoringFiles/PGS000324.txt.gz
PGS000818
(GRS_Metabo)
 PGP000202 |
Bauer A et al. Genet Epidemiol (2021)
 Coronary heart disease coronary artery disorder 138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000818/ScoringFiles/PGS000818.txt.gz
PGS002799
(GRS138_EA)
 PGP000379 |
Shi Z et al. Eur Urol Open Sci (2022)
 Prostate cancer prostate carcinoma 138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002799/ScoringFiles/PGS002799.txt.gz
PGS002838
(ExPRSweb_Alcohol_DrinksPerWeek_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Alcohol consumption alcohol consumption quality 137
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002838/ScoringFiles/PGS002838.txt.gz
PGS000810
(wGRS136_Allergy)
 PGP000195 |
Ferreira MA et al. Nat Genet (2017)
 Allergic disease (asthma, hay fever or eczema) allergic disease 136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000810/ScoringFiles/PGS000810.txt.gz
PGS001686
(GBE_INI25675)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract uncinate fasciculus (L) neuroimaging measurement,
brain volume		 136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001686/ScoringFiles/PGS001686.txt.gz
PGS003398
(PRS-136EUR)
 PGP000415 |
Jee YH et al. Int J Epidemiol (2022)
 Breast cancer breast carcinoma 136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003398/ScoringFiles/PGS003398.txt.gz
PGS003738
(PRS136_BC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Breast cancer breast carcinoma 136
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003738/ScoringFiles/PGS003738.txt.gz
PGS000780
(PRS135_allergy)
 PGP000184 |
Clark H et al. Clin Exp Allergy (2019)
 Allergic disease allergic disease 135
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000780/ScoringFiles/PGS000780.txt.gz
PGS000719
(PRS_Prostate)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Prostate cancer prostate carcinoma 134
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000719/ScoringFiles/PGS000719.txt.gz
PGS000800
(GRSw_SHARE)
 PGP000189 |
Dijk FN et al. J Allergy Clin Immunol (2019)
 Allergic disease allergic disease 133
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000800/ScoringFiles/PGS000800.txt.gz
PGS003391
(best_LUCA)
 PGP000413 |
Namba S et al. Cancer Res (2022)
 Lung cancer lung carcinoma 133
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003391/ScoringFiles/PGS003391.txt.gz
PGS001869
(portability-PLR_681)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Superficial cellulitis and abscess cellulitis 131
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001869/ScoringFiles/PGS001869.txt.gz
PGS004117
(pt_clump.auto.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 131
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004117/ScoringFiles/PGS004117.txt.gz
PGS001690
(GBE_INI25707)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ISOVF in tract anterior thalamic radiation (R) neuroimaging measurement,
brain volume		 130
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001690/ScoringFiles/PGS001690.txt.gz
PGS005205
(PRS130_Pca)
 PGP000726 |
Benafif S et al. BJU Int (2021)
 Prostate cancer prostate carcinoma 130
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005205/ScoringFiles/PGS005205.txt.gz
PGS000934
(GBE_HC156)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Nasal polyps Nasal polyposis 129
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000934/ScoringFiles/PGS000934.txt.gz
PGS003859
(GRS129_insomnia)
 PGP000497 |
Gibson MJ et al. BMC Med (2023)
 Insomnia insomnia measurement 129
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003859/ScoringFiles/PGS003859.txt.gz
PGS000740
(PRS128_LC)
 PGP000148 |
Hung RJ et al. Cancer Res (2021)
 Lung cancer lung carcinoma 128
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000740/ScoringFiles/PGS000740.txt.gz
PGS002798
(GRS128_Afr)
 PGP000379 |
Shi Z et al. Eur Urol Open Sci (2022)
 Prostate cancer prostate carcinoma 128
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002798/ScoringFiles/PGS002798.txt.gz
PGS003378
(PSA_PGS_128)
 PGP000412 |
Kachuri L et al. Nat Med (2023)
 Prostate-specific antigen (PSA) levels prostate specific antigen amount 128
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003378/ScoringFiles/PGS003378.txt.gz
PGS000809
(PRS127_MS)
 PGP000194 |
Barnes CLK et al. Eur J Hum Genet (2021)
 Multiple sclerosis multiple sclerosis 127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000809/ScoringFiles/PGS000809.txt.gz
PGS002741
(GRS127_POAG_META)
 PGP000352 |
Waksmunski AR et al. Ophthalmology (2022)
 Primary open-angle glaucoma open-angle glaucoma 127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002741/ScoringFiles/PGS002741.txt.gz
PGS004904
(PRS127_CRC)
 PGP000636 |
Jiang F et al. Int J Cancer (2023)
 Colorectal cancer colorectal carcinoma 127
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004904/ScoringFiles/PGS004904.txt.gz
PGS002791
(PRS126_Pca)
 PGP000371 |
Ruan X et al. Prostate (2022)
 Prostate cancer prostate carcinoma 126
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002791/ScoringFiles/PGS002791.txt.gz
PGS004251
(PRS125_prostate)
 PGP000542 |
Kim ES et al. NPJ Precis Oncol (2023)
 Prostate cancer prostate carcinoma 125
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004251/ScoringFiles/PGS004251.txt.gz
PGS003458
(PRS_AT)
 PGP000451 |
Al-Janabi A et al. J Invest Dermatol (2023)
 General atopic disease allergic disease 124
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003458/ScoringFiles/PGS003458.txt.gz
PGS001028
(GBE_BIN_FC1006148)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Diabetic eye disease diabetic eye disease 123
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001028/ScoringFiles/PGS001028.txt.gz
PGS000579
(PRSWEB_PHECODE185_GWAS-Catalog-r2019-05-03-X185_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 122
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000579/ScoringFiles/PGS000579.txt.gz
PGS000841
(BMI)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Body mass index (BMI) body mass index 122
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000841/ScoringFiles/PGS000841.txt.gz
PGS003755
(wGRS_SLE)
 PGP000475 |
Kwon YC et al. Arthritis Rheumatol (2023)
 Systemic lupus erythematosus systemic lupus erythematosus 122
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003755/ScoringFiles/PGS003755.txt.gz
PGS001305
(GBE_HC608)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Vitamin B12 deficiency induced anemia (time-to-event) anemia,
vitamin B12 deficiency		 121
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001305/ScoringFiles/PGS001305.txt.gz
PGS005402
(PRS121)
 PGP000783 |
Chen H et al. Genome Med (2026)
 Colorectal cancer colorectal cancer 121
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005402/ScoringFiles/PGS005402.txt.gz
PGS000064
(GLGC2017_HDL)
 PGP000046 |
Kuchenbaecker K et al. Nat Commun (2019)
 HDL cholesterol high density lipoprotein cholesterol measurement 120
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000064/ScoringFiles/PGS000064.txt.gz
PGS000478
(PRSWEB_PHECODE174.1_C3-BREAST-3_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 120
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000478/ScoringFiles/PGS000478.txt.gz
PGS000580
(PRSWEB_PHECODE185_GWAS-Catalog-r2019-05-03-X185_PT_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 118
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000580/ScoringFiles/PGS000580.txt.gz
PGS000930
(GBE_BIN_FC3006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Blood clot (diagnosed by doctor) thrombotic disease 118
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000930/ScoringFiles/PGS000930.txt.gz
PGS001027
(GBE_HC1228)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Internal derangement of knee (time-to-event) knee injury 118
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001027/ScoringFiles/PGS001027.txt.gz
PGS003110
(ExPRSweb_T2D_29358691-GCST005413_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 118
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003110/ScoringFiles/PGS003110.txt.gz
PGS003743
(PRS118_PrC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Prostate cancer prostate carcinoma 118
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003743/ScoringFiles/PGS003743.txt.gz
PGS000577
(PRSWEB_PHECODE185_GWAS-Catalog-r2019-05-03-X185_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 117
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000577/ScoringFiles/PGS000577.txt.gz
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