Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000785
(CC_Colorectal_IV)
 PGP000186 |
Kachuri L et al. Nat Commun (2020)
 Colorectal cancer colorectal cancer 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000785/ScoringFiles/PGS000785.txt.gz
PGS004319
(GRS103_BMI)
 PGP000549 |
Fernández-Rhodes L et al. Psychosom Med (2023)
 Body mass index body mass index 103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004319/ScoringFiles/PGS004319.txt.gz
PGS003350
(ALLGRS_TC)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Total cholesterol total cholesterol measurement 102
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003350/ScoringFiles/PGS003350.txt.gz
PGS004599
(PRS102_Pca)
 PGP000577 |
Ruan X et al. J Clin Med (2023)
 Prostate cancer prostate carcinoma 102
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004599/ScoringFiles/PGS004599.txt.gz
PGS000066
(GLGC2017_TG)
 PGP000046 |
Kuchenbaecker K et al. Nat Commun (2019)
 Triglycerides (TG) triglyceride measurement 101
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000066/ScoringFiles/PGS000066.txt.gz
PGS000571
(PRSWEB_PHECODE185_C3-PROSTATE_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Prostate cancer prostate carcinoma 100
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000571/ScoringFiles/PGS000571.txt.gz
PGS003420
(PRS100_PRScs)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003420/ScoringFiles/PGS003420.txt.gz
PGS003423
(PRS100_Lassosum)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003423/ScoringFiles/PGS003423.txt.gz
PGS003424
(PRS100_LDpred2)
 PGP000431 |
Ko CL et al. J Transl Med (2022)
 Ankylosing spondylitis ankylosing spondylitis 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003424/ScoringFiles/PGS003424.txt.gz
PGS004272
(GenoBoost_inflammatory_bowel_disease_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Inflammatory bowel disease inflammatory bowel disease 100
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004272/ScoringFiles/PGS004272.txt.gz
PGS002921
(ExPRSweb_Estradiol_30800-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estradiol estradiol measurement 98
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002921/ScoringFiles/PGS002921.txt.gz
PGS003705
(R_presubiculum_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right presubiculum head volume presubiculum volume 98
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003705/ScoringFiles/PGS003705.txt.gz
PGS000034
(GRS_BMI)
 PGP000021 |
Song M et al. Diabetes (2017)
 Adult body mass index (BMI) body mass index 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000034/ScoringFiles/PGS000034.txt.gz
PGS000338
(GRS97_AF)
 PGP000105 |
Kloosterman M et al. Eur J Heart Fail (2020)
 Atrial fibrillation atrial fibrillation 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000338/ScoringFiles/PGS000338.txt.gz
PGS000594
(PRSWEB_PHECODE187_C3-MALE-GENITAL_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Cancer of other male genital organs male reproductive organ cancer 97
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000594/ScoringFiles/PGS000594.txt.gz
PGS002251
(PRS97_BMI)
 PGP000278 |
Dashti HS et al. BMC Med (2022)
 Body mass index (BMI) body mass index 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002251/ScoringFiles/PGS002251.txt.gz
PGS003400
(PRS97_obesity)
 PGP000416 |
Robinson JR et al. Obesity (Silver Spring) (2022)
 Obesity obesity disorder 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003400/ScoringFiles/PGS003400.txt.gz
PGS004917
(wGRS)
 PGP000648 |
Cui J et al. Arthritis Rheumatol (2020)
 Systemic lupus erythematosus systemic lupus erythematosus 97
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004917/ScoringFiles/PGS004917.txt.gz
PGS000195
(G-PROB_Raneg)
 PGP000081 |
Knevel R et al. Sci Transl Med (2020)
 Rheumatoid arthritis (CCP-negative) ACPA-negative rheumatoid arthritis 96
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000195/ScoringFiles/PGS000195.txt.gz
PGS001277
(GBE_HC203)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 PE +/- DVT deep vein thrombosis,
pulmonary embolism		 96
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001277/ScoringFiles/PGS001277.txt.gz
PGS001756
(GBE_INI25539)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA MD in tract superior thalamic radiation (R) neuroimaging measurement,
brain volume		 96
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001756/ScoringFiles/PGS001756.txt.gz
PGS000400
(PRSWEB_PHECODE172_C3-SKIN_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Skin cancer skin carcinoma 95
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000400/ScoringFiles/PGS000400.txt.gz
PGS000720
(PRS_Colorectal)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Colorectal cancer colorectal cancer 95
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000720/ScoringFiles/PGS000720.txt.gz
PGS000734
(PRS95_CRC)
 PGP000142 |
Archambault AN et al. Gastroenterology (2019)
 Colorectal cancer colorectal cancer 95
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000734/ScoringFiles/PGS000734.txt.gz
PGS000765
(PRS_CRC95)
 PGP000170 |
Huyghe JR et al. Nat Genet (2018)
 Colorectal cancer colorectal cancer 95
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000765/ScoringFiles/PGS000765.txt.gz
PGS000771
(GRS95_SLEmain)
 PGP000178 |
Chen L et al. Hum Mol Genet (2020)
 Systemic lupus erythematosus systemic lupus erythematosus 95
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000771/ScoringFiles/PGS000771.txt.gz
PGS000772
(GRS95_SLEgen)
 PGP000178 |
Chen L et al. Hum Mol Genet (2020)
 Systemic lupus erythematosus systemic lupus erythematosus 95
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000772/ScoringFiles/PGS000772.txt.gz
PGS001885
(portability-PLR_960.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Allergy/adverse effect of penicillin drug allergy 95
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001885/ScoringFiles/PGS001885.txt.gz
PGS001279
(GBE_BIN_FC8006152)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 previously: Blood clot in the lung deep vein thrombosis,
pulmonary embolism		 94
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001279/ScoringFiles/PGS001279.txt.gz
PGS004900
(GRS_BMI_males)
 PGP000630 |
Wu Y et al. PLoS Genet (2020)
 Body mass index (BMI) body mass index 94
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004900/ScoringFiles/PGS004900.txt.gz
PGS004901
(GRS_BMI_females)
 PGP000630 |
Wu Y et al. PLoS Genet (2020)
 Body mass index (BMI) body mass index 94
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004901/ScoringFiles/PGS004901.txt.gz
PGS012548
(PRS94_AD)
 PGP000791 |
Li Y et al. J Gerontol A Biol Sci Med Sci (2024)
 Alzheimer's disease Alzheimer disease 94
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012548/ScoringFiles/PGS012548.txt.gz
PGS000861
(UACR)
 PGP000211 |
Aly DM et al. Nat Genet (2021)
 Urine Albumin-to-Creatinine ratio urinary albumin to creatinine ratio 93
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000861/ScoringFiles/PGS000861.txt.gz
PGS001293
(GBE_HC1123)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other diseases of liver (time-to-event) liver disorder 92
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001293/ScoringFiles/PGS001293.txt.gz
PGS003347
(ALLGRS_HDL)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 HDL cholesterol high density lipoprotein cholesterol measurement 92
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003347/ScoringFiles/PGS003347.txt.gz
PGS003341
(CVGRS_TC)
 PGP000405 |
Kim YJ et al. Nat Commun (2022)
 Total cholesterol total cholesterol measurement 91
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003341/ScoringFiles/PGS003341.txt.gz
PGS004118
(pt_clump.auto.GCST90013534.RA)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Rheumatoid arthritis rheumatoid arthritis 91
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004118/ScoringFiles/PGS004118.txt.gz
PGS004323
(PRS91_T2D)
 PGP000557 |
Tan Q et al. J Hazard Mater (2023)
 Type 2 diabetes type 2 diabetes mellitus 91
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004323/ScoringFiles/PGS004323.txt.gz
PGS000038
(PRS90)
 PGP000026 |
Rutten-Jacobs LC et al. BMJ (2018)
 Stroke stroke disorder 90
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000038/ScoringFiles/PGS000038.txt.gz
PGS000902
(PRS90_PD)
 PGP000235 |
Nalls MA et al. Lancet Neurol (2019)
 Parkinson's disease Parkinson disease 90
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000902/ScoringFiles/PGS000902.txt.gz
PGS001516
(GBE_HC1112)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Other diseases of intestine (time-to-event) intestinal disorder 90
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001516/ScoringFiles/PGS001516.txt.gz
PGS003392
(best_LUSC)
 PGP000413 |
Namba S et al. Cancer Res (2022)
 Lung squamous cell carcinoma squamous cell lung carcinoma 90
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003392/ScoringFiles/PGS003392.txt.gz
PGS004283
(GenoBoost_all-cause_dementia_3)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 All-cause dementia dementia 90
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004283/ScoringFiles/PGS004283.txt.gz
PGS004297
(GenoBoost_breast_cancer_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Breast cancer breast carcinoma 90
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004297/ScoringFiles/PGS004297.txt.gz
PGS004924
(PRS90_PD)
 PGP000657 |
Cao Z et al. Parkinsonism Relat Disord (2023)
 Parkinson's disease Parkinson disease 90
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004924/ScoringFiles/PGS004924.txt.gz
PGS002267
(PRS89_AA)
 PGP000296 |
Pirruccello JP et al. Nat Genet (2021)
 Ascending thoracic aortic diameter cardiovascular disease biomarker measurement,
aortic measurement		 89
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002267/ScoringFiles/PGS002267.txt.gz
PGS004240
(PRS89_CRC)
 PGP000541 |
Fan L et al. Int J Cancer (2023)
 Colorectal cancer colorectal carcinoma 89
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004240/ScoringFiles/PGS004240.txt.gz
PGS005104
(PRSAFR)
 PGP000694 |
Jia G et al. Nat Genet (2024)
 Breast cancer breast carcinoma 89
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005104/ScoringFiles/PGS005104.txt.gz
PGS000045
(BCPRS_Overall)
 PGP000033 |
Kuchenbaecker KB et al. J Natl Cancer Inst (2017)
 Breast cancer breast carcinoma 88
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000045/ScoringFiles/PGS000045.txt.gz
PGS001280
(GBE_HC943)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 PE (time-to-event) pulmonary embolism 88
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001280/ScoringFiles/PGS001280.txt.gz
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