Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000705
(HC188)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gallstones gallstones 183,458
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000705/ScoringFiles/PGS000705.txt.gz - Check Terms/Licenses
PGS001256
(GBE_HC188)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Gallstones gallstones 876
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001256/ScoringFiles/PGS001256.txt.gz
PGS000242
(Gal-3)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Galectin-3 (Gal-3) serum levels blood protein amount 552,282
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000242/ScoringFiles/PGS000242.txt.gz
PGS000241
(GAL)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Galanin peptides (GAL) serum levels blood protein amount 553,548
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000241/ScoringFiles/PGS000241.txt.gz
PGS004453
(disease.G56.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 G56 (Mononeuropathies of upper limb) mononeuropathy 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004453/ScoringFiles/PGS004453.txt.gz
PGS004523
(meta.G56.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 G56 (Mononeuropathies of upper limb) mononeuropathy 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004523/ScoringFiles/PGS004523.txt.gz
PGS004452
(disease.G47.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 G47 (Sleep disorders) sleep disorder 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004452/ScoringFiles/PGS004452.txt.gz
PGS004522
(meta.G47.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 G47 (Sleep disorders) sleep disorder 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004522/ScoringFiles/PGS004522.txt.gz
PGS001858
(portability-PLR_564)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Functional digestive disorders digestive system disorder 764
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001858/ScoringFiles/PGS001858.txt.gz
PGS002069
(portability-ldpred2_564)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Functional digestive disorders digestive system disorder 747,820
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002069/ScoringFiles/PGS002069.txt.gz
PGS001398
(GBE_QT_FC1004570)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Friendship satisfaction friendship satisfaction measurement 659
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001398/ScoringFiles/PGS001398.txt.gz
PGS005229
(FFS_Frailty)
 PGP000735 |
Foote IF et al. Nat Genet (2025)
 Fried Frailty Score frailty measurement 2,761,868
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005229/ScoringFiles/PGS005229.txt.gz
PGS001062
(GBE_INI1309)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Fresh fruit intake diet measurement 4,257
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001062/ScoringFiles/PGS001062.txt.gz
PGS001397
(GBE_INI971)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Frequency of walking for pleasure in last 4 weeks physical activity measurement 1,276
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001397/ScoringFiles/PGS001397.txt.gz
PGS019517
(TPMI_599.5_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Frequency of urination and polyuria Polyuria 206,142
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019517/ScoringFiles/PGS019517.txt.gz
PGS019518
(TPMI_599.5_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Frequency of urination and polyuria Polyuria 939,875
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019518/ScoringFiles/PGS019518.txt.gz
PGS019519
(TPMI_599.5_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Frequency of urination and polyuria Polyuria 544,657
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019519/ScoringFiles/PGS019519.txt.gz
PGS019520
(TPMI_599.5_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Frequency of urination and polyuria Polyuria 983,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019520/ScoringFiles/PGS019520.txt.gz
PGS019521
(TPMI_599.5_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Frequency of urination and polyuria Polyuria 980,241
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019521/ScoringFiles/PGS019521.txt.gz
PGS001396
(GBE_QT_FC1002060)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Frequency of unenthusiasm / disinterest in last 2 weeks emotional symptom measurement 2,431
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001396/ScoringFiles/PGS001396.txt.gz
PGS000984
(GBE_INI2237)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Frequency of playing computer games lifestyle measurement 5,774
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000984/ScoringFiles/PGS000984.txt.gz
PGS001395
(GBE_INI21025)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Frequency of discomfort/pain in abdomen in last 3 months Abdominal pain 256
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001395/ScoringFiles/PGS001395.txt.gz
PGS001080
(GBE_QT_FC1002080)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Freq. of tiredness / lethargy in last 2 weeks tiredness measurement 5,594
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001080/ScoringFiles/PGS001080.txt.gz
PGS001394
(GBE_INI20414)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Freq. of drinking alcohol alcohol consumption quality 860
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001394/ScoringFiles/PGS001394.txt.gz
PGS004907
(PRS31_FT4)
 PGP000639 |
Mulder TA et al. Eur J Endocrinol (2023)
 Free thyroxine concentration thyroxine level 31
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004907/ScoringFiles/PGS004907.txt.gz
PGS005228
(FI_Frailty)
 PGP000735 |
Foote IF et al. Nat Genet (2025)
 Frailty Index frailty measurement 2,379,429
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005228/ScoringFiles/PGS005228.txt.gz
PGS001921
(portability-PLR_fracture_5y)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Fractured/broken bones in last 5 years bone fracture 7,965
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001921/ScoringFiles/PGS001921.txt.gz
PGS002137
(portability-ldpred2_fracture_5y)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Fractured/broken bones in last 5 years bone fracture 738,021
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002137/ScoringFiles/PGS002137.txt.gz
PGS000229
(CX3CL1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Fractalkine (CX3CL1) serum levels blood protein amount 552,274
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000229/ScoringFiles/PGS000229.txt.gz
PGS001026
(GBE_HC83)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Forearm or wrist fracture upper extremity fracture 45
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001026/ScoringFiles/PGS001026.txt.gz
PGS001922
(portability-PLR_FVC)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Forced vital capacity (FVC), Best measure vital capacity 85,349
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001922/ScoringFiles/PGS001922.txt.gz
PGS002138
(portability-ldpred2_FVC)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Forced vital capacity (FVC), Best measure vital capacity 940,300
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002138/ScoringFiles/PGS002138.txt.gz
PGS004436
(X20151.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Forced vital capacity (FVC), Best measure vital capacity 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004436/ScoringFiles/PGS004436.txt.gz
PGS004432
(X3062.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Forced vital capacity (FVC) vital capacity 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004432/ScoringFiles/PGS004432.txt.gz
PGS002327
(lung_FVCzSMOKE.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002327/ScoringFiles/PGS002327.txt.gz
PGS002399
(lung_FVCzSMOKE.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 9,469
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002399/ScoringFiles/PGS002399.txt.gz
PGS002448
(lung_FVCzSMOKE.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 29,603
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002448/ScoringFiles/PGS002448.txt.gz
PGS002497
(lung_FVCzSMOKE.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 134,519
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002497/ScoringFiles/PGS002497.txt.gz
PGS002546
(lung_FVCzSMOKE.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 2,327
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002546/ScoringFiles/PGS002546.txt.gz
PGS002595
(lung_FVCzSMOKE.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 1,235
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002595/ScoringFiles/PGS002595.txt.gz
PGS002644
(lung_FVCzSMOKE.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 592,696
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002644/ScoringFiles/PGS002644.txt.gz
PGS002693
(lung_FVCzSMOKE.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Forced vital capacity vital capacity 986,815
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002693/ScoringFiles/PGS002693.txt.gz
PGS004438
(X20154.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Forced expiratory volume in 1-second (FEV1), predicted percentage forced expiratory volume 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004438/ScoringFiles/PGS004438.txt.gz
PGS004437
(X20153.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Forced expiratory volume in 1-second (FEV1), predicted forced expiratory volume 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004437/ScoringFiles/PGS004437.txt.gz
PGS001918
(portability-PLR_FEV1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Forced expiratory volume in 1-second (FEV1), Best measure forced expiratory volume 79,136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001918/ScoringFiles/PGS001918.txt.gz
PGS002134
(portability-ldpred2_FEV1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Forced expiratory volume in 1-second (FEV1), Best measure forced expiratory volume 940,003
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002134/ScoringFiles/PGS002134.txt.gz
PGS004435
(X20150.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Forced expiratory volume in 1-second (FEV1), Best measure forced expiratory volume 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004435/ScoringFiles/PGS004435.txt.gz
PGS004433
(X3063.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Forced expiratory volume in 1-second (FEV1) forced expiratory volume 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004433/ScoringFiles/PGS004433.txt.gz
PGS001800
(PRS_FEV1)
 PGP000264 |
Moll M et al. Lancet Respir Med (2020)
 Forced expiratory volume (FEV1) forced expiratory volume 1,713,430
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001800/ScoringFiles/PGS001800.txt.gz
PGS000240
(FS)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Follistatin (FS) serum levels blood protein amount 552,138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000240/ScoringFiles/PGS000240.txt.gz
Showing 4551 to 4600 of 6982 rows