Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003738
(PRS136_BC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Breast cancer breast carcinoma 136
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003738/ScoringFiles/PGS003738.txt.gz
PGS003758
(BrCa_PRS_JPHC_JPGWAS)
 PGP000478 |
Ohbe H et al. Breast Cancer Res Treat (2022)
 Breast cancer breast carcinoma 46,861
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003758/ScoringFiles/PGS003758.txt.gz
PGS003759
(BrCa_PRS_JPHC_EURGWAS)
 PGP000478 |
Ohbe H et al. Breast Cancer Res Treat (2022)
 Breast cancer breast carcinoma 17,252
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003759/ScoringFiles/PGS003759.txt.gz
PGS003983
(dbslmm.auto.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 1,137,459
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003983/ScoringFiles/PGS003983.txt.gz
PGS003999
(lassosum.auto.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 13,086
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003999/ScoringFiles/PGS003999.txt.gz
PGS004025
(ldpred2.auto.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 1,041,298
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004025/ScoringFiles/PGS004025.txt.gz
PGS004040
(ldpred2.CV.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 1,041,298
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004040/ScoringFiles/PGS004040.txt.gz
PGS004053
(megaprs.auto.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 869,407
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004053/ScoringFiles/PGS004053.txt.gz
PGS004069
(megaprs.CV.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 869,407
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004069/ScoringFiles/PGS004069.txt.gz
PGS004083
(prscs.auto.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 1,103,877
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004083/ScoringFiles/PGS004083.txt.gz
PGS004107
(pt_clump.auto.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 209
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004107/ScoringFiles/PGS004107.txt.gz
PGS004123
(pt_clump_nested.CV.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 982
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004123/ScoringFiles/PGS004123.txt.gz
PGS004137
(sbayesr.auto.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 950,524
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004137/ScoringFiles/PGS004137.txt.gz
PGS004153
(UKBB_EnsPGS.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 1,133,268
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004153/ScoringFiles/PGS004153.txt.gz
PGS004166
(bc_1)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Breast cancer breast carcinoma 3,920
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004166/ScoringFiles/PGS004166.txt.gz
PGS004167
(bc_2)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Breast cancer breast carcinoma 717
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004167/ScoringFiles/PGS004167.txt.gz
PGS004168
(bc_3)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Breast cancer breast carcinoma 4,618
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004168/ScoringFiles/PGS004168.txt.gz
PGS004169
(bc_4)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Breast cancer breast carcinoma 1,361
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004169/ScoringFiles/PGS004169.txt.gz
PGS004170
(bc_5)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Breast cancer breast carcinoma 2,278
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004170/ScoringFiles/PGS004170.txt.gz
PGS004242
(PRS306_breast)
 PGP000542 |
Kim ES et al. NPJ Precis Oncol (2023)
 Breast cancer breast carcinoma 306
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004242/ScoringFiles/PGS004242.txt.gz
PGS004295
(GenoBoost_breast_cancer_0)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Breast cancer breast carcinoma 140
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004295/ScoringFiles/PGS004295.txt.gz
PGS004296
(GenoBoost_breast_cancer_1)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Breast cancer breast carcinoma 80
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004296/ScoringFiles/PGS004296.txt.gz
PGS004297
(GenoBoost_breast_cancer_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Breast cancer breast carcinoma 90
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004297/ScoringFiles/PGS004297.txt.gz
PGS004298
(GenoBoost_breast_cancer_3)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Breast cancer breast carcinoma 900
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004298/ScoringFiles/PGS004298.txt.gz
PGS004299
(GenoBoost_breast_cancer_4)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Breast cancer breast carcinoma 70
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004299/ScoringFiles/PGS004299.txt.gz
PGS004441
(disease.breast_cancer.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Breast cancer breast carcinoma 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004441/ScoringFiles/PGS004441.txt.gz
PGS004511
(meta.breast_cancer.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Breast cancer breast carcinoma 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004511/ScoringFiles/PGS004511.txt.gz
PGS004579
(BRCA_PRSCS)
 PGP000562 |
Youssef O et al. Lab Invest (2024)
 Breast cancer breast carcinoma 1,088,163
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004579/ScoringFiles/PGS004579.txt.gz
PGS004611
(RORP_PRS)
 PGP000590 |
Shieh Y et al. NPJ Precis Oncol (2023)
 Breast cancer breast carcinoma 76
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004611/ScoringFiles/PGS004611.txt.gz
PGS004688
(breast_cancer)
 PGP000596 |
Hu J et al. JNCI Cancer Spectr (2024)
 Breast cancer breast carcinoma 1,044,110
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004688/ScoringFiles/PGS004688.txt.gz
PGS004737
(breast_cancer_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Breast cancer breast carcinoma 3,666,245
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004737/ScoringFiles/PGS004737.txt.gz
PGS004738
(breast_cancer_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Breast cancer breast carcinoma 3,666,321
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004738/ScoringFiles/PGS004738.txt.gz
PGS004865
(PRS105_BC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 Breast cancer breast carcinoma 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004865/ScoringFiles/PGS004865.txt.gz
PGS004869
(INTERVENE_MegaPRS_breast_cancer)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Breast cancer breast carcinoma 872,060
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004869/ScoringFiles/PGS004869.txt.gz
PGS004893
(overall.hybrid.prs)
 PGP000621 |
Gao G et al. Hum Mol Genet (2022)
 Breast cancer breast carcinoma 56,943
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004893/ScoringFiles/PGS004893.txt.gz
PGS005104
(PRSAFR)
 PGP000694 |
Jia G et al. Nat Genet (2024)
 Breast cancer breast carcinoma 89
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005104/ScoringFiles/PGS005104.txt.gz
PGS005164
(PRS-BC)
 PGP000711 |
Zhu M et al. PLoS Med (2025)
 Breast cancer breast carcinoma 109
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005164/ScoringFiles/PGS005164.txt.gz
PGS005378
(Overall_Prop_M1)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Breast cancer breast carcinoma 2,321,840
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005378/ScoringFiles/PGS005378.txt.gz
PGS005379
(Overall_Prop_M2)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Breast cancer breast carcinoma 175,173
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005379/ScoringFiles/PGS005379.txt.gz
PGS000978
(GBE_INI1438)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Bread intake carbohydrate intake measurement 3,483
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000978/ScoringFiles/PGS000978.txt.gz
PGS000620
(PRSWEB_PHECODE191.11_C71_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain cancer brain cancer 522
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000620/ScoringFiles/PGS000620.txt.gz
PGS000621
(PRSWEB_PHECODE191.11_GWAS-Catalog-r2019-05-03-X191.11_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain cancer brain cancer 12
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000621/ScoringFiles/PGS000621.txt.gz
PGS000622
(PRSWEB_PHECODE191.11_GWAS-Catalog-r2019-05-03-X191.11_P_5e-08_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain cancer brain cancer 12
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000622/ScoringFiles/PGS000622.txt.gz
PGS000623
(PRSWEB_PHECODE191.11_GWAS-Catalog-r2019-05-03-X191.11_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain cancer brain cancer 11
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000623/ScoringFiles/PGS000623.txt.gz
PGS000624
(PRSWEB_PHECODE191.11_GWAS-Catalog-r2019-05-03-X191.11_PT_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain cancer brain cancer 5
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000624/ScoringFiles/PGS000624.txt.gz
PGS000625
(PRSWEB_PHECODE191.11_UKBB-SAIGE-HRC-X191.11_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain cancer brain cancer 11
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000625/ScoringFiles/PGS000625.txt.gz
PGS001808
(portability-PLR_191.11)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Brain cancer brain cancer 117
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001808/ScoringFiles/PGS001808.txt.gz
PGS003737
(PRS26_BrC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Brain cancer brain neoplasm 26
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003737/ScoringFiles/PGS003737.txt.gz
PGS000618
(PRSWEB_PHECODE191.1_GWAS-Catalog-r2019-05-03-X191.1_P_5e-08_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain and nervous system cancer central nervous system cancer 23
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000618/ScoringFiles/PGS000618.txt.gz
PGS000619
(PRSWEB_PHECODE191.1_GWAS-Catalog-r2019-05-03-X191.1_PT_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Brain and nervous system cancer central nervous system cancer 19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000619/ScoringFiles/PGS000619.txt.gz
Showing 4601 to 4650 of 5332 rows