Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002936
(ExPRSweb_Glucose_30740-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Glucose glucose measurement 4,405
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002936/ScoringFiles/PGS002936.txt.gz
PGS003701
(R_presubiculum_head_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right presubiculum head volume presubiculum volume 4,398
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003701/ScoringFiles/PGS003701.txt.gz
PGS001803
(portability-PLR_172)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Skin cancer skin carcinoma 4,371
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001803/ScoringFiles/PGS001803.txt.gz
PGS001903
(portability-PLR_ECG_PP_interval)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 PP interval PP interval 4,368
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001903/ScoringFiles/PGS001903.txt.gz
PGS002395
(disease_ALLERGY_ECZEMA_DIAGNOSED.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Eczema Eczematoid dermatitis 4,367
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002395/ScoringFiles/PGS002395.txt.gz
PGS003204
(ExPRSweb_SleepApnea_finngen-R4-G6-SLEEPAPNO_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Sleep apnea sleep apnea syndrome 4,360
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003204/ScoringFiles/PGS003204.txt.gz
PGS001128
(GBE_BIN_FC20020116)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Previous smoker smoking status measurement 4,348
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001128/ScoringFiles/PGS001128.txt.gz
PGS001049
(GBE_BIN2040)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Risk taking behaviour risk-taking behaviour 4,299
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001049/ScoringFiles/PGS001049.txt.gz
PGS002532
(body_BMIz.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Body mass index (BMI) body mass index 4,284
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002532/ScoringFiles/PGS002532.txt.gz
PGS003130
(ExPRSweb_Thinness_STILTS-UKHLS_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Thinness body mass index 4,280
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003130/ScoringFiles/PGS003130.txt.gz
PGS000763
(PRS_HAID)
 PGP000165 |
Cherny SS et al. Eur J Hum Genet (2020)
 Hearing aid use presbycusis 4,270
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000763/ScoringFiles/PGS000763.txt.gz
PGS001062
(GBE_INI1309)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Fresh fruit intake diet measurement 4,257
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001062/ScoringFiles/PGS001062.txt.gz
PGS001199
(GBE_INI30120)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Lymphocyte count lymphocyte count 4,212
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001199/ScoringFiles/PGS001199.txt.gz
PGS000926
(GBE_QT_FC1001220)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Daytime dozing / sleeping (narcolepsy) narcolepsy 4,194
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000926/ScoringFiles/PGS000926.txt.gz
PGS003940
(INI30160)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Basophil count basophil count 4,184
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003940/ScoringFiles/PGS003940.txt.gz
PGS002545
(lung_FEV1FVCzSMOKE.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 FEV1/FVC ratio FEV/FVC ratio 4,165
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002545/ScoringFiles/PGS002545.txt.gz
PGS001246
(GBE_BIN_FC10001727)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Ease of skin tanning (get very tanned) suntan 4,130
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001246/ScoringFiles/PGS001246.txt.gz
PGS000318
(cPRS_F)
 PGP000095 |
Meisner A et al. Am J Hum Genet (2020)
 All-cause mortality (female) age at death,
female		 4,122
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000318/ScoringFiles/PGS000318.txt.gz
PGS001523
(GBE_INI4194)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Pulse rate heart rate 4,117
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001523/ScoringFiles/PGS001523.txt.gz
PGS001150
(GBE_INI1160)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Sleep duration sleep duration trait 4,106
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001150/ScoringFiles/PGS001150.txt.gz
PGS000319
(cPRS_M)
 PGP000095 |
Meisner A et al. Am J Hum Genet (2020)
 All-cause mortality (male) age at death,
male		 4,092
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000319/ScoringFiles/PGS000319.txt.gz
PGS003595
(L_GC-ML-DG_head_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left granule cell and molecular layer of the dentate gyrus head volume dentate gyrus volume 4,079
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003595/ScoringFiles/PGS003595.txt.gz
PGS001327
(GBE_HC221)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Diabetes diabetes mellitus 4,053
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001327/ScoringFiles/PGS001327.txt.gz
PGS019593
(TPMI_695.4_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Lupus localized and systemic systemic lupus erythematosus 4,048
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019593/ScoringFiles/PGS019593.txt.gz
PGS000483
(PRSWEB_PHECODE174.1_C50_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Breast cancer (female) breast carcinoma 4,047
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000483/ScoringFiles/PGS000483.txt.gz
PGS004009
(lassosum.auto.GCST90013445.T1D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 4,031
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004009/ScoringFiles/PGS004009.txt.gz
PGS002618
(pigment_TANNING.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Tanning suntan 4,026
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002618/ScoringFiles/PGS002618.txt.gz
PGS001094
(GBE_BIN_FC7001747)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Hair color, brown strand of hair color 4,024
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001094/ScoringFiles/PGS001094.txt.gz
PGS018525
(TPMI_174_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Breast cancer breast cancer 4,021
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018525/ScoringFiles/PGS018525.txt.gz
PGS004276
(GenoBoost_asthma_1)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Asthma asthma 4,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004276/ScoringFiles/PGS004276.txt.gz
PGS004277
(GenoBoost_asthma_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Asthma asthma 4,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004277/ScoringFiles/PGS004277.txt.gz
PGS004278
(GenoBoost_asthma_3)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Asthma asthma 4,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004278/ScoringFiles/PGS004278.txt.gz
PGS004306
(GenoBoost_coronary_artery_disease_1)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Coronary artery disease coronary artery disorder 4,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004306/ScoringFiles/PGS004306.txt.gz
PGS004307
(GenoBoost_coronary_artery_disease_2)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Coronary artery disease coronary artery disorder 4,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004307/ScoringFiles/PGS004307.txt.gz
PGS004311
(GenoBoost_type_2_diabetes_1)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 4,000
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004311/ScoringFiles/PGS004311.txt.gz
PGS001988
(portability-PLR_M_log_testosterone)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Testosterone (male only) testosterone measurement,
male		 3,985
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001988/ScoringFiles/PGS001988.txt.gz
PGS001841
(portability-PLR_427.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Atrial fibrillation and flutter atrial fibrillation,
atrial flutter		 3,980
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001841/ScoringFiles/PGS001841.txt.gz
PGS002004
(portability-PLR_sensitive_stomach)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Sensitive stomach health trait 3,970
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002004/ScoringFiles/PGS002004.txt.gz
PGS004179
(asthma_4)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Asthma asthma 3,963
-
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004179/ScoringFiles/PGS004179.txt.gz
PGS002426
(disease_T2D.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 3,947
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002426/ScoringFiles/PGS002426.txt.gz
PGS001383
(GBE_INI5257)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Corneal resistance factor (R) corneal resistance factor 3,941
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001383/ScoringFiles/PGS001383.txt.gz
PGS019599
(TPMI_695.42_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Systemic lupus erythematosus systemic lupus erythematosus 3,935
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019599/ScoringFiles/PGS019599.txt.gz
PGS000993
(GBE_QT_FC1001329)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Oily fish consumption fish consumption measurement 3,925
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000993/ScoringFiles/PGS000993.txt.gz
PGS004166
(bc_1)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Breast cancer breast carcinoma 3,920
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004166/ScoringFiles/PGS004166.txt.gz
PGS002572
(biochemistry_Triglycerides.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Triglycerides triglyceride measurement 3,917
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002572/ScoringFiles/PGS002572.txt.gz
PGS003598
(R_GC-ML-DG_body_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right granule cell and molecular layer of the dentate gyrus body volume dentate gyrus volume 3,904
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003598/ScoringFiles/PGS003598.txt.gz
PGS002383
(disease_ASTHMA_DIAGNOSED.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Asthma asthma 3,893
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002383/ScoringFiles/PGS002383.txt.gz
PGS004196
(cad_1)
 PGP000520 |
Raben TG et al. Sci Rep (2023)
 Coronary artery disease coronary artery disorder 3,892
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004196/ScoringFiles/PGS004196.txt.gz
PGS002420
(cov_SMOKING_STATUS.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Smoking status smoking status measurement 3,874
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002420/ScoringFiles/PGS002420.txt.gz
PGS001074
(GBE_BIN_FC30006164)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Types of physical activity in last 4 weeks (other exercises) physical activity measurement 3,846
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001074/ScoringFiles/PGS001074.txt.gz
Showing 4701 to 4750 of 6972 rows