Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004844
(tc_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total cholesterol total cholesterol measurement 6,149,012
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004844/ScoringFiles/PGS004844.txt.gz
PGS004836
(stroke_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Stroke stroke 5,644,266
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004836/ScoringFiles/PGS004836.txt.gz
PGS004776
(hdl_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 HDL cholesterol high density lipoprotein cholesterol measurement 6,463,324
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004776/ScoringFiles/PGS004776.txt.gz
PGS004774
(hct_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Hematocrit hematocrit 1,259,662
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004774/ScoringFiles/PGS004774.txt.gz
PGS004850
(Total_protein_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total protein measurement total blood protein measurement 937,777
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004850/ScoringFiles/PGS004850.txt.gz
PGS004834
(skin_cancer_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Skin cancer melanoma 1,271,902
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004834/ScoringFiles/PGS004834.txt.gz
PGS004852
(TotalProtein_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total protein measurement total blood protein measurement 724,061
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004852/ScoringFiles/PGS004852.txt.gz
PGS004807
(Neutrophils_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Neutrophil count neutrophil count 3,498,605
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004807/ScoringFiles/PGS004807.txt.gz
PGS004855
(WBC_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 White blood cell count leukocyte quantity 1,165,158
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004855/ScoringFiles/PGS004855.txt.gz
PGS004749
(creatinine_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Serum creatinine serum creatinine amount 1,469,062
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004749/ScoringFiles/PGS004749.txt.gz
PGS004715
(ALT_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alanine aminotransferase serum alanine aminotransferase amount 559,731
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004715/ScoringFiles/PGS004715.txt.gz
PGS004791
(ldl_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,098,797
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004791/ScoringFiles/PGS004791.txt.gz
PGS004727
(Basophils_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Basophil count basophil count 6,503
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004727/ScoringFiles/PGS004727.txt.gz
PGS004858
(WBC_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 White blood cell count leukocyte quantity 6,594,323
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004858/ScoringFiles/PGS004858.txt.gz
PGS004701
(a1c_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 HbA1c HbA1c measurement 1,107,927
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004701/ScoringFiles/PGS004701.txt.gz
PGS004856
(WBC_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 White blood cell count leukocyte quantity 6,594,323
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004856/ScoringFiles/PGS004856.txt.gz
PGS004723
(asthma_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 985,316
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004723/ScoringFiles/PGS004723.txt.gz
PGS004707
(Albumin_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Albumin serum albumin amount 589,303
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004707/ScoringFiles/PGS004707.txt.gz
PGS004816
(prostate_cancer_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Prostate cancer prostate carcinoma 922,104
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004816/ScoringFiles/PGS004816.txt.gz
PGS004752
(current_smoker_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Current smoker smoking status measurement 4,496,606
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004752/ScoringFiles/PGS004752.txt.gz
PGS004734
(bmi_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Body mass index (BMI) body mass index 4,081,121
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004734/ScoringFiles/PGS004734.txt.gz
PGS004782
(height_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Height body height 1,612,712
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004782/ScoringFiles/PGS004782.txt.gz
PGS004814
(Platelets_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Platelet count platelet count 6,146,883
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004814/ScoringFiles/PGS004814.txt.gz
PGS004740
(BUN_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Urea urea measurement 1,499,858
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004740/ScoringFiles/PGS004740.txt.gz
PGS004738
(breast_cancer_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Breast cancer breast carcinoma 3,666,321
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004738/ScoringFiles/PGS004738.txt.gz
PGS004708
(Albumin_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Albumin serum albumin amount 2,071,924
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004708/ScoringFiles/PGS004708.txt.gz
PGS004729
(Basophils_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Basophil count basophil count 1,538,675
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004729/ScoringFiles/PGS004729.txt.gz
PGS004833
(skin_cancer_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Skin cancer melanoma 807,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004833/ScoringFiles/PGS004833.txt.gz
PGS004799
(migraine_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Migraine migraine disorder 4,319,950
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004799/ScoringFiles/PGS004799.txt.gz
PGS004765
(glaucoma_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Glaucoma glaucoma 835,476
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004765/ScoringFiles/PGS004765.txt.gz
PGS004842
(tc_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total cholesterol total cholesterol measurement 6,439,132
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004842/ScoringFiles/PGS004842.txt.gz
PGS004786
(HTN_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Hypertension hypertension 6,622,611
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004786/ScoringFiles/PGS004786.txt.gz
PGS004769
(Hb_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Hemoglobin hemoglobin measurement 584,676
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004769/ScoringFiles/PGS004769.txt.gz
PGS004824
(RBC_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Red blood cell count erythrocyte count 1,542,933
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004824/ScoringFiles/PGS004824.txt.gz
PGS004805
(Neutrophils_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Neutrophil count neutrophil count 595,488
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004805/ScoringFiles/PGS004805.txt.gz
PGS004859
(T2D_PRS_CS)
 PGP000605 |
Deutsch AJ et al. Diabetes Care (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,108,235
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004859/ScoringFiles/PGS004859.txt.gz
PGS004860
(Genome-wide-PRS)
 PGP000607 |
Boumtje V et al. EBioMedicine (2024)
 Lung cancer lung carcinoma 1,143,554
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004860/ScoringFiles/PGS004860.txt.gz
PGS004861
(hermes.gwama)
 PGP000608 |
Zheng SL et al. Nat Genet (2024)
 Dilated cardiomyopathy dilated cardiomyopathy 713,932
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004861/ScoringFiles/PGS004861.txt.gz
PGS004862
(hermes.mtag)
 PGP000608 |
Zheng SL et al. Nat Genet (2024)
 Dilated cardiomyopathy (MTAG) dilated cardiomyopathy 709,534
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004862/ScoringFiles/PGS004862.txt.gz
PGS004863
(PRS74_AD)
 PGP000609 |
Sleiman PM et al. Alzheimers Dement (2023)
 Alzheimer's disease Alzheimer disease 74
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004863/ScoringFiles/PGS004863.txt.gz
PGS004864
(PRS186_BMI)
 PGP000611 |
de Toro-Martín J et al. JCI Insight (2018)
 Body mass index (BMI) body mass index 186
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004864/ScoringFiles/PGS004864.txt.gz
PGS004865
(PRS105_BC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 Breast cancer breast carcinoma 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004865/ScoringFiles/PGS004865.txt.gz
PGS004866
(PRS105_ERposBC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 ER-positive breast cancer estrogen-receptor positive breast cancer 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004866/ScoringFiles/PGS004866.txt.gz
PGS004867
(PRS105_ERnegBC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 ER-negative breast cancer estrogen-receptor negative breast cancer 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004867/ScoringFiles/PGS004867.txt.gz
PGS004868
(T2DPGS)
 PGP000617 |
Yun JS et al. Cardiovasc Diabetol (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 6,580,804
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004868/ScoringFiles/PGS004868.txt.gz
PGS004879
(INTERVENE_MegaPRS_CHD)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Coronary heart disease coronary artery disease 610,677
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004879/ScoringFiles/PGS004879.txt.gz
PGS004875
(INTERVENE_MegaPRS_AllCancers)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 All Cancers cancer 818,872
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004875/ScoringFiles/PGS004875.txt.gz
PGS004874
(INTERVENE_MegaPRS_T1D)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 56,916
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004874/ScoringFiles/PGS004874.txt.gz
PGS004871
(INTERVENE_MegaPRS_Gout)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Gout gout 762,621
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004871/ScoringFiles/PGS004871.txt.gz
PGS004883
(INTERVENE_MegaPRS_Knee_osteoarthritis)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Knee osteoarthritis osteoarthritis, knee 952,133
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004883/ScoringFiles/PGS004883.txt.gz
Showing 4751 to 4800 of 5221 rows