Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004352
(X30080.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Platelet count platelet count 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004352/ScoringFiles/PGS004352.txt.gz
PGS004811
(Platelets_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Platelet count platelet count 1,147,733
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004811/ScoringFiles/PGS004811.txt.gz
PGS004812
(Platelets_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Platelet count platelet count 6,146,883
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004812/ScoringFiles/PGS004812.txt.gz
PGS004813
(Platelets_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Platelet count platelet count 1,793,041
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004813/ScoringFiles/PGS004813.txt.gz
PGS004814
(Platelets_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Platelet count platelet count 6,146,883
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004814/ScoringFiles/PGS004814.txt.gz
PGS019803
(TPMI_PLT_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Platelet count platelet count 34,256
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019803/ScoringFiles/PGS019803.txt.gz
PGS019827
(TPMI_PLT_LDPred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Platelet count platelet count 939,791
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019827/ScoringFiles/PGS019827.txt.gz
PGS019851
(TPMI_PLT_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Platelet count platelet count 983,740
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019851/ScoringFiles/PGS019851.txt.gz
PGS019875
(TPMI_PLT_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Platelet count platelet count 435,726
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019875/ScoringFiles/PGS019875.txt.gz
PGS019899
(TPMI_PLT_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Platelet count platelet count 346,424
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019899/ScoringFiles/PGS019899.txt.gz
PGS004582
(PRSice_T1)
 PGP000563 |
Yang Z et al. Blood (2023)
 Platelet count during the first trimester platelet count 407,667
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004582/ScoringFiles/PGS004582.txt.gz
PGS004583
(PRSice_T2)
 PGP000563 |
Yang Z et al. Blood (2023)
 Platelet count during the second trimester platelet count 104,759
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004583/ScoringFiles/PGS004583.txt.gz
PGS004584
(PRSice_T3)
 PGP000563 |
Yang Z et al. Blood (2023)
 Platelet count during the third trimester platelet count 5,597
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004584/ScoringFiles/PGS004584.txt.gz
PGS005193
(VPGS_PLT)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Platelet count variance platelet count 9,451,248
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005193/ScoringFiles/PGS005193.txt.gz
PGS000107
(pct)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Platelet crit platelet crit 30,459
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000107/ScoringFiles/PGS000107.txt.gz
PGS000184
(pct)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Platelet crit platelet crit 700
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000184/ScoringFiles/PGS000184.txt.gz
PGS001517
(GBE_INI30090)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Platelet crit platelet crit 20,910
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001517/ScoringFiles/PGS001517.txt.gz
PGS001970
(portability-PLR_log_platelet_crit)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Platelet crit platelet crit 56,402
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001970/ScoringFiles/PGS001970.txt.gz
PGS002188
(portability-ldpred2_log_platelet_crit)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Platelet crit platelet crit 703,576
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002188/ScoringFiles/PGS002188.txt.gz
PGS003547
(cont-decay-log_platelet_crit)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Platelet crit platelet crit 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003547/ScoringFiles/PGS003547.txt.gz
PGS003933
(INI30090)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Platelet crit platelet crit 27,034
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003933/ScoringFiles/PGS003933.txt.gz
PGS004353
(X30090.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Platelet crit platelet crit 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004353/ScoringFiles/PGS004353.txt.gz
PGS005173
(VPGS_PCT)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Plateletcrit variance platelet crit 9,451,377
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005173/ScoringFiles/PGS005173.txt.gz
PGS000274
(PDGF_subunit_B)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Platelet-derived growth factor subunit B (PDGF_subunit_B) serum levels blood protein amount 552,265
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000274/ScoringFiles/PGS000274.txt.gz
PGS000108
(pdw)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Platelet distribution width platelet component distribution width 25,995
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000108/ScoringFiles/PGS000108.txt.gz
PGS000185
(pdw)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Platelet distribution width platelet component distribution width 555
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000185/ScoringFiles/PGS000185.txt.gz
PGS001079
(GBE_INI30110)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Platelet distribution width platelet component distribution width 18,814
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001079/ScoringFiles/PGS001079.txt.gz
PGS001972
(portability-PLR_log_platelet_width)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Platelet distribution width platelet component distribution width 46,157
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001972/ScoringFiles/PGS001972.txt.gz
PGS002190
(portability-ldpred2_log_platelet_width)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Platelet distribution width platelet component distribution width 482,649
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002190/ScoringFiles/PGS002190.txt.gz
PGS003549
(cont-decay-log_platelet_width)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Platelet distribution width platelet component distribution width 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003549/ScoringFiles/PGS003549.txt.gz
PGS003935
(INI30110)
 PGP000502 |
Tanigawa Y et al. AJHG (2023)
 Platelet distribution width platelet component distribution width 21,899
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003935/ScoringFiles/PGS003935.txt.gz
PGS004355
(X30110.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Platelet distribution width platelet component distribution width 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004355/ScoringFiles/PGS004355.txt.gz
PGS005194
(VPGS_PDW)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Platelet distribution width variance platelet component distribution width 9,454,587
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005194/ScoringFiles/PGS005194.txt.gz
PGS000275
(PECAM-1)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Platelet endothelial cell adhesion molecule (PECAM-1) serum levels blood protein amount 552,010
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000275/ScoringFiles/PGS000275.txt.gz
PGS001999
(portability-PLR_play_computer)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Plays computer games lifestyle measurement 50,215
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001999/ScoringFiles/PGS001999.txt.gz
PGS002217
(portability-ldpred2_play_computer)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Plays computer games lifestyle measurement 938,047
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002217/ScoringFiles/PGS002217.txt.gz
PGS019280
(TPMI_480_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Pneumonia pneumonia 144
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019280/ScoringFiles/PGS019280.txt.gz
PGS019281
(TPMI_480_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Pneumonia pneumonia 149,980
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019281/ScoringFiles/PGS019281.txt.gz
PGS019282
(TPMI_480_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Pneumonia pneumonia 517,334
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019282/ScoringFiles/PGS019282.txt.gz
PGS019283
(TPMI_480_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Pneumonia pneumonia 983,820
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019283/ScoringFiles/PGS019283.txt.gz
PGS019284
(TPMI_480_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Pneumonia pneumonia 947,856
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019284/ScoringFiles/PGS019284.txt.gz
PGS001810
(portability-PLR_200.1)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Polycythemia vera acquired polycythemia vera 67
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001810/ScoringFiles/PGS001810.txt.gz
PGS001051
(GBE_HC96)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Polymyalgia rheumatica polymyalgia rheumatica 69
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001051/ScoringFiles/PGS001051.txt.gz
PGS001878
(portability-PLR_717)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Polymyalgia rheumatica polymyalgia rheumatica 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001878/ScoringFiles/PGS001878.txt.gz
PGS002091
(portability-ldpred2_717)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Polymyalgia rheumatica polymyalgia rheumatica 129,938
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002091/ScoringFiles/PGS002091.txt.gz
PGS018734
(TPMI_250.6_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 669
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018734/ScoringFiles/PGS018734.txt.gz
PGS018735
(TPMI_250.6_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 939,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018735/ScoringFiles/PGS018735.txt.gz
PGS018736
(TPMI_250.6_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 54,980
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018736/ScoringFiles/PGS018736.txt.gz
PGS018737
(TPMI_250.6_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 983,767
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018737/ScoringFiles/PGS018737.txt.gz
PGS018738
(TPMI_250.6_PRSmix+)
 PGP000835 |
Chen HH et al. Nature (2025)
 Polyneuropathy in diabetes diabetic neuropathy 1,071,477
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018738/ScoringFiles/PGS018738.txt.gz
Showing 4901 to 4950 of 6972 rows