Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004137
(sbayesr.auto.GCST004988.Breast_cancer)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Breast cancer breast carcinoma 950,524
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004137/ScoringFiles/PGS004137.txt.gz
PGS019279
(TPMI_476_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Allergic rhinitis allergic rhinitis 950,545
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019279/ScoringFiles/PGS019279.txt.gz
PGS002231
(portability-ldpred2_years_of_edu)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Qualifications (years of education) educational attainment 950,845
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002231/ScoringFiles/PGS002231.txt.gz
PGS018688
(TPMI_244.4_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Hypothyroidism NOS hypothyroidism 951,538
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018688/ScoringFiles/PGS018688.txt.gz
PGS004883
(INTERVENE_MegaPRS_Knee_osteoarthritis)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Knee osteoarthritis osteoarthritis, knee 952,133
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004883/ScoringFiles/PGS004883.txt.gz
PGS019329
(TPMI_528.1_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Stomatitis and mucositis mucositis 953,174
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019329/ScoringFiles/PGS019329.txt.gz
PGS018890
(TPMI_285_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other anemias anemia 953,189
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018890/ScoringFiles/PGS018890.txt.gz
PGS019681
(TPMI_716_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other arthropathies arthropathy 953,818
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019681/ScoringFiles/PGS019681.txt.gz
PGS018769
(TPMI_250.24_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Type 2 diabetes with neurological manifestations type 2 diabetes mellitus 954,026
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018769/ScoringFiles/PGS018769.txt.gz
PGS019125
(TPMI_389.4_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Tinnitus Tinnitus 954,220
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019125/ScoringFiles/PGS019125.txt.gz
PGS002683
(repro_ChildLess.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Childless reproductive behavior trait 954,898
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002683/ScoringFiles/PGS002683.txt.gz
PGS019204
(TPMI_427.5_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Arrhythmia cardiac NOS cardiac arrhythmia 955,432
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019204/ScoringFiles/PGS019204.txt.gz
PGS002209
(portability-ldpred2_more_evening)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Morning/evening person (chronotype) chronotype measurement 955,439
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002209/ScoringFiles/PGS002209.txt.gz
PGS004938
(pgs_data_ldpred)
 PGP000666 |
Kovalenko E et al. Front Med (Lausanne) (2024)
 Severe COVID-19 course COVID-19 955,503
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004938/ScoringFiles/PGS004938.txt.gz
PGS002139
(portability-ldpred2_geek_time)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Time spent watching television (TV) or using computer lifestyle measurement 956,532
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002139/ScoringFiles/PGS002139.txt.gz
PGS002689
(disease_ALLERGY_ECZEMA_DIAGNOSED.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Eczema Eczematoid dermatitis 957,578
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002689/ScoringFiles/PGS002689.txt.gz
PGS019100
(TPMI_386.3_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Labyrinthitis labyrinthitis 957,643
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019100/ScoringFiles/PGS019100.txt.gz
PGS018838
(TPMI_277_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other disorders of metabolism metabolic disease 957,790
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018838/ScoringFiles/PGS018838.txt.gz
PGS019726
(TPMI_743_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Osteoporosis osteopenia and pathological fracture osteoporosis,
bone fracture		 957,929
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019726/ScoringFiles/PGS019726.txt.gz
PGS004024
(ldpred2.auto.GCST004773.T2D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 958,046
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004024/ScoringFiles/PGS004024.txt.gz
PGS004039
(ldpred2.CV.GCST004773.T2D)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 958,046
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004039/ScoringFiles/PGS004039.txt.gz
PGS002218
(portability-ldpred2_poorer_health)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Overall health rating health trait 958,362
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002218/ScoringFiles/PGS002218.txt.gz
PGS003872
(LDL_PRScsx_ARB_EASweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 LDL cholesterol low density lipoprotein cholesterol measurement 958,649
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003872/ScoringFiles/PGS003872.txt.gz
PGS003878
(HDL_PRScsx_ARB_EASweights)
 PGP000501 |
Shim I et al. Nature Communications (2023)
 HDL cholesterol high density lipoprotein cholesterol measurement 958,649
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003878/ScoringFiles/PGS003878.txt.gz
PGS019756
(TPMI_790_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nonspecific findings on examination of blood abnormal result of function studies 959,344
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019756/ScoringFiles/PGS019756.txt.gz
PGS019633
(TPMI_706_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Diseases of sebaceous glands sebaceous gland disorder 959,673
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019633/ScoringFiles/PGS019633.txt.gz
PGS018990
(TPMI_340_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Migraine migraine disorder 959,731
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018990/ScoringFiles/PGS018990.txt.gz
PGS005244
(T2D_PRS_PRS_CSx_META_F_AMR)
 PGP000742 |
Guo B G et al. Nat Commun (2025)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 960,470
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005244/ScoringFiles/PGS005244.txt.gz
PGS018940
(TPMI_296.2_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Depression depressive disorder 961,120
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018940/ScoringFiles/PGS018940.txt.gz
PGS019384
(TPMI_574_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cholelithiasis and cholecystitis cholelithiasis 961,215
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019384/ScoringFiles/PGS019384.txt.gz
PGS005346
(LDpred2)
 PGP000771 |
Tanha HM et al. Eur J Hum Genet (2026)
 Breast carcinoma breast carcinoma 961,355
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005346/ScoringFiles/PGS005346.txt.gz
PGS019638
(TPMI_706.1_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Acne acne 961,798
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019638/ScoringFiles/PGS019638.txt.gz
PGS004149
(sbayesr.auto.GCST90018959.Height)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Height body height 962,278
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004149/ScoringFiles/PGS004149.txt.gz
PGS019294
(TPMI_497_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Bronchitis bronchitis 962,291
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019294/ScoringFiles/PGS019294.txt.gz
PGS019239
(TPMI_433.3_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cerebral ischemia Cerebral ischemia 962,458
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019239/ScoringFiles/PGS019239.txt.gz
PGS003277
(ExPRSweb_Creatine_eGFRcrea-overall-IV-2GC_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Estimated glomerular filtration rate (Creatine) glomerular filtration rate,
creatine level		 963,494
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003277/ScoringFiles/PGS003277.txt.gz
PGS002785
(SCZ_SDPR)
 PGP000370 |
Gui Y et al. Transl Psychiatry (2022)
 Schizophrenia schizophrenia 964,422
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002785/ScoringFiles/PGS002785.txt.gz
PGS019394
(TPMI_575_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Other biliary tract disease biliary tract disorder 964,528
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019394/ScoringFiles/PGS019394.txt.gz
PGS005238
(LDpred2)
 PGP000741 |
Tanha HM et al. HGG Adv (2025)
 Prostate carcinoma prostate carcinoma 964,607
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005238/ScoringFiles/PGS005238.txt.gz
PGS005122
(forAFR_fromAMR)
 PGP000703 |
Tsuo K et al. Cell Genom (2022)
 Asthma asthma 965,078
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005122/ScoringFiles/PGS005122.txt.gz
PGS002680
(body_BALDING1.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Balding Type 1 balding measurement 965,079
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002680/ScoringFiles/PGS002680.txt.gz
PGS005137
(forSAS_fromAMR)
 PGP000703 |
Tsuo K et al. Cell Genom (2022)
 Asthma asthma 965,403
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005137/ScoringFiles/PGS005137.txt.gz
PGS005132
(forEUR_fromAMR)
 PGP000703 |
Tsuo K et al. Cell Genom (2022)
 Asthma asthma 965,696
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005132/ScoringFiles/PGS005132.txt.gz
PGS019339
(TPMI_531.3_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Duodenal ulcer duodenal ulcer 966,134
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019339/ScoringFiles/PGS019339.txt.gz
PGS019426
(TPMI_580.32_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nephritis and nephropathy with pathological lesion Nephropathy,
nephritis		 966,152
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019426/ScoringFiles/PGS019426.txt.gz
PGS002143
(portability-ldpred2_hand_grip_strength)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Hand grip strength (mean of both) grip strength measurement 966,283
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002143/ScoringFiles/PGS002143.txt.gz
PGS018682
(TPMI_244_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Hypothyroidism hypothyroidism 966,339
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018682/ScoringFiles/PGS018682.txt.gz
PGS002202
(portability-ldpred2_log_water_mass)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Whole body water mass whole body water mass 966,737
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002202/ScoringFiles/PGS002202.txt.gz
PGS019566
(TPMI_626_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Disorders of menstruation and other abnormal bleeding from female genital tract menstrual disorder 966,753
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019566/ScoringFiles/PGS019566.txt.gz
PGS019436
(TPMI_585.3_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Chronic renal failure CKD chronic kidney disease 966,773
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019436/ScoringFiles/PGS019436.txt.gz
Showing 4901 to 4950 of 6982 rows