Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS005231
(GRS142_CAD)
 PGP000738 |
Severance LM et al. JACC Cardiovasc Imaging (2021)
 Coronary artery disease coronary artery disease 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005231/ScoringFiles/PGS005231.txt.gz
PGS005230
(PRS71_STROKE)
 PGP000736 |
Ma Y et al. Stroke (2023)
 Stroke stroke 71
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005230/ScoringFiles/PGS005230.txt.gz
PGS005219
(PRS_BMIadjOSA)
 PGP000734 |
Kurniansyah N et al. EBioMedicine (2025)
 Obstructive sleep apnea (AdjustedBMI) obstructive sleep apnea 982,740
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005219/ScoringFiles/PGS005219.txt.gz
PGS005220
(PRS_BMIunadjOSA)
 PGP000734 |
Kurniansyah N et al. EBioMedicine (2025)
 Obstructive sleep apnea (UnadjustedBMI) obstructive sleep apnea 984,184
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005220/ScoringFiles/PGS005220.txt.gz
PGS005217
(PRS_PAD)
 PGP000732 |
Flores AM et al. JAMA Cardiol (2025)
 Peripheral artery disease peripheral arterial disease 1,296,292
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005217/ScoringFiles/PGS005217.txt.gz
PGS005211
(AUDIT_C)
 PGP000731 |
Deng WQ et al. Alcohol Alcohol (2024)
 Alcohol use disorder (3-item consumption index) alcohol use disorder measurement 2,338,199
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005211/ScoringFiles/PGS005211.txt.gz
PGS005212
(AUDIT_P)
 PGP000731 |
Deng WQ et al. Alcohol Alcohol (2024)
 Alcohol use disorder (7-item problematic use index) alcohol use disorder measurement 384,933
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005212/ScoringFiles/PGS005212.txt.gz
PGS005213
(AUD)
 PGP000731 |
Deng WQ et al. Alcohol Alcohol (2024)
 Alcohol use disorder by DSM-V alcohol use disorder measurement 336,813
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005213/ScoringFiles/PGS005213.txt.gz
PGS005214
(PAU)
 PGP000731 |
Deng WQ et al. Alcohol Alcohol (2024)
 Problematic alcohol use alcohol use disorder measurement 453,914
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005214/ScoringFiles/PGS005214.txt.gz
PGS005215
(addiction_rf)
 PGP000731 |
Deng WQ et al. Alcohol Alcohol (2024)
 Addiction risk factors substance-related disorder 11,627
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005215/ScoringFiles/PGS005215.txt.gz
PGS005216
(drinks_per_week)
 PGP000731 |
Deng WQ et al. Alcohol Alcohol (2024)
 Drinks per week alcohol consumption quality 221,689
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005216/ScoringFiles/PGS005216.txt.gz
PGS005207
(BCC_PRS)
 PGP000729 |
Gibson TM et al. Nat Med (2024)
 Basal cell carcinoma basal cell carcinoma 29
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005207/ScoringFiles/PGS005207.txt.gz
PGS005208
(Melanoma_PRS)
 PGP000729 |
Gibson TM et al. Nat Med (2024)
 Melanoma melanoma 67
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005208/ScoringFiles/PGS005208.txt.gz
PGS005209
(SCC_PRS)
 PGP000729 |
Gibson TM et al. Nat Med (2024)
 Squamous cell carcinoma squamous cell carcinoma 20
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005209/ScoringFiles/PGS005209.txt.gz
PGS005210
(Thyroid_PRS)
 PGP000729 |
Gibson TM et al. Nat Med (2024)
 Thyroid cancer thyroid carcinoma 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005210/ScoringFiles/PGS005210.txt.gz
PGS005206
(BMD_PRS)
 PGP000728 |
Prijatelj V et al. Bone (2024)
 Bone mineral density bone tissue density 81
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005206/ScoringFiles/PGS005206.txt.gz
PGS005205
(PRS130_Pca)
 PGP000726 |
Benafif S et al. BJU Int (2021)
 Prostate cancer prostate carcinoma 130
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005205/ScoringFiles/PGS005205.txt.gz
PGS005172
(VPGS_IRF)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Immature fraction of reticulocytes variance reticulocyte amount 9,469,602
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005172/ScoringFiles/PGS005172.txt.gz
PGS005173
(VPGS_PCT)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Plateletcrit variance platelet crit 9,451,377
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005173/ScoringFiles/PGS005173.txt.gz
PGS005174
(VPGS_LYMPH)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Lymphocyte count variance lymphocyte count 9,501,646
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005174/ScoringFiles/PGS005174.txt.gz
PGS005175
(VPGS_BASO)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Basophil count variance basophil count 9,437,557
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005175/ScoringFiles/PGS005175.txt.gz
PGS005176
(VPGS_RET)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Reticulocyte count variance reticulocyte count 9,469,884
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005176/ScoringFiles/PGS005176.txt.gz
PGS005177
(VPGS_HCT)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Hematocrit variance hematocrit 9,502,208
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005177/ScoringFiles/PGS005177.txt.gz
PGS005178
(VPGS_HGB)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Hemoglobin concentration variance hemoglobin measurement 9,500,975
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005178/ScoringFiles/PGS005178.txt.gz
PGS005179
(VPGS_HLR)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 High light scatter reticulocyte count variance reticulocyte count 9,481,520
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005179/ScoringFiles/PGS005179.txt.gz
PGS005180
(VPGS_HLR_P)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 High light scatter reticulocyte percentage of red cells variance reticulocyte amount 9,481,225
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005180/ScoringFiles/PGS005180.txt.gz
PGS005181
(VPGS_BASO_P)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Basophil percentage of white cells variance basophil percentage of leukocytes 9,493,222
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005181/ScoringFiles/PGS005181.txt.gz
PGS005182
(VPGS_EO)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Eosinophil count variance eosinophil count 8,862,968
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005182/ScoringFiles/PGS005182.txt.gz
PGS005183
(VPGS_EO_P)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Eosinophil percentage of white cells variance eosinophil percentage of leukocytes 9,498,015
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005183/ScoringFiles/PGS005183.txt.gz
PGS005184
(VPGS_LYMPH_P)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Lymphocyte percentage of white cells variance lymphocyte percentage of leukocytes 9,502,358
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005184/ScoringFiles/PGS005184.txt.gz
PGS005185
(VPGS_MCHC)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Mean corpuscular hemoglobin concentration variance mean corpuscular hemoglobin concentration 9,502,181
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005185/ScoringFiles/PGS005185.txt.gz
PGS005186
(VPGS_MCH)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Mean corpuscular hemoglobin variance mean corpuscular hemoglobin 9,498,745
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005186/ScoringFiles/PGS005186.txt.gz
PGS005187
(VPGS_MCV)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Mean corpuscular volume variance erythrocyte volume 9,500,832
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005187/ScoringFiles/PGS005187.txt.gz
PGS005188
(VPGS_MPV)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Mean platelet volume variance platelet volume 9,454,052
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005188/ScoringFiles/PGS005188.txt.gz
PGS005189
(VPGS_MONO)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Monocyte count variance monocyte count 9,489,073
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005189/ScoringFiles/PGS005189.txt.gz
PGS005190
(VPGS_MONO_P)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Monocyte percentage of white cells variance monocyte percentage of leukocytes 9,488,343
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005190/ScoringFiles/PGS005190.txt.gz
PGS005191
(VPGS_NEUT)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Neutrophil count variance neutrophil count 9,499,020
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005191/ScoringFiles/PGS005191.txt.gz
PGS005192
(VPGS_NEUT_P)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Neutrophil percentage of white cells variance neutrophil percentage of leukocytes 9,499,990
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005192/ScoringFiles/PGS005192.txt.gz
PGS005193
(VPGS_PLT)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Platelet count variance platelet count 9,451,248
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005193/ScoringFiles/PGS005193.txt.gz
PGS005194
(VPGS_PDW)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Platelet distribution width variance platelet component distribution width 9,454,587
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005194/ScoringFiles/PGS005194.txt.gz
PGS005195
(VPGS_RBC)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Red blood cell count variance erythrocyte count 9,501,618
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005195/ScoringFiles/PGS005195.txt.gz
PGS005196
(VPGS_RET_P)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Reticulocyte fraction of red cells variance reticulocyte amount 9,470,586
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005196/ScoringFiles/PGS005196.txt.gz
PGS005197
(VPGS_WBC)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 White blood cell count variance leukocyte quantity 9,503,677
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005197/ScoringFiles/PGS005197.txt.gz
PGS005171
(PRS142_AF)
 PGP000719 |
Dai L et al. Diabetes Metab Syndr (2024)
 Atrial fibrillation atrial fibrillation 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005171/ScoringFiles/PGS005171.txt.gz
PGS005170
(iPRS_DEM)
 PGP000718 |
D'Aoust T et al. Alzheimers Dement (2025)
 All-cause dementia dementia 1,320,229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005170/ScoringFiles/PGS005170.txt.gz
PGS005169
(PRS25_LUAD)
 PGP000713 |
Blechter B et al. JAMA Netw Open (2023)
 Lung adenocarcinoma lung adenocarcinoma 25
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005169/ScoringFiles/PGS005169.txt.gz
PGS005168
(PRSAF)
 PGP000712 |
Roselli C et al. Nat Genet (2025)
 Atrial fibrillation atrial fibrillation 382,963
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005168/ScoringFiles/PGS005168.txt.gz
PGS005160
(PRS-ESC)
 PGP000711 |
Zhu M et al. PLoS Med (2025)
 Esophageal cancer esophageal carcinoma 11
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005160/ScoringFiles/PGS005160.txt.gz
PGS005161
(PRS-GC)
 PGP000711 |
Zhu M et al. PLoS Med (2025)
 Stomach cancer gastric cancer 12
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005161/ScoringFiles/PGS005161.txt.gz
PGS005162
(PRS-CRC)
 PGP000711 |
Zhu M et al. PLoS Med (2025)
 Colorectal cancer colorectal carcinoma 11,462
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005162/ScoringFiles/PGS005162.txt.gz
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