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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
Show
only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS001098
(GBE_BIN_FC2001747)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Hair color, red
strand of hair color
1,621
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001098/ScoringFiles/PGS001098.txt.gz
PGS001099
(GBE_INI5085)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Spherical power (left eye)
refractive error measurement
6,639
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001099/ScoringFiles/PGS001099.txt.gz
PGS001100
(GBE_INI5084)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Spherical power (right eye)
refractive error measurement
7,350
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001100/ScoringFiles/PGS001100.txt.gz
PGS001101
(GBE_INI23099)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Body fat percentage
body fat percentage
27,396
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001101/ScoringFiles/PGS001101.txt.gz
PGS001102
(GBE_INI23123)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Body fat percentage (left arm)
body fat percentage
25,266
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001102/ScoringFiles/PGS001102.txt.gz
PGS001103
(GBE_INI23115)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Body fat percentage (left leg)
body fat percentage
28,134
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001103/ScoringFiles/PGS001103.txt.gz
PGS001104
(GBE_INI23111)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Body fat percentage (right leg)
body fat percentage
28,163
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001104/ScoringFiles/PGS001104.txt.gz
PGS001105
(GBE_INI23127)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Body fat percentage (trunk fat)
body fat percentage
25,651
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001105/ScoringFiles/PGS001105.txt.gz
PGS001106
(GBE_INI23119)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Arm fat percentage (R)
body fat percentage
23,943
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001106/ScoringFiles/PGS001106.txt.gz
PGS001107
(GBE_BIN30030510)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
UACR [> 30 mg/g]
urinary albumin to creatinine ratio
1,040
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001107/ScoringFiles/PGS001107.txt.gz
PGS001108
(GBE_INI23105)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Basal metabolic rate
base metabolic rate measurement
32,154
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001108/ScoringFiles/PGS001108.txt.gz
PGS001109
(GBE_HC1021)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Vasomotor and allergic rhinitis (time-to-event)
vasomotor rhinitis
,
allergic rhinitis
1,910
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001109/ScoringFiles/PGS001109.txt.gz
PGS001110
(GBE_HC1209)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Reactive arthropathies (time-to-event)
reactive arthritis
6
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001110/ScoringFiles/PGS001110.txt.gz
PGS001111
(GBE_cancer1038)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Male genital tract cancer
male reproductive organ cancer
313
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001111/ScoringFiles/PGS001111.txt.gz
PGS001112
(GBE_BIN_FC1006154)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Aspirin
aspirin use measurement
499
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001112/ScoringFiles/PGS001112.txt.gz
PGS001113
(GBE_BIN_FC7006154)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Aspirin use self-reported
aspirin use measurement
790
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001113/ScoringFiles/PGS001113.txt.gz
PGS001114
(GBE_BIN_FC8006154)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Ibuprofen use, self-reported
NSAID use measurement
,
self-reported trait
419
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001114/ScoringFiles/PGS001114.txt.gz
PGS001115
(GBE_BIN_FC9006154)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Paracetamol use self-reported
NSAID use measurement
,
self-reported trait
4,673
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001115/ScoringFiles/PGS001115.txt.gz
PGS001116
(GBE_BIN_FC2006154)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Ibuprofen use
NSAID use measurement
174
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001116/ScoringFiles/PGS001116.txt.gz
PGS001117
(GBE_BIN_FC10002986)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Started insulin within one year diagnosis of diabetes
insulin use measurement
68
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001117/ScoringFiles/PGS001117.txt.gz
PGS001118
(GBE_BIN_FC10002492)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Taking other prescription medications
drug use measurement
1,846
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001118/ScoringFiles/PGS001118.txt.gz
PGS001119
(GBE_INI46)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Left hand grip strength
grip strength measurement
13,767
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001119/ScoringFiles/PGS001119.txt.gz
PGS001120
(GBE_INI47)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Right hand grip strength
grip strength measurement
12,644
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001120/ScoringFiles/PGS001120.txt.gz
PGS001123
(GBE_BIN100240)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Coffee consumption
coffee consumption measurement
48
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001123/ScoringFiles/PGS001123.txt.gz
PGS001124
(GBE_BIN_FC30001508)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Coffee consumption (ground coffee)
coffee consumption measurement
9,694
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001124/ScoringFiles/PGS001124.txt.gz
PGS001125
(GBE_BIN_FC20001508)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Coffee consumption (instant coffee)
coffee consumption measurement
432
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001125/ScoringFiles/PGS001125.txt.gz
PGS001126
(GBE_INI1498)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Coffee intake
coffee consumption measurement
3,154
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001126/ScoringFiles/PGS001126.txt.gz
PGS001127
(GBE_BIN_FC10020116)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Never Smoker
smoking status measurement
12,310
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001127/ScoringFiles/PGS001127.txt.gz
PGS001128
(GBE_BIN_FC20020116)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Previous smoker
smoking status measurement
4,348
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001128/ScoringFiles/PGS001128.txt.gz
PGS001129
(GBE_BIN_FC30022506)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Smoking status (ever vs never smokers)
smoking status measurement
974
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001129/ScoringFiles/PGS001129.txt.gz
PGS001130
(GBE_INI2887)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Number of cigarettes previously smoked per day
cigarettes per day measurement
725
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001130/ScoringFiles/PGS001130.txt.gz
PGS001131
(GBE_HC530)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Zoster [herpes zoster] (time-to-event)
herpes zoster
82
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001131/ScoringFiles/PGS001131.txt.gz
PGS001132
(GBE_FH1113)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Family history of chronic bronchitis/emphysema
family history
1,530
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001132/ScoringFiles/PGS001132.txt.gz
PGS001133
(GBE_INI4079)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Diastolic BP (AR)
diastolic blood pressure
14,103
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001133/ScoringFiles/PGS001133.txt.gz
PGS001134
(GBE_INI4080)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Systolic BP (AR)
systolic blood pressure
15,481
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001134/ScoringFiles/PGS001134.txt.gz
PGS001135
(GBE_HC78)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Arthritis (nos)
arthritic joint disease
1,028
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001135/ScoringFiles/PGS001135.txt.gz
PGS001136
(GBE_HC413)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Hematologic disease, genetic
hematologic disorder
30
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001136/ScoringFiles/PGS001136.txt.gz
PGS001137
(GBE_HC302)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Retinal detachment
retinal detachment
321
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001137/ScoringFiles/PGS001137.txt.gz
PGS001138
(GBE_BIN10030820)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Rheumatoid factor [> 16 IU/mL]
rheumatoid factor measurement
456
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001138/ScoringFiles/PGS001138.txt.gz
PGS001139
(GBE_BIN_FC10002644)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Light smokers, at least 100 smokes in lifetime
smoking behavior trait
11
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001139/ScoringFiles/PGS001139.txt.gz
PGS001140
(GBE_HC1190)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Seborrheic keratosis (time-to-event)
seborrheic keratosis
1,368
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001140/ScoringFiles/PGS001140.txt.gz
PGS001141
(GBE_BIN_FC10001757)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Facial ageing (looking younger than you are)
skin aging
7,676
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001141/ScoringFiles/PGS001141.txt.gz
PGS001142
(GBE_INI25829)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Volume of grey matter in Intracalcarine Cortex (R)
grey matter volume measurement
2,215
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001142/ScoringFiles/PGS001142.txt.gz
PGS001143
(GBE_INI25867)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Volume of grey matter in Parietal Operculum Cortex (R)
grey matter volume measurement
699
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001143/ScoringFiles/PGS001143.txt.gz
PGS001144
(GBE_INI23124)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Arm fat mass (L)
fat pad mass
23,676
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001144/ScoringFiles/PGS001144.txt.gz
PGS001145
(GBE_INI23120)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Arm fat mass (R)
fat pad mass
23,528
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001145/ScoringFiles/PGS001145.txt.gz
PGS001146
(GBE_INI23121)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Arm fat-free mass (R)
fat pad mass
29,063
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001146/ScoringFiles/PGS001146.txt.gz
PGS001147
(GBE_INI23112)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Leg fat mass (R)
fat pad mass
23,565
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001147/ScoringFiles/PGS001147.txt.gz
PGS001148
(GBE_INI23128)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Trunk fat mass
fat pad mass
29,233
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001148/ScoringFiles/PGS001148.txt.gz
PGS001149
(GBE_INI23100)
PGP000244
|
Tanigawa Y
et al.
PLoS Genet (2022)
Whole body fat mass
fat pad mass
27,550
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001149/ScoringFiles/PGS001149.txt.gz
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