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Ancestry Data
Data Description
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,
EFO_0001645
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breast cancer
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,
BMI
,
EFO_0001645
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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
Show
only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS005115
(PGS_T2D_beta_cell)
PGP000701
|
Loesch DP
et al.
Nat Commun (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
30
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005115/ScoringFiles/PGS005115.txt.gz
PGS005116
(PGS_T2D_lipodystrophy)
PGP000701
|
Loesch DP
et al.
Nat Commun (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
20
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005116/ScoringFiles/PGS005116.txt.gz
PGS005117
(PGS_T2D_liver_lipid)
PGP000701
|
Loesch DP
et al.
Nat Commun (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
5
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005117/ScoringFiles/PGS005117.txt.gz
PGS005118
(PGS_T2D_obesity)
PGP000701
|
Loesch DP
et al.
Nat Commun (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
5
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005118/ScoringFiles/PGS005118.txt.gz
PGS005119
(PGS_T2D_proinsulin)
PGP000701
|
Loesch DP
et al.
Nat Commun (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
7
-
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005119/ScoringFiles/PGS005119.txt.gz
PGS005108
(PRSdiabetes)
PGP000697
|
Takase M
et al.
J Atheroscler Thromb (2023)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
42,845
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005108/ScoringFiles/PGS005108.txt.gz
PGS005107
(PGS-PSA111)
PGP000696
|
Shi M
et al.
EBioMedicine (2023)
Prostate-specific antigen (PSA) levels
prostate specific antigen amount
111
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005107/ScoringFiles/PGS005107.txt.gz
PGS005104
(PRSAFR)
PGP000694
|
Jia G
et al.
Nat Genet (2024)
Breast cancer
breast carcinoma
89
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005104/ScoringFiles/PGS005104.txt.gz
PGS005105
(PRSAFR_ER+)
PGP000694
|
Jia G
et al.
Nat Genet (2024)
ER-positive breast cancer
estrogen-receptor positive breast cancer
44
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005105/ScoringFiles/PGS005105.txt.gz
PGS005106
(PRSAFR_ER−)
PGP000694
|
Jia G
et al.
Nat Genet (2024)
ER-negative breast cancer
estrogen-receptor negative breast cancer
24
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005106/ScoringFiles/PGS005106.txt.gz
PGS005098
(psa2024_prs_318)
PGP000692
|
Hoffmann TJ
et al.
Nat Genet (2025)
Prostate specific antigen
prostate specific antigen amount
318
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005098/ScoringFiles/PGS005098.txt.gz
PGS005099
(psa2024_prs_447)
PGP000692
|
Hoffmann TJ
et al.
Nat Genet (2025)
Prostate specific antigen
prostate specific antigen amount
447
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005099/ScoringFiles/PGS005099.txt.gz
PGS005100
(psa2024_prs_disc)
PGP000692
|
Hoffmann TJ
et al.
Nat Genet (2025)
Prostate specific antigen
prostate specific antigen amount
1,070,227
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005100/ScoringFiles/PGS005100.txt.gz
PGS005101
(psa2024_prs_joint)
PGP000692
|
Hoffmann TJ
et al.
Nat Genet (2025)
Prostate specific antigen
prostate specific antigen amount
1,070,230
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005101/ScoringFiles/PGS005101.txt.gz
PGS005097
(prscsx_meta_HF)
PGP000691
|
Lee DSM
et al.
Nat Genet (2025)
Heart failure
heart failure
1,274,692
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005097/ScoringFiles/PGS005097.txt.gz
PGS005096
(CAC_GRS)
PGP000689
|
Mishra PP
et al.
Am J Prev Cardiol (2024)
Coronary artery calcification
coronary artery calcification
11
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005096/ScoringFiles/PGS005096.txt.gz
PGS005095
(WHRadjBMI_GRS)
PGP000686
|
Christiansen MR
et al.
Diabetes (2023)
WHR adjusted for BMI
BMI-adjusted waist-hip ratio
481
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005095/ScoringFiles/PGS005095.txt.gz
PGS005091
(PGS_LDP2Auto)
PGP000684
|
Abramowitz SA
et al.
JAMA (2024)
Coronary artery disease
coronary artery disease
1,428,772
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005091/ScoringFiles/PGS005091.txt.gz
PGS005092
(PGS_prscsx)
PGP000684
|
Abramowitz SA
et al.
JAMA (2024)
Coronary artery disease
coronary artery disease
1,279,502
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005092/ScoringFiles/PGS005092.txt.gz
PGS005090
(CKD_PRS_AA)
PGP000683
|
Jones AC
et al.
J Am Soc Nephrol (2024)
Chronic kidney disease (stage 3 or higher)
chronic kidney disease
1,142,436
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005090/ScoringFiles/PGS005090.txt.gz
PGS005086
(PGS64518_OC)
PGP000680
|
Barnes DR
et al.
medRxiv (2024)
|
Pre
Non-mucinous epithelial ovarian cancer
ovarian carcinoma
64,518
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005086/ScoringFiles/PGS005086.txt.gz
PGS005087
(PGS5957_OC)
PGP000680
|
Barnes DR
et al.
medRxiv (2024)
|
Pre
Non-mucinous epithelial ovarian cancer
ovarian carcinoma
5,957
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005087/ScoringFiles/PGS005087.txt.gz
PGS005088
(PGS3448_OC)
PGP000680
|
Barnes DR
et al.
medRxiv (2024)
|
Pre
Non-mucinous epithelial ovarian cancer
ovarian carcinoma
3,448
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005088/ScoringFiles/PGS005088.txt.gz
PGS005089
(PGS400_OC)
PGP000680
|
Barnes DR
et al.
medRxiv (2024)
|
Pre
Non-mucinous epithelial ovarian cancer
ovarian carcinoma
400
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005089/ScoringFiles/PGS005089.txt.gz
PGS004956
(Hemoglobin_Mean_INT_ldpred_AFRss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004956/ScoringFiles/PGS004956.txt.gz
PGS004957
(Hemoglobin_Mean_INT_ldpred_EURss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004957/ScoringFiles/PGS004957.txt.gz
PGS004958
(Hemoglobin_Mean_INT_ldpred_HISss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004958/ScoringFiles/PGS004958.txt.gz
PGS004959
(Hemoglobin_Mean_INT_ldpred_METAss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004959/ScoringFiles/PGS004959.txt.gz
PGS004960
(Hemoglobin_Mean_INT_ldpred_METAss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004960/ScoringFiles/PGS004960.txt.gz
PGS004961
(Hemoglobin_Mean_INT_ldpred_METAss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004961/ScoringFiles/PGS004961.txt.gz
PGS004962
(Hemoglobin_Mean_INT_prscs_AFRss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004962/ScoringFiles/PGS004962.txt.gz
PGS004963
(Hemoglobin_Mean_INT_prscs_EURss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004963/ScoringFiles/PGS004963.txt.gz
PGS004964
(Hemoglobin_Mean_INT_prscs_HISss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004964/ScoringFiles/PGS004964.txt.gz
PGS004965
(Hemoglobin_Mean_INT_prscs_METAss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004965/ScoringFiles/PGS004965.txt.gz
PGS004966
(Hemoglobin_Mean_INT_prscs_METAss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004966/ScoringFiles/PGS004966.txt.gz
PGS004967
(Hemoglobin_Mean_INT_prscs_METAss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,273,252
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004967/ScoringFiles/PGS004967.txt.gz
PGS004968
(Hemoglobin_Mean_INT_prscsx_METAweight)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
Hemoglobin
hemoglobin measurement
1,277,825
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004968/ScoringFiles/PGS004968.txt.gz
PGS004969
(LDLC_Mean_INT_ldpred_AFRss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004969/ScoringFiles/PGS004969.txt.gz
PGS004970
(LDLC_Mean_INT_ldpred_EURss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004970/ScoringFiles/PGS004970.txt.gz
PGS004971
(LDLC_Mean_INT_ldpred_HISss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004971/ScoringFiles/PGS004971.txt.gz
PGS004972
(LDLC_Mean_INT_ldpred_METAss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004972/ScoringFiles/PGS004972.txt.gz
PGS004973
(LDLC_Mean_INT_ldpred_METAss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004973/ScoringFiles/PGS004973.txt.gz
PGS004974
(LDLC_Mean_INT_ldpred_METAss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,286,612
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004974/ScoringFiles/PGS004974.txt.gz
PGS004975
(LDLC_Mean_INT_prscs_AFRss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004975/ScoringFiles/PGS004975.txt.gz
PGS004976
(LDLC_Mean_INT_prscs_EURss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004976/ScoringFiles/PGS004976.txt.gz
PGS004977
(LDLC_Mean_INT_prscs_HISss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004977/ScoringFiles/PGS004977.txt.gz
PGS004978
(LDLC_Mean_INT_prscs_METAss_afrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004978/ScoringFiles/PGS004978.txt.gz
PGS004979
(LDLC_Mean_INT_prscs_METAss_amrld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004979/ScoringFiles/PGS004979.txt.gz
PGS004980
(LDLC_Mean_INT_prscs_METAss_eurld)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,273,897
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004980/ScoringFiles/PGS004980.txt.gz
PGS004981
(LDLC_Mean_INT_prscsx_METAweight)
PGP000679
|
Gunn S
et al.
HGG Adv (2024)
LDL cholesterol
low density lipoprotein cholesterol measurement
1,277,825
-
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004981/ScoringFiles/PGS004981.txt.gz
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