Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004884
(INTERVENE_MegaPRS_Lung_cancer)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Lung cancer lung carcinoma 655,479
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004884/ScoringFiles/PGS004884.txt.gz
PGS004885
(INTERVENE_MegaPRS_MDD)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Major depressive disorder major depressive disorder 801,544
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004885/ScoringFiles/PGS004885.txt.gz
PGS004886
(INTERVENE_MegaPRS_Melanoma)
 PGP000618 |
Jermy B et al. Nat Commun (2024)
 Melanoma melanoma 692,834
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004886/ScoringFiles/PGS004886.txt.gz
PGS004868
(T2DPGS)
 PGP000617 |
Yun JS et al. Cardiovasc Diabetol (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 6,580,804
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004868/ScoringFiles/PGS004868.txt.gz
PGS004865
(PRS105_BC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 Breast cancer breast carcinoma 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004865/ScoringFiles/PGS004865.txt.gz
PGS004866
(PRS105_ERposBC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 ER-positive breast cancer estrogen-receptor positive breast cancer 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004866/ScoringFiles/PGS004866.txt.gz
PGS004867
(PRS105_ERnegBC)
 PGP000612 |
Gao C et al. J Clin Oncol (2021)
 ER-negative breast cancer estrogen-receptor negative breast cancer 105
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004867/ScoringFiles/PGS004867.txt.gz
PGS004864
(PRS186_BMI)
 PGP000611 |
de Toro-Martín J et al. JCI Insight (2018)
 Body mass index (BMI) body mass index 186
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004864/ScoringFiles/PGS004864.txt.gz
PGS004863
(PRS74_AD)
 PGP000609 |
Sleiman PM et al. Alzheimers Dement (2023)
 Alzheimer's disease Alzheimer disease 74
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004863/ScoringFiles/PGS004863.txt.gz
PGS004861
(hermes.gwama)
 PGP000608 |
Zheng SL et al. Nat Genet (2024)
 Dilated cardiomyopathy dilated cardiomyopathy 713,932
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004861/ScoringFiles/PGS004861.txt.gz
PGS004862
(hermes.mtag)
 PGP000608 |
Zheng SL et al. Nat Genet (2024)
 Dilated cardiomyopathy (MTAG) dilated cardiomyopathy 709,534
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004862/ScoringFiles/PGS004862.txt.gz
PGS004860
(Genome-wide-PRS)
 PGP000607 |
Boumtje V et al. EBioMedicine (2024)
 Lung cancer lung carcinoma 1,143,554
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004860/ScoringFiles/PGS004860.txt.gz
PGS004859
(T2D_PRS_CS)
 PGP000605 |
Deutsch AJ et al. Diabetes Care (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,108,235
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004859/ScoringFiles/PGS004859.txt.gz
PGS004701
(a1c_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 HbA1c HbA1c measurement 1,107,927
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004701/ScoringFiles/PGS004701.txt.gz
PGS004702
(a1c_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 HbA1c HbA1c measurement 6,652,699
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004702/ScoringFiles/PGS004702.txt.gz
PGS004703
(a1c_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 HbA1c HbA1c measurement 3,872,159
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004703/ScoringFiles/PGS004703.txt.gz
PGS004704
(a1c_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 HbA1c HbA1c measurement 6,652,699
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004704/ScoringFiles/PGS004704.txt.gz
PGS004705
(afib_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Atrial Fibrillation atrial fibrillation 3,575,124
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004705/ScoringFiles/PGS004705.txt.gz
PGS004706
(afib_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Atrial Fibrillation atrial fibrillation 3,576,958
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004706/ScoringFiles/PGS004706.txt.gz
PGS004707
(Albumin_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Albumin serum albumin amount 589,303
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004707/ScoringFiles/PGS004707.txt.gz
PGS004708
(Albumin_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Albumin serum albumin amount 2,071,924
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004708/ScoringFiles/PGS004708.txt.gz
PGS004709
(Albumin_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Albumin serum albumin amount 2,659,200
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004709/ScoringFiles/PGS004709.txt.gz
PGS004710
(Albumin_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Albumin serum albumin amount 2,071,924
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004710/ScoringFiles/PGS004710.txt.gz
PGS004711
(ALP_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alkaline phosphatase alkaline phosphatase measurement 634,277
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004711/ScoringFiles/PGS004711.txt.gz
PGS004712
(ALP_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alkaline phosphatase alkaline phosphatase measurement 1,704,295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004712/ScoringFiles/PGS004712.txt.gz
PGS004713
(ALP_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alkaline phosphatase alkaline phosphatase measurement 4,268,599
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004713/ScoringFiles/PGS004713.txt.gz
PGS004714
(ALP_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alkaline phosphatase alkaline phosphatase measurement 1,704,295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004714/ScoringFiles/PGS004714.txt.gz
PGS004715
(ALT_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alanine aminotransferase serum alanine aminotransferase amount 559,731
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004715/ScoringFiles/PGS004715.txt.gz
PGS004716
(ALT_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alanine aminotransferase serum alanine aminotransferase amount 2,283,693
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004716/ScoringFiles/PGS004716.txt.gz
PGS004717
(ALT_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alanine aminotransferase serum alanine aminotransferase amount 1,051,633
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004717/ScoringFiles/PGS004717.txt.gz
PGS004718
(ALT_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alanine aminotransferase serum alanine aminotransferase amount 2,283,693
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004718/ScoringFiles/PGS004718.txt.gz
PGS004719
(AST_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 519,241
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004719/ScoringFiles/PGS004719.txt.gz
PGS004720
(AST_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 1,000,300
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004720/ScoringFiles/PGS004720.txt.gz
PGS004721
(AST_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 1,196,185
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004721/ScoringFiles/PGS004721.txt.gz
PGS004722
(AST_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Aspartate aminotransferase level aspartate aminotransferase measurement 868,009
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004722/ScoringFiles/PGS004722.txt.gz
PGS004723
(asthma_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 985,316
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004723/ScoringFiles/PGS004723.txt.gz
PGS004724
(asthma_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 2,342,250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004724/ScoringFiles/PGS004724.txt.gz
PGS004725
(asthma_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 3,972,232
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004725/ScoringFiles/PGS004725.txt.gz
PGS004726
(asthma_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 2,342,250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004726/ScoringFiles/PGS004726.txt.gz
PGS004727
(Basophils_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Basophil count basophil count 6,503
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004727/ScoringFiles/PGS004727.txt.gz
PGS004728
(Basophils_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Basophil count basophil count 6,132,012
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004728/ScoringFiles/PGS004728.txt.gz
PGS004729
(Basophils_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Basophil count basophil count 1,538,675
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004729/ScoringFiles/PGS004729.txt.gz
PGS004730
(Basophils_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Basophil count basophil count 6,132,012
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004730/ScoringFiles/PGS004730.txt.gz
PGS004731
(Bilirubin_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total bilirubin bilirubin measurement 96,003
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004731/ScoringFiles/PGS004731.txt.gz
PGS004732
(Bilirubin_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total bilirubin bilirubin measurement 3,030,080
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004732/ScoringFiles/PGS004732.txt.gz
PGS004733
(bmi_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Body mass index (BMI) body mass index 1,915,187
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004733/ScoringFiles/PGS004733.txt.gz
PGS004734
(bmi_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Body mass index (BMI) body mass index 4,081,121
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004734/ScoringFiles/PGS004734.txt.gz
PGS004735
(bmi_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Body mass index (BMI) body mass index 4,536,322
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004735/ScoringFiles/PGS004735.txt.gz
PGS004736
(bmi_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Body mass index (BMI) body mass index 4,081,121
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004736/ScoringFiles/PGS004736.txt.gz
PGS004737
(breast_cancer_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Breast cancer breast carcinoma 3,666,245
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004737/ScoringFiles/PGS004737.txt.gz
Showing 401 to 450 of 5198 rows