Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000679
(snpnet.Creatinine_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Creatinine in urine [umol/L] creatinine clearance measurement 5,469
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000679/ScoringFiles/PGS000679.txt.gz - Check Terms/Licenses
PGS000680
(snpnet.Cystatin_C)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Cystatin C [mg/L] cystatin C measurement 24,487
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000680/ScoringFiles/PGS000680.txt.gz - Check Terms/Licenses
PGS000681
(snpnet.Direct_bilirubin)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Direct bilirubin [umol/L] bilirubin measurement 3,104
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000681/ScoringFiles/PGS000681.txt.gz - Check Terms/Licenses
PGS000682
(snpnet.eGFR)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 eGFR [ml/min/1.73m2] glomerular filtration rate 17,467
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000682/ScoringFiles/PGS000682.txt.gz - Check Terms/Licenses
PGS000683
(snpnet.Gamma_glutamyltransferase)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gamma-glutamyl transferase [U/L] serum gamma-glutamyl transferase measurement 17,323
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000683/ScoringFiles/PGS000683.txt.gz - Check Terms/Licenses
PGS000684
(snpnet.Glucose)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Glucose [mmol/L] glucose measurement 3,313
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000684/ScoringFiles/PGS000684.txt.gz - Check Terms/Licenses
PGS000685
(snpnet.Glycated_haemoglobin_HbA1c)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 HbA1c [mmol/mol] HbA1c measurement 14,658
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000685/ScoringFiles/PGS000685.txt.gz - Check Terms/Licenses
PGS000686
(snpnet.HDL_cholesterol)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 HDL cholesterol [mmol/L] high density lipoprotein cholesterol measurement 25,069
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000686/ScoringFiles/PGS000686.txt.gz - Check Terms/Licenses
PGS000687
(snpnet.IGF_1)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 IGF-1 [nmol/L] IGF-1 measurement 23,443
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000687/ScoringFiles/PGS000687.txt.gz - Check Terms/Licenses
PGS000688
(snpnet.LDL_direct_adjstatins)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 LDL cholesterol [mmol/L] (statin adjusted) low density lipoprotein cholesterol measurement 16,184
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000688/ScoringFiles/PGS000688.txt.gz - Check Terms/Licenses
PGS000689
(snpnet.Lipoprotein_A)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Lipoprotein A [nmol/L] lipoprotein A measurement 8,308
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000689/ScoringFiles/PGS000689.txt.gz - Check Terms/Licenses
PGS000690
(snpnet.Microalbumin_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Microalbumin in urine [mg/L] urinary microalbumin measurement 111
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000690/ScoringFiles/PGS000690.txt.gz - Check Terms/Licenses
PGS000691
(snpnet.Non_albumin_protein)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Non-albumin protein [g/L] level of serum globulin type protein 18,670
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000691/ScoringFiles/PGS000691.txt.gz - Check Terms/Licenses
PGS000692
(snpnet.Phosphate)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Phosphate [mmol/L] phosphate measurement 12,448
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000692/ScoringFiles/PGS000692.txt.gz - Check Terms/Licenses
PGS000693
(snpnet.Potassium_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Potassium in urine [mmol/L] urine potassium amount 2,423
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000693/ScoringFiles/PGS000693.txt.gz - Check Terms/Licenses
PGS000694
(snpnet.SHBG)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 SHBG [nmol/L] sex hormone-binding globulin measurement 19,328
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000694/ScoringFiles/PGS000694.txt.gz - Check Terms/Licenses
PGS000695
(snpnet.Sodium_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Sodium in urine [mmol/L] urinary metabolite measurement,
sodium measurement		 5,833
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000695/ScoringFiles/PGS000695.txt.gz - Check Terms/Licenses
PGS000696
(snpnet.Testosterone)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Testosterone [nmol/L] testosterone measurement 8,223
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000696/ScoringFiles/PGS000696.txt.gz - Check Terms/Licenses
PGS000697
(snpnet.Total_bilirubin)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Total bilirubin [umol/L] bilirubin measurement 1,159
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000697/ScoringFiles/PGS000697.txt.gz - Check Terms/Licenses
PGS000698
(snpnet.Total_protein)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Total protein [g/L] total blood protein measurement 16,420
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000698/ScoringFiles/PGS000698.txt.gz - Check Terms/Licenses
PGS000699
(snpnet.Triglycerides)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Triglycerides [mmol/L] triglyceride measurement 16,003
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000699/ScoringFiles/PGS000699.txt.gz - Check Terms/Licenses
PGS000700
(snpnet.Urate)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Urate [umol/L] urate measurement 20,171
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000700/ScoringFiles/PGS000700.txt.gz - Check Terms/Licenses
PGS000701
(snpnet.Urea)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Urea [mmol/L] serum urea amount 12,351
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000701/ScoringFiles/PGS000701.txt.gz - Check Terms/Licenses
PGS000702
(snpnet.Vitamin_D)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Vitamin D [nmol/L] vitamin D level 8,012
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000702/ScoringFiles/PGS000702.txt.gz - Check Terms/Licenses
PGS000703
(HC132)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Angina angina pectoris 183,692
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000703/ScoringFiles/PGS000703.txt.gz - Check Terms/Licenses
PGS000704
(HC171)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Alcoholic cirrhosis alcoholic liver cirrhosis 183,271
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000704/ScoringFiles/PGS000704.txt.gz - Check Terms/Licenses
PGS000705
(HC188)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gallstones gallstones 183,458
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000705/ScoringFiles/PGS000705.txt.gz - Check Terms/Licenses
PGS000706
(HC215)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Hypertension hypertension 186,726
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000706/ScoringFiles/PGS000706.txt.gz - Check Terms/Licenses
PGS000707
(HC225)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Cholecystitis Cholecystitis 183,329
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000707/ScoringFiles/PGS000707.txt.gz - Check Terms/Licenses
PGS000708
(HC294)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Kidney failure kidney failure 183,272
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000708/ScoringFiles/PGS000708.txt.gz - Check Terms/Licenses
PGS000709
(HC299)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Heart failure heart failure 183,287
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000709/ScoringFiles/PGS000709.txt.gz - Check Terms/Licenses
PGS000710
(HC326)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Myocardial infarction myocardial infarction 183,566
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000710/ScoringFiles/PGS000710.txt.gz - Check Terms/Licenses
PGS000711
(HC328)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gout gout 183,332
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000711/ScoringFiles/PGS000711.txt.gz - Check Terms/Licenses
PGS000712
(T2D_HbA1c_39)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 T2D (cases vs HbA1c filtered controls) type 2 diabetes mellitus 183,695
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000712/ScoringFiles/PGS000712.txt.gz - Check Terms/Licenses
PGS000713
(T2D)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 183,830
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000713/ScoringFiles/PGS000713.txt.gz - Check Terms/Licenses
PGS000667
(LPA_GRS43)
 PGP000127 |
Trinder M et al. JAMA Cardiol (2020)
 Lipoprotein A lipoprotein A measurement 43
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000667/ScoringFiles/PGS000667.txt.gz
PGS000666
(PGS_LVESVi)
 PGP000126 |
Pirruccello JP et al. Nat Commun (2020)
 Body surface area-indexed left ventricular end-systolic volume left ventricular systolic function measurement 28
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000666/ScoringFiles/PGS000666.txt.gz
PGS000665
(GRS_32)
 PGP000125 |
Marston NA et al. Circulation (2020)
 Ischemic stroke stroke,
Ischemic stroke		 32
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000665/ScoringFiles/PGS000665.txt.gz
PGS000664
(GRS7_GFR)
 PGP000124 |
Gorski M et al. Kidney Int (2020)
 Rapid decline of glomerular filtration rate (GFR) GFR change measurement 7
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000664/ScoringFiles/PGS000664.txt.gz
PGS000663
(wGRS22)
 PGP000123 |
Kim J et al. Cancer Epidemiol Biomarkers Prev (2020)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000663/ScoringFiles/PGS000663.txt.gz
PGS000662
(GRS.PCa.269)
 PGP000122 |
Conti DV et al. Nat Genet (2021)
 Prostate cancer prostate carcinoma 269
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000662/ScoringFiles/PGS000662.txt.gz
PGS000658
(PRS-TC)
 PGP000121 |
Tam CHT et al. Genome Med (2021)
 Total cholesterol total cholesterol measurement 229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000658/ScoringFiles/PGS000658.txt.gz
PGS000659
(PRS-TG)
 PGP000121 |
Tam CHT et al. Genome Med (2021)
 Triglycerides triglyceride measurement 142
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000659/ScoringFiles/PGS000659.txt.gz
PGS000660
(PRS-HDL)
 PGP000121 |
Tam CHT et al. Genome Med (2021)
 HDL cholesterol high density lipoprotein cholesterol measurement 549
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000660/ScoringFiles/PGS000660.txt.gz
PGS000661
(PRS-LDL)
 PGP000121 |
Tam CHT et al. Genome Med (2021)
 LDL cholesterol low density lipoprotein cholesterol measurement 84
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000661/ScoringFiles/PGS000661.txt.gz
PGS000657
(gSOS)
 PGP000120 |
Forgetta V et al. PLoS Med (2020)
 Heel quantitative ultrasound speed of sound (SOS) heel bone mineral density 21,716
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000657/ScoringFiles/PGS000657.txt.gz - Check Terms/Licenses
PGS000655
(NAFLD-10)
 PGP000119 |
Namjou B et al. BMC Med (2019)
 Non-alcoholic fatty liver disease non-alcoholic fatty liver disease 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000655/ScoringFiles/PGS000655.txt.gz
PGS000656
(NAS-11)
 PGP000119 |
Namjou B et al. BMC Med (2019)
 Non-alcoholic fatty liver disease activity score non-alcoholic fatty liver disease severity measurement 11
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000656/ScoringFiles/PGS000656.txt.gz
PGS000353
(PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-08_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Any cancer cancer 14
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000353/ScoringFiles/PGS000353.txt.gz
PGS000354
(PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PRS-CS_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Any cancer cancer 1,118,667
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000354/ScoringFiles/PGS000354.txt.gz
Showing 4551 to 4600 of 5251 rows