Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000798
(157SNP_GRS)
 PGP000187 |
Severance LM et al. J Cardiovasc Comput Tomogr (2019)
 Coronary heart disease coronary artery disorder 157
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000798/ScoringFiles/PGS000798.txt.gz
PGS001497
(GBE_INI25474)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in cingulum cingulate gyrus on FA skeleton (R) neuroimaging measurement,
brain volume		 157
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001497/ScoringFiles/PGS001497.txt.gz
PGS001834
(portability-PLR_362.29)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Macular degeneration (senile) of retina NOS age-related macular degeneration 157
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001834/ScoringFiles/PGS001834.txt.gz
PGS003956
(AD_Kunkle_AFR)
 PGP000503 |
Sofer T et al. Alzheimers Res Ther (2023)
 Alzheimer's disease Alzheimer disease 157
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003956/ScoringFiles/PGS003956.txt.gz
PGS005167
(PRS-PC)
 PGP000711 |
Zhu M et al. PLoS Med (2025)
 Prostate cancer prostate carcinoma 157
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005167/ScoringFiles/PGS005167.txt.gz
PGS004133
(pt_clump_nested.CV.GCST90013534.RA)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Rheumatoid arthritis rheumatoid arthritis 155
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004133/ScoringFiles/PGS004133.txt.gz
PGS004905
(PRS155_AF)
 PGP000638 |
Ma Y et al. Proc Natl Acad Sci U S A (2023)
 Atrial fibrillation atrial fibrillation 155
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004905/ScoringFiles/PGS004905.txt.gz
PGS004326
(PRS154_RA)
 PGP000560 |
Zhang J et al. Environ Health Perspect (2023)
 Rheumatoid arthritis rheumatoid arthritis 154
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004326/ScoringFiles/PGS004326.txt.gz
PGS001862
(portability-PLR_575)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Other biliary tract disease biliary tract disorder 151
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001862/ScoringFiles/PGS001862.txt.gz
PGS000164
(baso_p)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Basophil percentage of white cells basophil percentage of leukocytes 150
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000164/ScoringFiles/PGS000164.txt.gz
PGS000382
(PRSWEB_PHECODE153.2_UKBB-SAIGE-HRC-X153.2_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Colon cancer colon carcinoma 150
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000382/ScoringFiles/PGS000382.txt.gz
PGS000816
(GRS150_ALT)
 PGP000201 |
Pazoki R et al. Nat Commun (2021)
 Alanine transaminase serum alanine aminotransferase amount 150
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000816/ScoringFiles/PGS000816.txt.gz
PGS005111
(PGS_T2D_gwas)
 PGP000701 |
Loesch DP et al. Nat Commun (2025)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 150
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005111/ScoringFiles/PGS005111.txt.gz
PGS000828
(WaistCircumference_PGS_F)
 PGP000210 |
Zubair N et al. Sci Rep (2019)
 Waist circumference (female) waist circumference,
female		 149
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000828/ScoringFiles/PGS000828.txt.gz - Check Terms/Licenses
PGS001358
(GBE_INI5116)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 3mm cylindrical power (R) eye measurement 148
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001358/ScoringFiles/PGS001358.txt.gz
PGS003321
(ExPRSweb_Insomnia_1160_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Insomnia insomnia 148
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003321/ScoringFiles/PGS003321.txt.gz
PGS000030
(PrCa)
 PGP000019 |
Schumacher FR et al. Nat Genet (2018)
 Prostate cancer prostate carcinoma 147
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000030/ScoringFiles/PGS000030.txt.gz
PGS000420
(PRSWEB_PHECODE172.1_D03_PT_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Melanomas of skin (diagnosis or history) melanoma 147
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000420/ScoringFiles/PGS000420.txt.gz
PGS002810
(GRS147_eGFR)
 PGP000390 |
Wuttke M et al. Nat Genet (2019)
 Estimated glomerular filtration rate glomerular filtration rate 147
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002810/ScoringFiles/PGS002810.txt.gz
PGS003320
(ExPRSweb_Insomnia_1160_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Insomnia insomnia 147
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003320/ScoringFiles/PGS003320.txt.gz
PGS000879
(PRS146_IOP)
 PGP000225 |
Qassim A et al. Ophthalmology (2020)
 Intraocular pressure intraocular pressure measurement 146
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000879/ScoringFiles/PGS000879.txt.gz
PGS001058
(GBE_BIN_FC20001468)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Cereal consumption (biscuit cereal) diet measurement 146
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001058/ScoringFiles/PGS001058.txt.gz
PGS001582
(GBE_INI25837)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Volume of grey matter in Paracingulate Gyrus (R) neuroimaging measurement,
grey matter volume measurement		 145
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001582/ScoringFiles/PGS001582.txt.gz
PGS000873
(SNP143)
 PGP000216 |
Brentnall AR et al. Int J Cancer (2019)
 Breast cancer breast carcinoma 143
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000873/ScoringFiles/PGS000873.txt.gz
PGS001082
(GBE_INI23028)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 MC VP1 antigen for Merkel Cell Polyomavirus blood protein amount 143
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001082/ScoringFiles/PGS001082.txt.gz
PGS003111
(ExPRSweb_T2D_29358691-GCST005413_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 143
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003111/ScoringFiles/PGS003111.txt.gz
PGS000659
(PRS-TG)
 PGP000121 |
Tam CHT et al. Genome Med (2021)
 Triglycerides triglyceride measurement 142
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000659/ScoringFiles/PGS000659.txt.gz
PGS001498
(GBE_INI25473)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Mean ISOVF in external capsule on FA skeleton (L) neuroimaging measurement,
brain volume		 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001498/ScoringFiles/PGS001498.txt.gz
PGS001878
(portability-PLR_717)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Polymyalgia rheumatica polymyalgia rheumatica 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001878/ScoringFiles/PGS001878.txt.gz
PGS005159
(GRS142_AF)
 PGP000709 |
Frederiksen TC et al. Heart (2024)
 Atrial fibrillation atrial fibrillation 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005159/ScoringFiles/PGS005159.txt.gz
PGS005171
(PRS142_AF)
 PGP000719 |
Dai L et al. Diabetes Metab Syndr (2024)
 Atrial fibrillation atrial fibrillation 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005171/ScoringFiles/PGS005171.txt.gz
PGS005231
(GRS142_CAD)
 PGP000738 |
Severance LM et al. JACC Cardiovasc Imaging (2021)
 Coronary artery disease coronary artery disorder 142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005231/ScoringFiles/PGS005231.txt.gz
PGS002252
(PRS_CRC)
 PGP000279 |
Archambault AN et al. J Natl Cancer Inst (2022)
 Colorectal cancer colorectal cancer 141
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002252/ScoringFiles/PGS002252.txt.gz
PGS012583
(PRS141_CRC)
 PGP000817 |
Tian Y et al. Br J Cancer (2024)
 Colorectal cancer colorectal cancer 141
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012583/ScoringFiles/PGS012583.txt.gz
PGS000759
(hypoT)
 PGP000164 |
Khan Z et al. Nat Commun (2021)
 Hypothyroidism hypothyroidism 140
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000759/ScoringFiles/PGS000759.txt.gz
PGS002265
(PRS140_CRC)
 PGP000294 |
Thomas M et al. Am J Hum Genet (2020)
 Colorectal cancer colorectal cancer 140
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002265/ScoringFiles/PGS002265.txt.gz
PGS003439
(PRSCC_140)
 PGP000441 |
Su YR et al. Cancer Epidemiol Biomarkers Prev (2023)
 Colorectal cancer colorectal cancer 140
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003439/ScoringFiles/PGS003439.txt.gz
PGS004295
(GenoBoost_breast_cancer_0)
 PGP000546 |
Ohta R et al. Nat Commun (2024)
 Breast cancer breast carcinoma 140
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004295/ScoringFiles/PGS004295.txt.gz
PGS001347
(GBE_FH1263)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Family history of Alzheimer's/dementia family history of Alzheimer’s disease 139
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001347/ScoringFiles/PGS001347.txt.gz
PGS004105
(pt_clump.auto.GCST004131.IBD)
 PGP000517 |
Monti R et al. Am J Hum Genet (2024)
 Inflammatory bowel disease (IBD) inflammatory bowel disease 139
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004105/ScoringFiles/PGS004105.txt.gz
PGS004223
(PRS139_T2D)
 PGP000523 |
Lin J et al. Sci Total Environ (2023)
 Type 2 diabetes type 2 diabetes mellitus 139
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004223/ScoringFiles/PGS004223.txt.gz
PGS000324
(GRS-JIA-ERA-20)
 PGP000052 |
Cánovas R et al. Ann Rheum Dis (2020)
 Enthesitis-related Juvenile Idiophatic Arthritis enthesitis-related juvenile idiopathic arthritis 138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000324/ScoringFiles/PGS000324.txt.gz
PGS000818
(GRS_Metabo)
 PGP000202 |
Bauer A et al. Genet Epidemiol (2021)
 Coronary heart disease coronary artery disorder 138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000818/ScoringFiles/PGS000818.txt.gz
PGS002799
(GRS138_EA)
 PGP000379 |
Shi Z et al. Eur Urol Open Sci (2022)
 Prostate cancer prostate carcinoma 138
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002799/ScoringFiles/PGS002799.txt.gz
PGS002838
(ExPRSweb_Alcohol_DrinksPerWeek_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Alcohol consumption alcohol consumption quality 137
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002838/ScoringFiles/PGS002838.txt.gz
PGS000810
(wGRS136_Allergy)
 PGP000195 |
Ferreira MA et al. Nat Genet (2017)
 Allergic disease (asthma, hay fever or eczema) allergic disease 136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000810/ScoringFiles/PGS000810.txt.gz
PGS001686
(GBE_INI25675)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 WA ICVF in tract uncinate fasciculus (L) neuroimaging measurement,
brain volume		 136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001686/ScoringFiles/PGS001686.txt.gz
PGS003398
(PRS-136EUR)
 PGP000415 |
Jee YH et al. Int J Epidemiol (2022)
 Breast cancer breast carcinoma 136
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003398/ScoringFiles/PGS003398.txt.gz
PGS003738
(PRS136_BC)
 PGP000470 |
Xin J et al. EBioMedicine (2023)
 Breast cancer breast carcinoma 136
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003738/ScoringFiles/PGS003738.txt.gz
PGS000780
(PRS135_allergy)
 PGP000184 |
Clark H et al. Clin Exp Allergy (2019)
 Allergic disease allergic disease 135
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000780/ScoringFiles/PGS000780.txt.gz
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