Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS002231
(portability-ldpred2_years_of_edu)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Qualifications (years of education) educational attainment 950,845
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002231/ScoringFiles/PGS002231.txt.gz
PGS003573
(cont-decay-years_of_edu)
 PGP000457 |
Ding Y et al. bioRxiv (2022)
|Pre		 Qualifications (years of education) educational attainment 979,739
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003573/ScoringFiles/PGS003573.txt.gz
PGS004496
(disease.R07.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 R07 (Pain in throat and chest) Chest pain 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004496/ScoringFiles/PGS004496.txt.gz
PGS004566
(meta.R07.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 R07 (Pain in throat and chest) Chest pain 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004566/ScoringFiles/PGS004566.txt.gz
PGS004497
(disease.R10.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 R10 (Abdominal and pelvic pain) Abdominal pain 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004497/ScoringFiles/PGS004497.txt.gz
PGS004567
(meta.R10.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 R10 (Abdominal and pelvic pain) Abdominal pain 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004567/ScoringFiles/PGS004567.txt.gz
PGS004498
(disease.R55.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 R55 (Syncope and collapse) Syncope 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004498/ScoringFiles/PGS004498.txt.gz
PGS004568
(meta.R55.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 R55 (Syncope and collapse) Syncope 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004568/ScoringFiles/PGS004568.txt.gz
PGS001258
(GBE_HC57)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Radius fracture radius fracture 365
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001258/ScoringFiles/PGS001258.txt.gz
PGS000664
(GRS7_GFR)
 PGP000124 |
Gorski M et al. Kidney Int (2020)
 Rapid decline of glomerular filtration rate (GFR) GFR change measurement 7
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000664/ScoringFiles/PGS000664.txt.gz
PGS001110
(GBE_HC1209)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Reactive arthropathies (time-to-event) reactive arthritis 6
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001110/ScoringFiles/PGS001110.txt.gz
PGS001899
(portability-PLR_depression_feelings)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Recent feelings of depression depressive symptom measurement 2,434
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001899/ScoringFiles/PGS001899.txt.gz
PGS002112
(portability-ldpred2_depression_feelings)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Recent feelings of depression depressive symptom measurement 748,601
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002112/ScoringFiles/PGS002112.txt.gz
PGS001920
(portability-PLR_foreboding_feelings)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Recent feelings of foreboding worry measurement 2,894
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001920/ScoringFiles/PGS001920.txt.gz
PGS002136
(portability-ldpred2_foreboding_feelings)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Recent feelings of foreboding worry measurement 733,839
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002136/ScoringFiles/PGS002136.txt.gz
PGS002098
(portability-ldpred2_abnormal_appetite)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Recent poor appetite or overeating eating disorder 764,146
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002098/ScoringFiles/PGS002098.txt.gz
PGS000279
(RAGE)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 Receptor for advanced glycosylation end products (RAGE) serum levels blood protein amount 552,298
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000279/ScoringFiles/PGS000279.txt.gz
PGS000110
(rbc)
 PGP000051 |
Xu Y et al. Cell Genom (2022)
 Red blood cell count erythrocyte count 23,242
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000110/ScoringFiles/PGS000110.txt.gz
PGS000187
(rbc)
 PGP000078 |
Vuckovic D et al. Cell (2020)
 Red blood cell count erythrocyte count 678
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000187/ScoringFiles/PGS000187.txt.gz
PGS001240
(GBE_INI30010)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Red blood cell count erythrocyte count 20,480
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001240/ScoringFiles/PGS001240.txt.gz
PGS002345
(blood_RED_COUNT.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002345/ScoringFiles/PGS002345.txt.gz
PGS002374
(blood_RED_COUNT.BOLT-LMM-BBJ)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 920,935
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002374/ScoringFiles/PGS002374.txt.gz
PGS002417
(blood_RED_COUNT.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 18,514
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002417/ScoringFiles/PGS002417.txt.gz
PGS002466
(blood_RED_COUNT.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 41,471
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002466/ScoringFiles/PGS002466.txt.gz
PGS002515
(blood_RED_COUNT.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 150,047
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002515/ScoringFiles/PGS002515.txt.gz
PGS002564
(blood_RED_COUNT.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 7,590
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002564/ScoringFiles/PGS002564.txt.gz
PGS002613
(blood_RED_COUNT.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 5,156
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002613/ScoringFiles/PGS002613.txt.gz
PGS002662
(blood_RED_COUNT.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 473,515
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002662/ScoringFiles/PGS002662.txt.gz
PGS002711
(blood_RED_COUNT.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell count erythrocyte count 982,902
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002711/ScoringFiles/PGS002711.txt.gz
PGS003478
(LDPred2_RBC)
 PGP000456 |
Zhang Y et al. EBioMedicine (2022)
 Red blood cell count erythrocyte count 860,281
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003478/ScoringFiles/PGS003478.txt.gz
PGS004821
(RBC_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Red blood cell count erythrocyte count 1,160,061
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004821/ScoringFiles/PGS004821.txt.gz
PGS004822
(RBC_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Red blood cell count erythrocyte count 1,874,761
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004822/ScoringFiles/PGS004822.txt.gz
PGS004823
(RBC_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Red blood cell count erythrocyte count 4,047,636
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004823/ScoringFiles/PGS004823.txt.gz
PGS004824
(RBC_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Red blood cell count erythrocyte count 1,542,933
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004824/ScoringFiles/PGS004824.txt.gz
PGS019805
(TPMI_RBC_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Red blood cell count erythrocyte count 5,567
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019805/ScoringFiles/PGS019805.txt.gz
PGS019829
(TPMI_RBC_LDPred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Red blood cell count erythrocyte count 65,395
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019829/ScoringFiles/PGS019829.txt.gz
PGS019853
(TPMI_RBC_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Red blood cell count erythrocyte count 983,749
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019853/ScoringFiles/PGS019853.txt.gz
PGS019877
(TPMI_RBC_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Red blood cell count erythrocyte count 1,020,768
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019877/ScoringFiles/PGS019877.txt.gz
PGS019901
(TPMI_RBC_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Red blood cell count erythrocyte count 400,175
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019901/ScoringFiles/PGS019901.txt.gz
PGS005195
(VPGS_RBC)
 PGP000723 |
Xiang R et al. Nat Commun (2025)
 Red blood cell count variance erythrocyte count 9,501,618
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005195/ScoringFiles/PGS005195.txt.gz
PGS001152
(GBE_INI30070)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Red blood cell distribution width Red cell distribution width 10,179
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001152/ScoringFiles/PGS001152.txt.gz
PGS002346
(blood_RBC_DISTRIB_WIDTH.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002346/ScoringFiles/PGS002346.txt.gz
PGS002418
(blood_RBC_DISTRIB_WIDTH.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 16,996
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002418/ScoringFiles/PGS002418.txt.gz
PGS002467
(blood_RBC_DISTRIB_WIDTH.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 36,619
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002467/ScoringFiles/PGS002467.txt.gz
PGS002516
(blood_RBC_DISTRIB_WIDTH.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 136,154
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002516/ScoringFiles/PGS002516.txt.gz
PGS002565
(blood_RBC_DISTRIB_WIDTH.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 7,740
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002565/ScoringFiles/PGS002565.txt.gz
PGS002614
(blood_RBC_DISTRIB_WIDTH.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 5,543
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002614/ScoringFiles/PGS002614.txt.gz
PGS002663
(blood_RBC_DISTRIB_WIDTH.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 340,172
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002663/ScoringFiles/PGS002663.txt.gz
PGS002712
(blood_RBC_DISTRIB_WIDTH.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Red blood cell distribution width Red cell distribution width 976,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002712/ScoringFiles/PGS002712.txt.gz
PGS001909
(portability-PLR_erythrocyte)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Red blood cell (erythrocyte) count erythrocyte count 81,887
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001909/ScoringFiles/PGS001909.txt.gz
Showing 5201 to 5250 of 6972 rows