Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS001514
(GBE_INI87)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Non-cancer illness year/age first occurred disease 273
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001514/ScoringFiles/PGS001514.txt.gz
PGS002782
(GLGC_2021_ALL_nonHDL_PRS_weights_PRS-CS)
 PGP000366 |
Kanoni S et al. Genome Biol (2022)
 nonHDL Cholesterol non-high density lipoprotein cholesterol measurement 1,239,184
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002782/ScoringFiles/PGS002782.txt.gz
PGS000080
(CC_NHL)
 PGP000050 |
Graff RE et al. Nat Commun (2021)
 Non-Hodgkin's lymphoma non-Hodgkin lymphoma 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000080/ScoringFiles/PGS000080.txt.gz
PGS000641
(PRSWEB_PHECODE202.2_GWAS-Catalog-r2019-05-03-X202.2_P_5e-08_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Non-Hodgkin's lymphoma non-Hodgkin lymphoma 12
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000641/ScoringFiles/PGS000641.txt.gz
PGS000642
(PRSWEB_PHECODE202.2_GWAS-Catalog-r2019-05-03-X202.2_PT_UKB_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Non-Hodgkin's lymphoma non-Hodgkin lymphoma 10
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000642/ScoringFiles/PGS000642.txt.gz
PGS000791
(CC_NHL_IV)
 PGP000186 |
Kachuri L et al. Nat Commun (2020)
 Non-Hodgkin's lymphoma non-Hodgkin lymphoma 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000791/ScoringFiles/PGS000791.txt.gz
PGS004248
(PRS20_nhl)
 PGP000542 |
Kim ES et al. NPJ Precis Oncol (2023)
 Non-Hodgkin's lymphoma non-Hodgkin lymphoma 20
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004248/ScoringFiles/PGS004248.txt.gz
PGS019557
(TPMI_619.1_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 116,971
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019557/ScoringFiles/PGS019557.txt.gz
PGS019558
(TPMI_619.1_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 939,822
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019558/ScoringFiles/PGS019558.txt.gz
PGS019559
(TPMI_619.1_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 28,397
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019559/ScoringFiles/PGS019559.txt.gz
PGS019560
(TPMI_619.1_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 983,772
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019560/ScoringFiles/PGS019560.txt.gz
PGS019561
(TPMI_619.1_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Noninflammatory disorders of ovary fallopian tube and broad ligament ovarian disorder 1,000,442
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019561/ScoringFiles/PGS019561.txt.gz
PGS001294
(GBE_HC649)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Non-insulin-dependent diabetes (time-to-event) type 2 diabetes mellitus 3,496
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001294/ScoringFiles/PGS001294.txt.gz
PGS001040
(GBE_cancer1060)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Non melanoma skin cancer non-melanoma skin carcinoma 1,610
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001040/ScoringFiles/PGS001040.txt.gz
PGS005086
(PGS64518_OC)
 PGP000680 |
Barnes DR et al. NPJ Genom Med (2025)
 Non-mucinous epithelial ovarian cancer ovarian carcinoma 64,518
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005086/ScoringFiles/PGS005086.txt.gz
PGS005087
(PGS5957_OC)
 PGP000680 |
Barnes DR et al. NPJ Genom Med (2025)
 Non-mucinous epithelial ovarian cancer ovarian carcinoma 5,957
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005087/ScoringFiles/PGS005087.txt.gz
PGS005088
(PGS3448_OC)
 PGP000680 |
Barnes DR et al. NPJ Genom Med (2025)
 Non-mucinous epithelial ovarian cancer ovarian carcinoma 3,448
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005088/ScoringFiles/PGS005088.txt.gz
PGS005089
(PGS400_OC)
 PGP000680 |
Barnes DR et al. NPJ Genom Med (2025)
 Non-mucinous epithelial ovarian cancer ovarian carcinoma 400
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005089/ScoringFiles/PGS005089.txt.gz
PGS003754
(PRS22_OCstepwise)
 PGP000474 |
Hurwitz LM et al. JAMA Netw Open (2023)
 Nonmucinous Epithelial Ovarian Cancer ovarian carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003754/ScoringFiles/PGS003754.txt.gz
PGS001025
(GBE_HC951)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Nonrheumatic aortic valve disorders (time-to-event) aortic valve disorder 36
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001025/ScoringFiles/PGS001025.txt.gz
PGS019752
(TPMI_790_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nonspecific findings on examination of blood abnormal result of function studies 223,270
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019752/ScoringFiles/PGS019752.txt.gz
PGS019753
(TPMI_790_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nonspecific findings on examination of blood abnormal result of function studies 939,891
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019753/ScoringFiles/PGS019753.txt.gz
PGS019754
(TPMI_790_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nonspecific findings on examination of blood abnormal result of function studies 18,474
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019754/ScoringFiles/PGS019754.txt.gz
PGS019755
(TPMI_790_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nonspecific findings on examination of blood abnormal result of function studies 983,826
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019755/ScoringFiles/PGS019755.txt.gz
PGS019756
(TPMI_790_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nonspecific findings on examination of blood abnormal result of function studies 959,344
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019756/ScoringFiles/PGS019756.txt.gz
PGS002266
(PRS_29)
 PGP000295 |
Yu Y et al. Hum Mol Genet (2022)
 Nonsyndromic cleft lip with or without cleft palate cleft lip,
Cleft palate		 29
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002266/ScoringFiles/PGS002266.txt.gz
PGS001814
(portability-PLR_241.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Nontoxic multinodular goiter multinodular goiter,
nontoxic goiter		 322
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001814/ScoringFiles/PGS001814.txt.gz
PGS002022
(portability-ldpred2_241.2)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Nontoxic multinodular goiter multinodular goiter,
nontoxic goiter		 375,470
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002022/ScoringFiles/PGS002022.txt.gz
PGS018660
(TPMI_241.2_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic multinodular goiter nontoxic goiter 610
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018660/ScoringFiles/PGS018660.txt.gz
PGS018661
(TPMI_241.2_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic multinodular goiter nontoxic goiter 275,929
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018661/ScoringFiles/PGS018661.txt.gz
PGS018662
(TPMI_241.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic multinodular goiter nontoxic goiter 45,575
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018662/ScoringFiles/PGS018662.txt.gz
PGS018663
(TPMI_241.2_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic multinodular goiter nontoxic goiter 983,819
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018663/ScoringFiles/PGS018663.txt.gz
PGS018664
(TPMI_241.2_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic multinodular goiter nontoxic goiter 142,675
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018664/ScoringFiles/PGS018664.txt.gz
PGS018650
(TPMI_241_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic nodular goiter toxic multinodular goitre 2,717
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018650/ScoringFiles/PGS018650.txt.gz
PGS018651
(TPMI_241_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic nodular goiter toxic multinodular goitre 939,876
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018651/ScoringFiles/PGS018651.txt.gz
PGS018652
(TPMI_241_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic nodular goiter toxic multinodular goitre 457,716
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018652/ScoringFiles/PGS018652.txt.gz
PGS018653
(TPMI_241_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic nodular goiter toxic multinodular goitre 983,821
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018653/ScoringFiles/PGS018653.txt.gz
PGS018654
(TPMI_241_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic nodular goiter toxic multinodular goitre 94,850
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018654/ScoringFiles/PGS018654.txt.gz
PGS018655
(TPMI_241.1_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic uninodular goiter nontoxic goiter 327
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018655/ScoringFiles/PGS018655.txt.gz
PGS018656
(TPMI_241.1_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic uninodular goiter nontoxic goiter 215,680
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018656/ScoringFiles/PGS018656.txt.gz
PGS018657
(TPMI_241.1_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic uninodular goiter nontoxic goiter 561,432
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018657/ScoringFiles/PGS018657.txt.gz
PGS018658
(TPMI_241.1_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic uninodular goiter nontoxic goiter 983,778
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018658/ScoringFiles/PGS018658.txt.gz
PGS018659
(TPMI_241.1_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Nontoxic uninodular goiter nontoxic goiter 1,006,150
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018659/ScoringFiles/PGS018659.txt.gz
PGS001048
(GBE_HC1576)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 NSTEMI (algorithmically-defined) Non-ST Elevation Myocardial Infarction 687
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001048/ScoringFiles/PGS001048.txt.gz
PGS000270
(NT-pro_BNP)
 PGP000089 |
Folkersen L et al. Nat Metab (2020)
 N-terminal prohormone brain natriuretic peptide (NT-pro_BNP) serum levels blood protein amount 554,137
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000270/ScoringFiles/PGS000270.txt.gz
PGS002309
(repro_NumberChildrenEverBorn_Pooled.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Number of children ever born number of children ever born measurement 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002309/ScoringFiles/PGS002309.txt.gz
PGS002381
(repro_NumberChildrenEverBorn_Pooled.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Number of children ever born number of children ever born measurement 1,639
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002381/ScoringFiles/PGS002381.txt.gz
PGS002430
(repro_NumberChildrenEverBorn_Pooled.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Number of children ever born number of children ever born measurement 11,512
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002430/ScoringFiles/PGS002430.txt.gz
PGS002479
(repro_NumberChildrenEverBorn_Pooled.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Number of children ever born number of children ever born measurement 89,453
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002479/ScoringFiles/PGS002479.txt.gz
PGS002528
(repro_NumberChildrenEverBorn_Pooled.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Number of children ever born number of children ever born measurement 66
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002528/ScoringFiles/PGS002528.txt.gz
Showing 4451 to 4500 of 6982 rows