Trait: hippocampal tail volume

Experimental Factor Ontology (EFO) Information
Identifier EFO_0009398
Description Volume of hippocampal tail.
Trait category
Other measurement

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003651
(L_hippocampal_tail_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left hippocampal tail volume hippocampal tail volume 324
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003651/ScoringFiles/PGS003651.txt.gz
PGS003652
(R_hippocampal_tail_trans_ancestry_meta_analysis)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal tail volume hippocampal tail volume 25
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003652/ScoringFiles/PGS003652.txt.gz
PGS003653
(L_hippocampal_tail_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left hippocampal tail volume hippocampal tail volume 19
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003653/ScoringFiles/PGS003653.txt.gz
PGS003654
(R_hippocampal_tail_UKBB_EUR_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal tail volume hippocampal tail volume 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003654/ScoringFiles/PGS003654.txt.gz
PGS003655
(L_hippocampal_tail_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Left hippocampal tail volume hippocampal tail volume 27,952
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003655/ScoringFiles/PGS003655.txt.gz
PGS003656
(R_hippocampal_tail_CHIMGEN_EAS_GWAS)
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Right hippocampal tail volume hippocampal tail volume 6,924
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003656/ScoringFiles/PGS003656.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		Evaluated Score PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM018287 PGS003651
(L_hippocampal_tail_trans_ancestry_meta_analysis)
 PSS010958|
East Asian Ancestry|
1,999 individuals
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Reported Trait: Left hippocampal tail volume — — R²: 0.02344 sex, age, age2, age × sex, total intracranial volume, and top six genetic principal components —
PPM018308 PGS003652
(R_hippocampal_tail_trans_ancestry_meta_analysis)
 PSS010958|
East Asian Ancestry|
1,999 individuals
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Reported Trait: Right hippocampal tail volume — — R²: 0.01353 sex, age, age2, age × sex, total intracranial volume, and top six genetic principal components —
PPM018331 PGS003653
(L_hippocampal_tail_UKBB_EUR_GWAS)
 PSS010958|
East Asian Ancestry|
1,999 individuals
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Reported Trait: Left hippocampal tail volume — — R²: 0.00932 sex, age, age2, age × sex, total intracranial volume, and top six genetic principal components —
PPM018352 PGS003654
(R_hippocampal_tail_UKBB_EUR_GWAS)
 PSS010958|
East Asian Ancestry|
1,999 individuals
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Reported Trait: Right hippocampal tail volume — — R²: 0.01362 sex, age, age2, age × sex, total intracranial volume, and top six genetic principal components —
PPM018375 PGS003655
(L_hippocampal_tail_CHIMGEN_EAS_GWAS)
 PSS010958|
East Asian Ancestry|
1,999 individuals
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Reported Trait: Left hippocampal tail volume — — R²: 0.00396 sex, age, age2, age × sex, total intracranial volume, and top six genetic principal components —
PPM018396 PGS003656
(R_hippocampal_tail_CHIMGEN_EAS_GWAS)
 PSS010958|
East Asian Ancestry|
1,999 individuals
 PGP000464 |
Liu N et al. Nat Genet (2023)
 Reported Trait: Right hippocampal tail volume — — R²: 0.01042 sex, age, age2, age × sex, total intracranial volume, and top six genetic principal components —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS010958 — — 1,999 individuals — East Asian — CHIMGEN —