Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0003913 |
Description |
|
Trait category |
Other trait
|
Synonyms |
4 synonyms
|
Mapped term(s) |
7 mapped terms
|
Polygenic Score (PGS) ID | PGS Name | PGS Publication (PGP) ID | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants | PGS Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS000703 | HC132 | PGP000128 Sinnott-Armstrong N et al. Nat Genet (2021) | Angina | angina pectoris | 183,692 | http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000703/ScoringFiles/PGS000703.txt.gz |
PGS Performance Metric ID (PPM ID) |
Evaluated Score |
PGS Sample Set ID (PSS ID) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
PGS Classification Metrics | Other Metrics | Covariates Included in the Model | PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM001595 | PGS000703 (HC132) |
PSS000794 | PGP000128 Sinnott-Armstrong N et al. (2021) | Reported Trait: Angina | — | AUROC: 0.59262 | — | Age, sex, PCs(1-10) | — |
PGS Sample Set ID (PSS ID) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS000794 | — | — | 87,413 individuals | — | European | — | UKB | — |