Polygenic Scores (PGS)

Polygenic Score (PGS) ID PGS Name PGS Publication (PGP) ID Reported Trait Mapped Trait(s) (Ontology) Number of Variants PGS Scoring File (FTP Link)
PGS000001 PRS77_BC PGP000001
Mavaddat N et al. J Natl Cancer Inst (2015)
Breast Cancer breast carcinoma 77 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000001/ScoringFiles/PGS000001.txt.gz
PGS000002 PRS77_ERpos PGP000001
Mavaddat N et al. J Natl Cancer Inst (2015)
ER-positive Breast Cancer estrogen-receptor positive breast cancer 77 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000002/ScoringFiles/PGS000002.txt.gz
PGS000003 PRS77_ERneg PGP000001
Mavaddat N et al. J Natl Cancer Inst (2015)
ER-negative Breast Cancer estrogen-receptor negative breast cancer 77 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000003/ScoringFiles/PGS000003.txt.gz
PGS000004 PRS313_BC PGP000002
Mavaddat N et al. Am J Hum Genet (2018)
Breast Cancer breast carcinoma 313 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000004/ScoringFiles/PGS000004.txt.gz
PGS000005 PRS313_ERpos PGP000002
Mavaddat N et al. Am J Hum Genet (2018)
ER-positive Breast Cancer estrogen-receptor positive breast cancer 313 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000005/ScoringFiles/PGS000005.txt.gz
PGS000006 PRS313_ERneg PGP000002
Mavaddat N et al. Am J Hum Genet (2018)
ER-negative Breast Cancer estrogen-receptor negative breast cancer 313 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000006/ScoringFiles/PGS000006.txt.gz
PGS000007 PRS3820_BC PGP000002
Mavaddat N et al. Am J Hum Genet (2018)
Breast Cancer breast carcinoma 3,820 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000007/ScoringFiles/PGS000007.txt.gz
PGS000008 PRS3820_ERpos PGP000002
Mavaddat N et al. Am J Hum Genet (2018)
ER-positive Breast Cancer estrogen-receptor positive breast cancer 3,820 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000008/ScoringFiles/PGS000008.txt.gz
PGS000009 PRS3820_ERneg PGP000002
Mavaddat N et al. Am J Hum Genet (2018)
ER-negative Breast Cancer estrogen-receptor negative breast cancer 3,820 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000009/ScoringFiles/PGS000009.txt.gz
PGS000010 GRS27 PGP000003
Mega JL et al. Lancet (2015)
Coronary heart disease coronary heart disease 27 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000010/ScoringFiles/PGS000010.txt.gz
PGS000011 GRS50 PGP000004
Tada H et al. Eur Heart J (2015)
Coronary artery disease coronary artery disease 50 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000011/ScoringFiles/PGS000011.txt.gz
PGS000012 GRS49K PGP000005
Abraham G et al. Eur Heart J (2016)
Coronary artery disease coronary artery disease 49,310 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000012/ScoringFiles/PGS000012.txt.gz
PGS000013 GPS_CAD PGP000006
Khera AV et al. Nat Genet (2018)
Coronary artery disease coronary artery disease 6,630,150 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000013/ScoringFiles/PGS000013.txt.gz
PGS000014 GPS_T2D PGP000006
Khera AV et al. Nat Genet (2018)
Type 2 diabetes type II diabetes mellitus 6,917,436 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000014/ScoringFiles/PGS000014.txt.gz
PGS000015 GPS_BC PGP000006
Khera AV et al. Nat Genet (2018)
Breast cancer breast carcinoma 5,218 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000015/ScoringFiles/PGS000015.txt.gz
PGS000016 GPS_AF PGP000006
Khera AV et al. Nat Genet (2018)
Atrial fibrillation atrial fibrillation 6,730,541 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000016/ScoringFiles/PGS000016.txt.gz
PGS000017 GPS_IBD PGP000006
Khera AV et al. Nat Genet (2018)
Inflammatory bowel disease inflammatory bowel disease 6,907,112 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000017/ScoringFiles/PGS000017.txt.gz
PGS000018 metaGRS_CAD PGP000007
Inouye M et al. J Am Coll Cardiol (2018)
Coronary artery disease coronary artery disease 1,745,180 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000018/ScoringFiles/PGS000018.txt.gz
PGS000019 GRS_CAD PGP000009
Paquette M et al. J Clin Lipidol (2017)
Coronary artery disease coronary artery disease 192 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000019/ScoringFiles/PGS000019.txt.gz
PGS000020 dGRS1000 PGP000010
Läll K et al. Genet Med (2016)
Type 2 diabetes type II diabetes mellitus 7,502 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000020/ScoringFiles/PGS000020.txt.gz
PGS000021 GRS1 PGP000011
Oram RA et al. Diabetes Care (2015)
Type 1 diabetes type I diabetes mellitus 30 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000021/ScoringFiles/PGS000021.txt.gz
PGS000022 T1D_GRS PGP000012
Perry DJ et al. Sci Rep (2018)
Type 1 diabetes type I diabetes mellitus 37 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000022/ScoringFiles/PGS000022.txt.gz
PGS000023 AA_GRS PGP000013
Onengut-Gumuscu S et al. Diabetes Care (2019)
Type 1 diabetes type I diabetes mellitus 7 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000023/ScoringFiles/PGS000023.txt.gz
PGS000024 GRS2 PGP000014
Sharp SA et al. Diabetes Care (2019)
Type 1 diabetes type I diabetes mellitus 67 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000024/ScoringFiles/PGS000024.txt.gz
PGS000025 GRS PGP000015
Chouraki V et al. J Alzheimers Dis (2016)
Alzheimer's Disease Alzheimer's disease 19 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000025/ScoringFiles/PGS000025.txt.gz
PGS000026 PHS PGP000016
Desikan RS et al. PLoS Med (2017)
Alzheimer’s Disease Alzheimer's disease 31 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000026/ScoringFiles/PGS000026.txt.gz
PGS000027 GPS_BMI PGP000017
Khera AV et al. Cell (2019)
Body Mass Index body mass index 2,100,302 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000027/ScoringFiles/PGS000027.txt.gz
PGS000028 PRS PGP000018
Shieh Y et al. Breast Cancer Res Treat (2016)
Breast cancer breast carcinoma 83 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000028/ScoringFiles/PGS000028.txt.gz
PGS000029 PRS_AS PGP000018
Shieh Y et al. Breast Cancer Res Treat (2016)
Breast cancer breast carcinoma 76 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000029/ScoringFiles/PGS000029.txt.gz
PGS000030 PrCa PGP000019
Schumacher FR et al. Nat Genet (2018)
Prostate cancer prostate carcinoma 147 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000030/ScoringFiles/PGS000030.txt.gz
PGS000031 GRSt PGP000020
Vassy JL et al. Diabetes (2014)
Type 2 diabetes type II diabetes mellitus 62 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000031/ScoringFiles/PGS000031.txt.gz
PGS000032 GRSB PGP000020
Vassy JL et al. Diabetes (2014)
Type 2 diabetes (based on SNPs involved in β-cell function) type II diabetes mellitus 20 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000032/ScoringFiles/PGS000032.txt.gz
PGS000033 GRSIR PGP000020
Vassy JL et al. Diabetes (2014)
Type 2 diabetes (based on SNPs involved in insulin resistance) type II diabetes mellitus 10 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000033/ScoringFiles/PGS000033.txt.gz
PGS000034 GRS_BMI PGP000021
Song M et al. Diabetes (2017)
Adult Body Mass Index body mass index 97 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000034/ScoringFiles/PGS000034.txt.gz
PGS000035 PRS_AF PGP000022
Weng LC et al. Circulation (2017)
Atrial fibrillation atrial fibrillation 1,168 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000035/ScoringFiles/PGS000035.txt.gz
PGS000036 gePS_T2D PGP000023
Mahajan A et al. Nat Genet (2018)
Type 2 diabetes type II diabetes mellitus 171,249 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000036/ScoringFiles/PGS000036.txt.gz
PGS000037 PGS_AST PGP000025
Belsky DW et al. Lancet Respir Med (2013)
Asthma asthma 15 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000037/ScoringFiles/PGS000037.txt.gz
PGS000038 PRS90 PGP000026
Rutten-Jacobs LC et al. BMJ (2018)
Stroke stroke 90 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000038/ScoringFiles/PGS000038.txt.gz
PGS000039 metaGRS_ischaemicstroke PGP000027
Abraham G et al. Nat Commun (2019)
Ischaemic stroke stroke 3,225,583 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000039/ScoringFiles/PGS000039.txt.gz
PGS000040 GRS_CeD PGP000028
Abraham G et al. PLoS Genet (2014)
Coeliac disease celiac disease 228 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000040/ScoringFiles/PGS000040.txt.gz
PGS000041 GRS-DQ2.5-CeD PGP000029
Abraham G et al. Genome Med (2015)
Coeliac disease celiac disease 2,513 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000041/ScoringFiles/PGS000041.txt.gz
PGS000042 GRS-DQ2.5-CeD-imputed PGP000029
Abraham G et al. Genome Med (2015)
Coeliac disease celiac disease 3,317 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000042/ScoringFiles/PGS000042.txt.gz
PGS000043 PRS_VTE PGP000030
Klarin D et al. Nat Genet (2019)
Venous thromboembolism venous thromboembolism 297 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000043/ScoringFiles/PGS000043.txt.gz
PGS000044 PrCa66 PGP000031
Pashayan N et al. Br J Cancer (2015)
Prostate cancer prostate carcinoma 66 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000044/ScoringFiles/PGS000044.txt.gz
PGS000045 BCPRS_Overall PGP000033
Kuchenbaecker KB et al. J Natl Cancer Inst (2017)
Breast cancer breast carcinoma 88 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000045/ScoringFiles/PGS000045.txt.gz
PGS000046 BCPRS_ER+ PGP000033
Kuchenbaecker KB et al. J Natl Cancer Inst (2017)
Estrogen receptor [ER]-positive breast cancer estrogen-receptor positive breast cancer 87 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000046/ScoringFiles/PGS000046.txt.gz
PGS000047 BCPRS_ER- PGP000033
Kuchenbaecker KB et al. J Natl Cancer Inst (2017)
Estrogen receptor [ER]-negative breast cancer estrogen-receptor negative breast cancer 53 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000047/ScoringFiles/PGS000047.txt.gz
PGS000048 OCPRS_Overall PGP000033
Kuchenbaecker KB et al. J Natl Cancer Inst (2017)
Ovarian cancer ovarian carcinoma 17 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000048/ScoringFiles/PGS000048.txt.gz
PGS000049 PRS103_PrCa PGP000034
Lecarpentier J et al. J Clin Oncol (2017)
Prostate Cancer prostate carcinoma 103 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000049/ScoringFiles/PGS000049.txt.gz
PGS000050 PRS44 PGP000035
Wen W et al. Breast Cancer Res (2016)
Breast cancer breast carcinoma 44 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000050/ScoringFiles/PGS000050.txt.gz
PGS000051 PRS67 PGP000036
Zhang X et al. PLoS Med (2018)
Breast Cancer breast carcinoma 67 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000051/ScoringFiles/PGS000051.txt.gz
PGS000052 sPRS161 PGP000037
Lakeman IMM et al. J Med Genet (2019)
Breast cancer breast carcinoma 161 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000052/ScoringFiles/PGS000052.txt.gz
PGS000053 ALZ21_NIA-LOAD PGP000039
Tosto G et al. Neurology (2017)
Alzheimer's disease (late onset) late-onset Alzheimers disease 21 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000053/ScoringFiles/PGS000053.txt.gz
PGS000054 ALZ21_EFIGA PGP000039
Tosto G et al. Neurology (2017)
Alzheimer's disease (late onset) late-onset Alzheimers disease 21 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000054/ScoringFiles/PGS000054.txt.gz
PGS000055 PRS_CRC PGP000040
Schmit SL et al. J Natl Cancer Inst (2019)
Colorectal cancer colorectal cancer 76 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000055/ScoringFiles/PGS000055.txt.gz
PGS000056 PD_PRS PGP000041
Paul KC et al. JAMA Neurol (2018)
Parkinson Disease Parkinson's disease 23 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000056/ScoringFiles/PGS000056.txt.gz
PGS000057 CHD57 PGP000042
Natarajan P et al. Circulation (2017)
Coronary heart disease coronary heart disease 57 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000057/ScoringFiles/PGS000057.txt.gz
PGS000058 CAD_GRS_204 PGP000043
Morieri ML et al. Diabetes Care (2018)
Coronary artery disease coronary artery disease 204 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000058/ScoringFiles/PGS000058.txt.gz
PGS000059 CHD46 PGP000044
Hajek C et al. Circ Genom Precis Med (2018)
Coronary heart disease coronary heart disease 46 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000059/ScoringFiles/PGS000059.txt.gz
PGS000060 GRS_HDL PGP000045
Johnson L et al. PLoS One (2015)
high-density lipoprotein (HDL) cholesterol high density lipoprotein cholesterol measurement 46 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000060/ScoringFiles/PGS000060.txt.gz
PGS000061 GRS_LDL PGP000045
Johnson L et al. PLoS One (2015)
low-density lipoprotein (LDL) cholesterol low density lipoprotein cholesterol measurement 37 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000061/ScoringFiles/PGS000061.txt.gz
PGS000062 GRS_TC PGP000045
Johnson L et al. PLoS One (2015)
total cholesterol total cholesterol measurement 52 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000062/ScoringFiles/PGS000062.txt.gz
PGS000063 GRS_TG PGP000045
Johnson L et al. PLoS One (2015)
triglycerides triglyceride measurement 32 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000063/ScoringFiles/PGS000063.txt.gz
PGS000064 GLGC2017_HDL PGP000046
Kuchenbaecker K et al. Nat Commun (2019)
High density lipoprotein (HDL) cholesterol high density lipoprotein cholesterol measurement 120 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000064/ScoringFiles/PGS000064.txt.gz
PGS000065 GLGC2017_LDL PGP000046
Kuchenbaecker K et al. Nat Commun (2019)
Low density lipoprotein (HDL) cholesterol low density lipoprotein cholesterol measurement 103 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000065/ScoringFiles/PGS000065.txt.gz
PGS000066 GLGC2017_TG PGP000046
Kuchenbaecker K et al. Nat Commun (2019)
Triglycerides (TG) triglyceride measurement 101 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000066/ScoringFiles/PGS000066.txt.gz
PGS000067 PCa_PHS PGP000047
Seibert TM et al. BMJ (2018)
Prostate cancer prostate carcinoma 54 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000067/ScoringFiles/PGS000067.txt.gz
PGS000068 PRS_EOC PGP000048
Yang X et al. J Med Genet (2018)
Epithelial ovarian cancer ovarian carcinoma 15 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000068/ScoringFiles/PGS000068.txt.gz
PGS000069 PRS_sEOC PGP000048
Yang X et al. J Med Genet (2018)
Serous epithelial ovarian cancer ovarian serous carcinoma 15 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000069/ScoringFiles/PGS000069.txt.gz
PGS000070 PRS_LC_C PGP000049
Dai J et al. Lancet Respir Med (2019)
Lung cancer lung adenocarcinoma 19 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000070/ScoringFiles/PGS000070.txt.gz
PGS000071 CC_Bladder PGP000050
Graff RE et al. bioRxiv (2020)
Bladder cancer bladder carcinoma 15 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000071/ScoringFiles/PGS000071.txt.gz
PGS000072 CC_Breast PGP000050
Graff RE et al. bioRxiv (2020)
Breast cancer breast carcinoma 187 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000072/ScoringFiles/PGS000072.txt.gz
PGS000073 CC_Cervix PGP000050
Graff RE et al. bioRxiv (2020)
Cervical cancer cervical carcinoma 10 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000073/ScoringFiles/PGS000073.txt.gz
PGS000074 CC_Colorectal PGP000050
Graff RE et al. bioRxiv (2020)
Colorectal cancer colorectal cancer 103 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000074/ScoringFiles/PGS000074.txt.gz
PGS000075 CC_Endo PGP000050
Graff RE et al. bioRxiv (2020)
Endometrial cancer endometrial carcinoma 9 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000075/ScoringFiles/PGS000075.txt.gz
PGS000076 CC_Kidney PGP000050
Graff RE et al. bioRxiv (2020)
Kidney cancer renal cell carcinoma 19 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000076/ScoringFiles/PGS000076.txt.gz
PGS000077 CC_LL PGP000050
Graff RE et al. bioRxiv (2020)
Lymphocytic leukemia lymphoid leukemia 75 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000077/ScoringFiles/PGS000077.txt.gz
PGS000078 CC_Lung PGP000050
Graff RE et al. bioRxiv (2020)
Lung cancer lung carcinoma 109 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000078/ScoringFiles/PGS000078.txt.gz
PGS000079 CC_Melanoma PGP000050
Graff RE et al. bioRxiv (2020)
Melanoma melanoma 24 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000079/ScoringFiles/PGS000079.txt.gz
PGS000080 CC_NHL PGP000050
Graff RE et al. bioRxiv (2020)
Non-Hodgkin's lymphoma non-Hodgkins lymphoma 19 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000080/ScoringFiles/PGS000080.txt.gz
PGS000081 CC_Oral PGP000050
Graff RE et al. bioRxiv (2020)
Oral cavity and pharyngeal cancers carcinoma of pharynx
oral cavity cancer
14 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000081/ScoringFiles/PGS000081.txt.gz
PGS000082 CC_Ovary PGP000050
Graff RE et al. bioRxiv (2020)
Ovarian cancer ovarian carcinoma 36 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000082/ScoringFiles/PGS000082.txt.gz
PGS000083 CC_Pancreas PGP000050
Graff RE et al. bioRxiv (2020)
Pancreatic cancer pancreatic carcinoma 22 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000083/ScoringFiles/PGS000083.txt.gz
PGS000084 CC_Prostate PGP000050
Graff RE et al. bioRxiv (2020)
Prostate cancer prostate carcinoma 161 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000084/ScoringFiles/PGS000084.txt.gz
PGS000085 CC_Stomach PGP000050
Graff RE et al. bioRxiv (2020)
Esophageal and stomach cancers gastric carcinoma
Barrett's esophagus
13 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000085/ScoringFiles/PGS000085.txt.gz
PGS000086 CC_Testis PGP000050
Graff RE et al. bioRxiv (2020)
Testicular cancer testicular carcinoma
Testicular Germ Cell Tumor
52 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000086/ScoringFiles/PGS000086.txt.gz
PGS000087 CC_Thyroid PGP000050
Graff RE et al. bioRxiv (2020)
Thyroid cancer thyroid carcinoma 12 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000087/ScoringFiles/PGS000087.txt.gz
PGS000088 baso PGP000051
Xu Y et al. bioRxiv (2020)
Basophil count basophil count 198 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000088/ScoringFiles/PGS000088.txt.gz
PGS000089 baso_p PGP000051
Xu Y et al. bioRxiv (2020)
Basophil percentage of white cells basophil percentage of leukocytes 160 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000089/ScoringFiles/PGS000089.txt.gz
PGS000090 eo PGP000051
Xu Y et al. bioRxiv (2020)
Eosinophil count eosinophil count 623 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000090/ScoringFiles/PGS000090.txt.gz
PGS000091 eo_p PGP000051
Xu Y et al. bioRxiv (2020)
Eosinophil percentage of white cells eosinophil percentage of leukocytes 589 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000091/ScoringFiles/PGS000091.txt.gz
PGS000092 hct PGP000051
Xu Y et al. bioRxiv (2020)
Hematocrit hematocrit 513 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000092/ScoringFiles/PGS000092.txt.gz
PGS000093 hgb PGP000051
Xu Y et al. bioRxiv (2020)
Hemoglobin concentration hemoglobin measurement 532 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000093/ScoringFiles/PGS000093.txt.gz
PGS000094 hlr PGP000051
Xu Y et al. bioRxiv (2020)
High light scatter reticulocyte count reticulocyte count 605 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000094/ScoringFiles/PGS000094.txt.gz
PGS000095 hlr_p PGP000051
Xu Y et al. bioRxiv (2020)
High light scatter reticulocyte percentage of red cells reticulocyte count 594 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000095/ScoringFiles/PGS000095.txt.gz
PGS000096 irf PGP000051
Xu Y et al. bioRxiv (2020)
Immature fraction of reticulocytes reticulocyte count 390 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000096/ScoringFiles/PGS000096.txt.gz
PGS000097 lymph PGP000051
Xu Y et al. bioRxiv (2020)
Lymphocyte count lymphocyte count 639 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000097/ScoringFiles/PGS000097.txt.gz
PGS000098 lymph_p PGP000051
Xu Y et al. bioRxiv (2020)
Lymphocyte percentage of white cells lymphocyte percentage of leukocytes 489 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000098/ScoringFiles/PGS000098.txt.gz
PGS000099 mch PGP000051
Xu Y et al. bioRxiv (2020)
Mean corpuscular hemoglobin mean corpuscular hemoglobin 682 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000099/ScoringFiles/PGS000099.txt.gz
PGS000100 mchc PGP000051
Xu Y et al. bioRxiv (2020)
Mean corpuscular hemoglobin concentration mean corpuscular hemoglobin concentration 252 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000100/ScoringFiles/PGS000100.txt.gz
PGS000101 mcv PGP000051
Xu Y et al. bioRxiv (2020)
Mean corpuscular volume mean corpuscular volume 739 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000101/ScoringFiles/PGS000101.txt.gz
PGS000102 mono PGP000051
Xu Y et al. bioRxiv (2020)
Monocyte count monocyte count 674 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000102/ScoringFiles/PGS000102.txt.gz
PGS000103 mono_p PGP000051
Xu Y et al. bioRxiv (2020)
Monocyte percentage of white cells monocyte percentage of leukocytes 583 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000103/ScoringFiles/PGS000103.txt.gz
PGS000104 mpv PGP000051
Xu Y et al. bioRxiv (2020)
Mean platelet volume mean platelet volume 681 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000104/ScoringFiles/PGS000104.txt.gz
PGS000135 SCZ_MTS PGP000065
Zheutlin AB et al. Am J Psychiatry (2019)
Schizophrenia schizophrenia 972,439 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000135/ScoringFiles/PGS000135.txt.gz
PGS000105 neut PGP000051
Xu Y et al. bioRxiv (2020)
Neutrophil count neutrophil count 512 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000105/ScoringFiles/PGS000105.txt.gz
PGS000106 neut_p PGP000051
Xu Y et al. bioRxiv (2020)
Neutrophil percentage of white cells neutrophil percentage of leukocytes 452 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000106/ScoringFiles/PGS000106.txt.gz
PGS000107 pct PGP000051
Xu Y et al. bioRxiv (2020)
Plateletcrit platelet crit 726 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000107/ScoringFiles/PGS000107.txt.gz
PGS000108 pdw PGP000051
Xu Y et al. bioRxiv (2020)
Platelet distribution width platelet component distribution width 579 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000108/ScoringFiles/PGS000108.txt.gz
PGS000109 plt PGP000051
Xu Y et al. bioRxiv (2020)
Platelet count platelet count 762 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000109/ScoringFiles/PGS000109.txt.gz
PGS000110 rbc PGP000051
Xu Y et al. bioRxiv (2020)
Red blood cell count erythrocyte count 707 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000110/ScoringFiles/PGS000110.txt.gz
PGS000111 ret PGP000051
Xu Y et al. bioRxiv (2020)
Reticulocyte count reticulocyte count 590 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000111/ScoringFiles/PGS000111.txt.gz
PGS000112 ret_p PGP000051
Xu Y et al. bioRxiv (2020)
Reticulocyte fraction of red cells reticulocyte count 572 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000112/ScoringFiles/PGS000112.txt.gz
PGS000113 wbc PGP000051
Xu Y et al. bioRxiv (2020)
White blood cell count leukocyte count 659 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000113/ScoringFiles/PGS000113.txt.gz
PGS000114 GRS-JIA-20 PGP000052
Canovas R et al. medRxiv (2020)
Juvenile Idiopathic Arthritis juvenile idiopathic arthritis 26 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000114/ScoringFiles/PGS000114.txt.gz
PGS000115 LDL-C_20 PGP000053
Trinder M et al. JAMA Cardiol (2020)
low density lipoprotein cholesterol low density lipoprotein cholesterol measurement 223 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000115/ScoringFiles/PGS000115.txt.gz
PGS000120 SCC10 PGP000055
Fritsche LG et al. PLoS Genet (2019)
Squamous cell carcinoma squamous cell carcinoma 10 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000120/ScoringFiles/PGS000120.txt.gz
PGS000116 CAD_EJ2020 PGP000054
Elliott J et al. JAMA (2020)
Coronary Artery Disease coronary artery disease 40,079 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000116/ScoringFiles/PGS000116.txt.gz
PGS000122 2018_BMD33_GRS.FN PGP000056
Ho-Le TP et al. J Bone Miner Res (2016)
Bone mineral density (BMD) bone density 33 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000122/ScoringFiles/PGS000122.txt.gz
PGS000118 MEL29 PGP000055
Fritsche LG et al. PLoS Genet (2019)
Melanoma melanoma 29 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000118/ScoringFiles/PGS000118.txt.gz
PGS000119 BCC32 PGP000055
Fritsche LG et al. PLoS Genet (2019)
Basal cell carcinoma basal cell carcinoma 32 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000119/ScoringFiles/PGS000119.txt.gz
PGS000123 2017_PD16 PGP000059
Ibanez L et al. BMC Neurol (2017)
Parkinson disease Parkinson's disease 16 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000123/ScoringFiles/PGS000123.txt.gz
PGS000121 2018_BMD62_GRS.FN PGP000056
Ho-Le TP et al. J Bone Miner Res (2016)
Bone mineral density (BMD) bone density 62 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000121/ScoringFiles/PGS000121.txt.gz
PGS000124 IOP_AS PGP000061
MacGregor S et al. Nat Genet (2018)
Intraocular pressure intraocular pressure measurement 103 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000124/ScoringFiles/PGS000124.txt.gz
PGS000125 Qi_T2D_2017 PGP000062
Qi Q et al. Diabetes (2017)
Type 2 Diabetes type II diabetes mellitus 80 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000125/ScoringFiles/PGS000125.txt.gz
PGS000126 Urate_GRS PGP000063
Tin A et al. Nat Genet (2019)
Serum urate urate measurement 114 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000126/ScoringFiles/PGS000126.txt.gz
PGS000132 GS-G-EAS PGP000064
Wheeler E et al. PLoS Med (2017)
Hemoglobin A1c A1C measurement 19 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000132/ScoringFiles/PGS000132.txt.gz
PGS000127 GS-E-EUR PGP000064
Wheeler E et al. PLoS Med (2017)
Hemoglobin A1c A1C measurement 21 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000127/ScoringFiles/PGS000127.txt.gz
PGS000128 GS-E-AFR PGP000064
Wheeler E et al. PLoS Med (2017)
Hemoglobin A1c A1C measurement 22 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000128/ScoringFiles/PGS000128.txt.gz
PGS000129 GS-E-EAS PGP000064
Wheeler E et al. PLoS Med (2017)
Hemoglobin A1c A1C measurement 17 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000129/ScoringFiles/PGS000129.txt.gz
PGS000130 GS-G-EUR PGP000064
Wheeler E et al. PLoS Med (2017)
Hemoglobin A1c A1C measurement 19 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000130/ScoringFiles/PGS000130.txt.gz
PGS000131 GS-G-AFR PGP000064
Wheeler E et al. PLoS Med (2017)
Hemoglobin A1c A1C measurement 19 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000131/ScoringFiles/PGS000131.txt.gz
PGS000136 SCZ_PBK PGP000065
Zheutlin AB et al. Am J Psychiatry (2019)
Schizophrenia schizophrenia 833,502 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000136/ScoringFiles/PGS000136.txt.gz
PGS000117 CVD_EJ2020 PGP000054
Elliott J et al. JAMA (2020)
Cardiovascular Disease cardiovascular disease 297,862 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000117/ScoringFiles/PGS000117.txt.gz
PGS000134 SCZ_GHS PGP000065
Zheutlin AB et al. Am J Psychiatry (2019)
Schizophrenia schizophrenia 830,589 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000134/ScoringFiles/PGS000134.txt.gz
PGS000133 SCZ_BVU PGP000065
Zheutlin AB et al. Am J Psychiatry (2019)
Schizophrenia schizophrenia 604,645 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000133/ScoringFiles/PGS000133.txt.gz
PGS000137 MTAG_glaucoma PGP000066
Craig JE et al. Nat Genet (2020)
Glaucoma glaucoma 2,673 http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000137/ScoringFiles/PGS000137.txt.gz