Trait: sex hormone-binding globulin

Experimental Factor Ontology (EFO) Information
Identifier EFO_0003941
Description
  • A glycoprotein migrating as a beta-globulin. Its molecular weight, 52,000 or 95,000-115,000, indicates that it exists as a dimer. The protein binds testosterone, dihydrotestosterone, and estradiol in the plasma. Sex hormone-binding protein has the same amino acid sequence as ANDROGEN-BINDING PROTEIN. They differ by their sites of synthesis and post-translational oligosaccharide modifications.
  • http://en.wikipedia.org/wiki/Sex_hormone-binding_globulin
Trait category
Other trait
Synonyms 11 synonyms
  • Binding Globulin, Testosterone-Estradiol
  • Globulin, Sex Hormone-Binding
  • Globulin, Testosterone-Estradiol Binding
  • Hormone-Binding Globulin, Sex
  • SHBG
  • Sex Hormone Binding Globulin
  • Sex Steroid Binding Protein
  • Sex Steroid-Binding Protein
  • Steroid-Binding Protein, Sex
  • Testosterone Estradiol Binding Globulin
  • Testosterone-Estradiol Binding Globulin
Mapped terms 2 mapped terms
  • MeSH:D012738
  • NCIt:C17128

Associated Polygenic Score(s)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
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Ancestry legend
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Multi-ancestry (excluding European)
African
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Additional Asian Ancestries
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Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004340
(X30830.score)
 PGP000561 |
Jung H et al. Commun Biol (2024)
 SHBG (nmol/L) sex hormone-binding globulin 1,059,939
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004340/ScoringFiles/PGS004340.txt.gz

Performance Metrics

Disclaimer: The performance metrics are displayed as reported by the source studies. It is important to note that metrics are not necessarily comparable with each other. For example, metrics depend on the sample characteristics (described by the PGS Catalog Sample Set [PSS] ID), phenotyping, and statistical modelling. Please refer to the source publication for additional guidance on performance.

PGS Performance
Metric ID (PPM) 		Evaluated Score PGS Sample Set ID
(PSS) 		Performance Source Trait PGS Effect Sizes
(per SD change) 		Classification Metrics Other Metrics Covariates Included in the Model PGS Performance:
Other Relevant Information
PPM020455 PGS004340
(X30830.score)
 PSS011364|
European Ancestry|
56,192 individuals
 PGP000561 |
Jung H et al. Commun Biol (2024)
 Reported Trait: SHBG (nmol/L) — — PGS R2 (no covariates): 0.26166 — —

Evaluated Samples

PGS Sample Set ID
(PSS) 		Phenotype Definitions and Methods Participant Follow-up Time Sample Numbers Age of Study Participants Sample Ancestry Additional Ancestry Description Cohort(s) Additional Sample/Cohort Information
PSS011364 — — 56,192 individuals — European — UKB —