Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS018458
(TPMI_145_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Oral cavity cancer oral cavity cancer 983,776
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018458/ScoringFiles/PGS018458.txt.gz
PGS018459
(TPMI_145_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Oral cavity cancer oral cavity cancer 1,006,843
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018459/ScoringFiles/PGS018459.txt.gz
PGS018460
(TPMI_145.2_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Tongue cancer tongue cancer 11
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018460/ScoringFiles/PGS018460.txt.gz
PGS018461
(TPMI_145.2_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Tongue cancer tongue cancer 34,059
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018461/ScoringFiles/PGS018461.txt.gz
PGS018462
(TPMI_145.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Tongue cancer tongue cancer 570,182
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018462/ScoringFiles/PGS018462.txt.gz
PGS018463
(TPMI_145.2_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Tongue cancer tongue cancer 983,776
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018463/ScoringFiles/PGS018463.txt.gz
PGS018464
(TPMI_145.2_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Tongue cancer tongue cancer 1,003,968
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018464/ScoringFiles/PGS018464.txt.gz
PGS018465
(TPMI_149_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of larynx pharynx nasal cavities larynx cancer 4
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018465/ScoringFiles/PGS018465.txt.gz
PGS018466
(TPMI_149_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of larynx pharynx nasal cavities larynx cancer 939,820
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018466/ScoringFiles/PGS018466.txt.gz
PGS018467
(TPMI_149_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of larynx pharynx nasal cavities larynx cancer 15,690
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018467/ScoringFiles/PGS018467.txt.gz
PGS018468
(TPMI_149_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of larynx pharynx nasal cavities larynx cancer 983,777
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018468/ScoringFiles/PGS018468.txt.gz
PGS018469
(TPMI_149_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of larynx pharynx nasal cavities larynx cancer 1,000,712
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018469/ScoringFiles/PGS018469.txt.gz
PGS018470
(TPMI_149.2_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of nasopharynx malignant tumor of nasopharynx 211
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018470/ScoringFiles/PGS018470.txt.gz
PGS018471
(TPMI_149.2_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of nasopharynx malignant tumor of nasopharynx 45,670
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018471/ScoringFiles/PGS018471.txt.gz
PGS018472
(TPMI_149.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of nasopharynx malignant tumor of nasopharynx 10,449
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018472/ScoringFiles/PGS018472.txt.gz
PGS018473
(TPMI_149.2_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of nasopharynx malignant tumor of nasopharynx 983,776
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018473/ScoringFiles/PGS018473.txt.gz
PGS018474
(TPMI_149.2_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of nasopharynx malignant tumor of nasopharynx 1,005,312
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018474/ScoringFiles/PGS018474.txt.gz
PGS018475
(TPMI_150_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Esophageal cancer esophageal cancer 5
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018475/ScoringFiles/PGS018475.txt.gz
PGS018476
(TPMI_150_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Esophageal cancer esophageal cancer 255,880
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018476/ScoringFiles/PGS018476.txt.gz
PGS018477
(TPMI_150_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Esophageal cancer esophageal cancer 30,188
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018477/ScoringFiles/PGS018477.txt.gz
PGS018478
(TPMI_150_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Esophageal cancer esophageal cancer 983,792
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018478/ScoringFiles/PGS018478.txt.gz
PGS018479
(TPMI_150_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Esophageal cancer esophageal cancer 1,017,445
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018479/ScoringFiles/PGS018479.txt.gz
PGS018480
(TPMI_151_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of stomach gastric cancer 2
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018480/ScoringFiles/PGS018480.txt.gz
PGS018481
(TPMI_151_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of stomach gastric cancer 130,571
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018481/ScoringFiles/PGS018481.txt.gz
PGS018482
(TPMI_151_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of stomach gastric cancer 488,012
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018482/ScoringFiles/PGS018482.txt.gz
PGS018483
(TPMI_151_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of stomach gastric cancer 983,814
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018483/ScoringFiles/PGS018483.txt.gz
PGS018484
(TPMI_151_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of stomach gastric cancer 991,822
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018484/ScoringFiles/PGS018484.txt.gz
PGS018485
(TPMI_153_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colorectal cancer colorectal cancer 1,085
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018485/ScoringFiles/PGS018485.txt.gz
PGS018486
(TPMI_153_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colorectal cancer colorectal cancer 939,846
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018486/ScoringFiles/PGS018486.txt.gz
PGS018487
(TPMI_153_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colorectal cancer colorectal cancer 51,028
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018487/ScoringFiles/PGS018487.txt.gz
PGS018488
(TPMI_153_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colorectal cancer colorectal cancer 983,800
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018488/ScoringFiles/PGS018488.txt.gz
PGS018489
(TPMI_153_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colorectal cancer colorectal cancer 1,005,477
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018489/ScoringFiles/PGS018489.txt.gz
PGS018490
(TPMI_153.2_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colon cancer malignant colon neoplasm 13,140
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018490/ScoringFiles/PGS018490.txt.gz
PGS018491
(TPMI_153.2_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colon cancer malignant colon neoplasm 939,847
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018491/ScoringFiles/PGS018491.txt.gz
PGS018492
(TPMI_153.2_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colon cancer malignant colon neoplasm 32,744
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018492/ScoringFiles/PGS018492.txt.gz
PGS018493
(TPMI_153.2_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colon cancer malignant colon neoplasm 983,802
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018493/ScoringFiles/PGS018493.txt.gz
PGS018494
(TPMI_153.2_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Colon cancer malignant colon neoplasm 996,354
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018494/ScoringFiles/PGS018494.txt.gz
PGS018495
(TPMI_153.3_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Malignant neoplasm of rectum rectosigmoid junction and anus rectosigmoid junction neoplasm 133,830
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018495/ScoringFiles/PGS018495.txt.gz
PGS018496
(TPMI_153.3_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Malignant neoplasm of rectum rectosigmoid junction and anus rectosigmoid junction neoplasm 939,895
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018496/ScoringFiles/PGS018496.txt.gz
PGS018497
(TPMI_153.3_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Malignant neoplasm of rectum rectosigmoid junction and anus rectosigmoid junction neoplasm 21,604
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018497/ScoringFiles/PGS018497.txt.gz
PGS018498
(TPMI_153.3_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Malignant neoplasm of rectum rectosigmoid junction and anus rectosigmoid junction neoplasm 983,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018498/ScoringFiles/PGS018498.txt.gz
PGS018499
(TPMI_153.3_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Malignant neoplasm of rectum rectosigmoid junction and anus rectosigmoid junction neoplasm 1,000,378
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018499/ScoringFiles/PGS018499.txt.gz
PGS018500
(TPMI_155_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of liver and intrahepatic bile duct liver cancer 20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018500/ScoringFiles/PGS018500.txt.gz
PGS018501
(TPMI_155_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of liver and intrahepatic bile duct liver cancer 939,828
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018501/ScoringFiles/PGS018501.txt.gz
PGS018502
(TPMI_155_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of liver and intrahepatic bile duct liver cancer 25,084
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018502/ScoringFiles/PGS018502.txt.gz
PGS018503
(TPMI_155_PRS-CS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of liver and intrahepatic bile duct liver cancer 983,778
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018503/ScoringFiles/PGS018503.txt.gz
PGS018504
(TPMI_155_SBayesR)
 PGP000835 |
Chen HH et al. Nature (2025)
 Cancer of liver and intrahepatic bile duct liver cancer 977,058
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018504/ScoringFiles/PGS018504.txt.gz
PGS018505
(TPMI_155.1_Lassosum2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Malignant neoplasm of liver primary liver cancer 76
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018505/ScoringFiles/PGS018505.txt.gz
PGS018506
(TPMI_155.1_LDpred2)
 PGP000835 |
Chen HH et al. Nature (2025)
 Malignant neoplasm of liver primary liver cancer 939,828
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018506/ScoringFiles/PGS018506.txt.gz
PGS018507
(TPMI_155.1_MegaPRS)
 PGP000835 |
Chen HH et al. Nature (2025)
 Malignant neoplasm of liver primary liver cancer 24,458
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018507/ScoringFiles/PGS018507.txt.gz
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