Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
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Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
Scoring File (FTP Link)
PGS019019
(TPMI_362.2_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Degeneration of macula and posterior pole of retina degeneration of macula and posterior pole 983,766
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019019/ScoringFiles/PGS019019.txt.gz
PGS019020
(TPMI_362.2_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Degeneration of macula and posterior pole of retina degeneration of macula and posterior pole 1,008,320
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019020/ScoringFiles/PGS019020.txt.gz
PGS019021
(TPMI_362.6_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Peripheral retinal degenerations retinal degeneration 107
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019021/ScoringFiles/PGS019021.txt.gz
PGS019022
(TPMI_362.6_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Peripheral retinal degenerations retinal degeneration 939,860
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019022/ScoringFiles/PGS019022.txt.gz
PGS019023
(TPMI_362.6_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Peripheral retinal degenerations retinal degeneration 24,607
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019023/ScoringFiles/PGS019023.txt.gz
PGS019024
(TPMI_362.6_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Peripheral retinal degenerations retinal degeneration 983,802
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019024/ScoringFiles/PGS019024.txt.gz
PGS019025
(TPMI_362.6_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Peripheral retinal degenerations retinal degeneration 1,011,772
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019025/ScoringFiles/PGS019025.txt.gz
PGS019026
(TPMI_362.26_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Macular puckering of retina degeneration of macula and posterior pole 5,750
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019026/ScoringFiles/PGS019026.txt.gz
PGS019027
(TPMI_362.26_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Macular puckering of retina degeneration of macula and posterior pole 337,189
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019027/ScoringFiles/PGS019027.txt.gz
PGS019028
(TPMI_362.26_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Macular puckering of retina degeneration of macula and posterior pole 15,945
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019028/ScoringFiles/PGS019028.txt.gz
PGS019029
(TPMI_362.26_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Macular puckering of retina degeneration of macula and posterior pole 983,768
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019029/ScoringFiles/PGS019029.txt.gz
PGS019030
(TPMI_362.26_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Macular puckering of retina degeneration of macula and posterior pole 1,009,853
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019030/ScoringFiles/PGS019030.txt.gz
PGS019031
(TPMI_362.29_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Macular degeneration senile of retina NOS macular degeneration 222
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019031/ScoringFiles/PGS019031.txt.gz
PGS019032
(TPMI_362.29_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Macular degeneration senile of retina NOS macular degeneration 939,874
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019032/ScoringFiles/PGS019032.txt.gz
PGS019033
(TPMI_362.29_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Macular degeneration senile of retina NOS macular degeneration 21,742
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019033/ScoringFiles/PGS019033.txt.gz
PGS019034
(TPMI_362.29_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Macular degeneration senile of retina NOS macular degeneration 983,811
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019034/ScoringFiles/PGS019034.txt.gz
PGS019035
(TPMI_362.29_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Macular degeneration senile of retina NOS macular degeneration 1,000,676
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019035/ScoringFiles/PGS019035.txt.gz
PGS019036
(TPMI_365_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Glaucoma glaucoma 126,770
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019036/ScoringFiles/PGS019036.txt.gz
PGS019037
(TPMI_365_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Glaucoma glaucoma 939,871
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019037/ScoringFiles/PGS019037.txt.gz
PGS019038
(TPMI_365_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Glaucoma glaucoma 480,022
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019038/ScoringFiles/PGS019038.txt.gz
PGS019039
(TPMI_365_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Glaucoma glaucoma 983,814
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019039/ScoringFiles/PGS019039.txt.gz
PGS019040
(TPMI_365_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Glaucoma glaucoma 976,353
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019040/ScoringFiles/PGS019040.txt.gz
PGS019041
(TPMI_365.1_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Open angle glaucoma open-angle glaucoma 127,770
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019041/ScoringFiles/PGS019041.txt.gz
PGS019042
(TPMI_365.1_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Open angle glaucoma open-angle glaucoma 939,805
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019042/ScoringFiles/PGS019042.txt.gz
PGS019043
(TPMI_365.1_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Open angle glaucoma open-angle glaucoma 28,958
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019043/ScoringFiles/PGS019043.txt.gz
PGS019044
(TPMI_365.1_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Open angle glaucoma open-angle glaucoma 983,768
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019044/ScoringFiles/PGS019044.txt.gz
PGS019045
(TPMI_365.1_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Open angle glaucoma open-angle glaucoma 1,001,197
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019045/ScoringFiles/PGS019045.txt.gz
PGS019046
(TPMI_366_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Cataract cataract 408,872
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019046/ScoringFiles/PGS019046.txt.gz
PGS019047
(TPMI_366_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Cataract cataract 939,893
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019047/ScoringFiles/PGS019047.txt.gz
PGS019048
(TPMI_366_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Cataract cataract 34,086
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019048/ScoringFiles/PGS019048.txt.gz
PGS019049
(TPMI_366_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Cataract cataract 983,827
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019049/ScoringFiles/PGS019049.txt.gz
PGS019050
(TPMI_366_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Cataract cataract 918,007
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019050/ScoringFiles/PGS019050.txt.gz
PGS019051
(TPMI_368_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Visual disturbances Abnormality of vision 711,283
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019051/ScoringFiles/PGS019051.txt.gz
PGS019052
(TPMI_368_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Visual disturbances Abnormality of vision 939,900
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019052/ScoringFiles/PGS019052.txt.gz
PGS019053
(TPMI_368_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Visual disturbances Abnormality of vision 464,883
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019053/ScoringFiles/PGS019053.txt.gz
PGS019054
(TPMI_368_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Visual disturbances Abnormality of vision 983,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019054/ScoringFiles/PGS019054.txt.gz
PGS019055
(TPMI_368_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Visual disturbances Abnormality of vision 983,298
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019055/ScoringFiles/PGS019055.txt.gz
PGS019056
(TPMI_370_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Keratitis keratitis 130,226
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019056/ScoringFiles/PGS019056.txt.gz
PGS019057
(TPMI_370_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Keratitis keratitis 256,197
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019057/ScoringFiles/PGS019057.txt.gz
PGS019058
(TPMI_370_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Keratitis keratitis 20,519
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019058/ScoringFiles/PGS019058.txt.gz
PGS019059
(TPMI_370_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Keratitis keratitis 983,798
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019059/ScoringFiles/PGS019059.txt.gz
PGS019060
(TPMI_370_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Keratitis keratitis 983,726
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019060/ScoringFiles/PGS019060.txt.gz
PGS019061
(TPMI_371.1_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Uveitis noninfectious or NOS uveitis 20
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019061/ScoringFiles/PGS019061.txt.gz
PGS019062
(TPMI_371.1_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Uveitis noninfectious or NOS uveitis 939,787
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019062/ScoringFiles/PGS019062.txt.gz
PGS019063
(TPMI_371.1_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Uveitis noninfectious or NOS uveitis 323,165
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019063/ScoringFiles/PGS019063.txt.gz
PGS019064
(TPMI_371.1_PRS-CS)
PGP000835 |
Chen HH et al. Nature (2025)
Uveitis noninfectious or NOS uveitis 983,753
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019064/ScoringFiles/PGS019064.txt.gz
PGS019065
(TPMI_371.1_SBayesR)
PGP000835 |
Chen HH et al. Nature (2025)
Uveitis noninfectious or NOS uveitis 21,630
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019065/ScoringFiles/PGS019065.txt.gz
PGS019066
(TPMI_379_Lassosum2)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of eye eye disorder 13
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019066/ScoringFiles/PGS019066.txt.gz
PGS019067
(TPMI_379_LDpred2)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of eye eye disorder 295,490
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019067/ScoringFiles/PGS019067.txt.gz
PGS019068
(TPMI_379_MegaPRS)
PGP000835 |
Chen HH et al. Nature (2025)
Other disorders of eye eye disorder 456,488
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS019068/ScoringFiles/PGS019068.txt.gz