Experimental Factor Ontology (EFO) Information | |
Identifier | EFO_0007006 |
Description |
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Trait category |
Other measurement
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Polygenic Score (PGS) ID | PGS Name | PGS Publication (PGP) ID | Reported Trait | Mapped Trait(s) (Ontology) | Number of Variants | PGS Scoring File (FTP Link) |
---|---|---|---|---|---|---|
PGS000144 | SelfRepDep | PGP000068 Cai N et al. Nat Genet (2020) | Self-reported depression or depression symptoms | self-reported trait depressive symptom measurement |
21,828 | http://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000144/ScoringFiles/PGS000144.txt.gz |
PGS Performance Metric ID (PPM ID) |
Evaluated Score |
PGS Sample Set ID (PSS ID) |
Performance Source | Trait |
PGS Effect Sizes (per SD change) |
PGS Classification Metrics | Other Metrics | Covariates Included in the Model | PGS Performance: Other Relevant Information |
---|---|---|---|---|---|---|---|---|---|
PPM000436 | PGS000144 (SelfRepDep) | PSS000250 | PGP000068 Cai N et al. (2020) | Reported Trait: Major Depressive Disorder status | — | AUROC: 0.51641 | R²: 0.00117 | Cohort | — |
PGS Sample Set ID (PSS ID) |
Phenotype Definitions and Methods | Participant Follow-up Time | Sample Numbers | Age of Study Participants | Sample Ancestry | Additional Ancestry Description | Cohort(s) | Additional Sample/Cohort Information |
---|---|---|---|---|---|---|---|---|
PSS000250 | — | — | [
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— | European | — | 15 cohorts
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Part of PGC29 (PMID: 29700475) |