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PGS Catalog
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Polygenic Scores (PGS)
Polygenic Scores (PGS)
Filter PGS by Participant Ancestry
Individuals included in:
Any Stage [G, D, E]
All Stages combined [G + D + E]
Development [G, D]
- GWAS [G]
- Score development [D]
PGS Evaluation [E]
G
- Source of Variant Associations (
G
WAS)
D
- Score
D
evelopment/Training
E
- PGS
E
valuation
List of ancestries includes:
--
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Display options:
Show European ancestry data
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only
Multi-ancestry data
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name
PGS Publication ID
(PGP)
Reported Trait
Mapped Trait(s)
(Ontology)
Number of Variants
Ancestry distribution
GWAS
Dev
Eval
Scoring File
(FTP Link)
PGS018719
(TPMI_250_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetes mellitus
diabetes mellitus
309,556
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018719/ScoringFiles/PGS018719.txt.gz
PGS018720
(TPMI_250_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetes mellitus
diabetes mellitus
983,776
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018720/ScoringFiles/PGS018720.txt.gz
PGS018721
(TPMI_250_PRSmix+)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetes mellitus
diabetes mellitus
1,071,472
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018721/ScoringFiles/PGS018721.txt.gz
PGS018722
(TPMI_250_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetes mellitus
diabetes mellitus
802,669
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018722/ScoringFiles/PGS018722.txt.gz
PGS018723
(TPMI_250.2_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
49,618
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018723/ScoringFiles/PGS018723.txt.gz
PGS018724
(TPMI_250.2_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
939,826
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018724/ScoringFiles/PGS018724.txt.gz
PGS018725
(TPMI_250.2_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
687,652
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018725/ScoringFiles/PGS018725.txt.gz
PGS018726
(TPMI_250.2_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
983,778
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018726/ScoringFiles/PGS018726.txt.gz
PGS018727
(TPMI_250.2_PRSmix+)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
1,071,475
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018727/ScoringFiles/PGS018727.txt.gz
PGS018728
(TPMI_250.2_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes (T2D)
type 2 diabetes mellitus
883,373
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018728/ScoringFiles/PGS018728.txt.gz
PGS018729
(TPMI_250.4_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Abnormal glucose
Abnormal blood glucose concentration
32
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018729/ScoringFiles/PGS018729.txt.gz
PGS018730
(TPMI_250.4_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Abnormal glucose
Abnormal blood glucose concentration
939,853
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018730/ScoringFiles/PGS018730.txt.gz
PGS018731
(TPMI_250.4_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Abnormal glucose
Abnormal blood glucose concentration
27,487
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018731/ScoringFiles/PGS018731.txt.gz
PGS018732
(TPMI_250.4_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Abnormal glucose
Abnormal blood glucose concentration
983,796
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018732/ScoringFiles/PGS018732.txt.gz
PGS018733
(TPMI_250.4_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Abnormal glucose
Abnormal blood glucose concentration
968,581
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018733/ScoringFiles/PGS018733.txt.gz
PGS018734
(TPMI_250.6_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Polyneuropathy in diabetes
diabetic neuropathy
669
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018734/ScoringFiles/PGS018734.txt.gz
PGS018735
(TPMI_250.6_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Polyneuropathy in diabetes
diabetic neuropathy
939,815
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018735/ScoringFiles/PGS018735.txt.gz
PGS018736
(TPMI_250.6_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Polyneuropathy in diabetes
diabetic neuropathy
54,980
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018736/ScoringFiles/PGS018736.txt.gz
PGS018737
(TPMI_250.6_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Polyneuropathy in diabetes
diabetic neuropathy
983,767
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018737/ScoringFiles/PGS018737.txt.gz
PGS018738
(TPMI_250.6_PRSmix+)
PGP000835
|
Chen HH
et al.
Nature (2025)
Polyneuropathy in diabetes
diabetic neuropathy
1,071,477
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018738/ScoringFiles/PGS018738.txt.gz
PGS018739
(TPMI_250.6_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Polyneuropathy in diabetes
diabetic neuropathy
996,392
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018739/ScoringFiles/PGS018739.txt.gz
PGS018740
(TPMI_250.7_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetic retinopathy
diabetic retinopathy
96
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018740/ScoringFiles/PGS018740.txt.gz
PGS018741
(TPMI_250.7_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetic retinopathy
diabetic retinopathy
939,811
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018741/ScoringFiles/PGS018741.txt.gz
PGS018742
(TPMI_250.7_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetic retinopathy
diabetic retinopathy
80,280
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018742/ScoringFiles/PGS018742.txt.gz
PGS018743
(TPMI_250.7_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetic retinopathy
diabetic retinopathy
983,771
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018743/ScoringFiles/PGS018743.txt.gz
PGS018744
(TPMI_250.7_PRSmix+)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetic retinopathy
diabetic retinopathy
1,071,355
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018744/ScoringFiles/PGS018744.txt.gz
PGS018745
(TPMI_250.7_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Diabetic retinopathy
diabetic retinopathy
1,014,773
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018745/ScoringFiles/PGS018745.txt.gz
PGS018746
(TPMI_250.21_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ketoacidosis
type 2 diabetes mellitus
9,978
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018746/ScoringFiles/PGS018746.txt.gz
PGS018747
(TPMI_250.21_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ketoacidosis
type 2 diabetes mellitus
939,820
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018747/ScoringFiles/PGS018747.txt.gz
PGS018748
(TPMI_250.21_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ketoacidosis
type 2 diabetes mellitus
126,575
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018748/ScoringFiles/PGS018748.txt.gz
PGS018749
(TPMI_250.21_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ketoacidosis
type 2 diabetes mellitus
983,771
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018749/ScoringFiles/PGS018749.txt.gz
PGS018750
(TPMI_250.21_PRSmix+)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ketoacidosis
type 2 diabetes mellitus
1,071,473
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018750/ScoringFiles/PGS018750.txt.gz
PGS018751
(TPMI_250.21_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ketoacidosis
type 2 diabetes mellitus
577,953
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018751/ScoringFiles/PGS018751.txt.gz
PGS018752
(TPMI_250.22_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with renal manifestations
type 2 diabetes mellitus
37,218
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018752/ScoringFiles/PGS018752.txt.gz
PGS018753
(TPMI_250.22_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with renal manifestations
type 2 diabetes mellitus
939,818
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018753/ScoringFiles/PGS018753.txt.gz
PGS018754
(TPMI_250.22_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with renal manifestations
type 2 diabetes mellitus
153,238
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018754/ScoringFiles/PGS018754.txt.gz
PGS018755
(TPMI_250.22_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with renal manifestations
type 2 diabetes mellitus
983,777
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018755/ScoringFiles/PGS018755.txt.gz
PGS018756
(TPMI_250.22_PRSmix+)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with renal manifestations
type 2 diabetes mellitus
1,071,472
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018756/ScoringFiles/PGS018756.txt.gz
PGS018757
(TPMI_250.22_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with renal manifestations
type 2 diabetes mellitus
979,168
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018757/ScoringFiles/PGS018757.txt.gz
PGS018758
(TPMI_250.23_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ophthalmic manifestations
diabetic eye disease
7,766
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018758/ScoringFiles/PGS018758.txt.gz
PGS018759
(TPMI_250.23_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ophthalmic manifestations
diabetic eye disease
939,826
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018759/ScoringFiles/PGS018759.txt.gz
PGS018760
(TPMI_250.23_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ophthalmic manifestations
diabetic eye disease
159,132
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018760/ScoringFiles/PGS018760.txt.gz
PGS018761
(TPMI_250.23_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ophthalmic manifestations
diabetic eye disease
983,777
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018761/ScoringFiles/PGS018761.txt.gz
PGS018762
(TPMI_250.23_PRSmix+)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ophthalmic manifestations
diabetic eye disease
1,071,469
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018762/ScoringFiles/PGS018762.txt.gz
PGS018763
(TPMI_250.23_SBayesR)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with ophthalmic manifestations
diabetic eye disease
1,005,452
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018763/ScoringFiles/PGS018763.txt.gz
PGS018764
(TPMI_250.24_Lassosum2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with neurological manifestations
type 2 diabetes mellitus
7,881
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018764/ScoringFiles/PGS018764.txt.gz
PGS018765
(TPMI_250.24_LDpred2)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with neurological manifestations
type 2 diabetes mellitus
939,817
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018765/ScoringFiles/PGS018765.txt.gz
PGS018766
(TPMI_250.24_MegaPRS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with neurological manifestations
type 2 diabetes mellitus
154,108
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018766/ScoringFiles/PGS018766.txt.gz
PGS018767
(TPMI_250.24_PRS-CS)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with neurological manifestations
type 2 diabetes mellitus
983,771
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018767/ScoringFiles/PGS018767.txt.gz
PGS018768
(TPMI_250.24_PRSmix+)
PGP000835
|
Chen HH
et al.
Nature (2025)
Type 2 diabetes with neurological manifestations
type 2 diabetes mellitus
1,071,471
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS018768/ScoringFiles/PGS018768.txt.gz
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