Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS000725
(PRS_Pancreas)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Pancreatic cancer pancreatic carcinoma 22
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000725/ScoringFiles/PGS000725.txt.gz
PGS000724
(PRS_Ovary)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Epithelial ovarian cancer ovarian carcinoma 31
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000724/ScoringFiles/PGS000724.txt.gz
PGS000722
(PRS_Kidney)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Kidney cancer renal carcinoma 15
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000722/ScoringFiles/PGS000722.txt.gz
PGS000723
(PRS_Bladder)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Bladder cancer urinary bladder carcinoma 14
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000723/ScoringFiles/PGS000723.txt.gz
PGS000719
(PRS_Prostate)
 PGP000135 |
Jia G et al. JNCI Cancer Spectr (2020)
 Prostate cancer prostate carcinoma 134
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000719/ScoringFiles/PGS000719.txt.gz
PGS000718
(PRPBB_44)
 PGP000134 |
Lanfear DE et al. Circ Heart Fail (2020)
 Beta-blocker survival benefit response to beta blocker 44
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000718/ScoringFiles/PGS000718.txt.gz
PGS000717
(PGS557_albs)
 PGP000132 |
Richardson TG et al. BMJ (2020)
 Adult life body size body mass index 557
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000717/ScoringFiles/PGS000717.txt.gz
PGS000716
(PGS295_elbs)
 PGP000132 |
Richardson TG et al. BMJ (2020)
 Early life body size body mass index,
comparative body size at age 10, self-reported		 295
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000716/ScoringFiles/PGS000716.txt.gz
PGS000714
(PRS55_PC)
 PGP000130 |
Sipeky C et al. Sci Rep (2020)
 Prostate cancer prostate carcinoma 55
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000714/ScoringFiles/PGS000714.txt.gz
PGS000681
(snpnet.Direct_bilirubin)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Direct bilirubin [umol/L] bilirubin measurement 3,104
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000681/ScoringFiles/PGS000681.txt.gz - Check Terms/Licenses
PGS000693
(snpnet.Potassium_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Potassium in urine [mmol/L] urine potassium amount 2,423
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000693/ScoringFiles/PGS000693.txt.gz - Check Terms/Licenses
PGS000695
(snpnet.Sodium_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Sodium in urine [mmol/L] urinary metabolite measurement,
sodium measurement		 5,833
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000695/ScoringFiles/PGS000695.txt.gz - Check Terms/Licenses
PGS000678
(snpnet.Creatinine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Creatinine [umol/L] serum creatinine amount 21,027
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000678/ScoringFiles/PGS000678.txt.gz - Check Terms/Licenses
PGS000672
(snpnet.Apolipoprotein_B_adjstatins)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Apolipoprotein B [g/L] (statin adjusted) apolipoprotein B measurement 18,666
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000672/ScoringFiles/PGS000672.txt.gz - Check Terms/Licenses
PGS000680
(snpnet.Cystatin_C)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Cystatin C [mg/L] cystatin C measurement 24,487
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000680/ScoringFiles/PGS000680.txt.gz - Check Terms/Licenses
PGS000705
(HC188)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gallstones gallstones 183,458
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000705/ScoringFiles/PGS000705.txt.gz - Check Terms/Licenses
PGS000669
(snpnet.Albumin)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Albumin [g/L] serum albumin amount 11,912
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000669/ScoringFiles/PGS000669.txt.gz - Check Terms/Licenses
PGS000668
(snpnet.Alanine_aminotransferase)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Alanine aminotransferase [U/L] serum alanine aminotransferase amount 12,076
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000668/ScoringFiles/PGS000668.txt.gz - Check Terms/Licenses
PGS000707
(HC225)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Cholecystitis Cholecystitis 183,329
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000707/ScoringFiles/PGS000707.txt.gz - Check Terms/Licenses
PGS000676
(snpnet.Calcium)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Calcium [mmol/L] calcium measurement 12,334
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000676/ScoringFiles/PGS000676.txt.gz - Check Terms/Licenses
PGS000709
(HC299)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Heart failure heart failure 183,287
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000709/ScoringFiles/PGS000709.txt.gz - Check Terms/Licenses
PGS000713
(T2D)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 183,830
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000713/ScoringFiles/PGS000713.txt.gz - Check Terms/Licenses
PGS000687
(snpnet.IGF_1)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 IGF-1 [nmol/L] IGF-1 measurement 23,443
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000687/ScoringFiles/PGS000687.txt.gz - Check Terms/Licenses
PGS000699
(snpnet.Triglycerides)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Triglycerides [mmol/L] triglyceride measurement 16,003
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000699/ScoringFiles/PGS000699.txt.gz - Check Terms/Licenses
PGS000675
(snpnet.C_reactive_protein)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 C-reactive protein [mg/L] C-reactive protein measurement 17,378
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000675/ScoringFiles/PGS000675.txt.gz - Check Terms/Licenses
PGS000703
(HC132)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Angina angina pectoris 183,692
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000703/ScoringFiles/PGS000703.txt.gz - Check Terms/Licenses
PGS000706
(HC215)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Hypertension hypertension 186,726
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000706/ScoringFiles/PGS000706.txt.gz - Check Terms/Licenses
PGS000689
(snpnet.Lipoprotein_A)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Lipoprotein A [nmol/L] lipoprotein A measurement 8,308
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000689/ScoringFiles/PGS000689.txt.gz - Check Terms/Licenses
PGS000677
(snpnet.Cholesterol_adjstatins)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Cholesterol [mmol/L] (statin adjusted) total cholesterol measurement 17,204
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000677/ScoringFiles/PGS000677.txt.gz - Check Terms/Licenses
PGS000673
(snpnet.Aspartate_aminotransferase)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Aspartate aminotransferase [U/L] aspartate aminotransferase measurement 12,829
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000673/ScoringFiles/PGS000673.txt.gz - Check Terms/Licenses
PGS000686
(snpnet.HDL_cholesterol)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 HDL cholesterol [mmol/L] high density lipoprotein cholesterol measurement 25,069
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000686/ScoringFiles/PGS000686.txt.gz - Check Terms/Licenses
PGS000671
(snpnet.Apolipoprotein_A)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Apolipoprotein A [g/L] apolipoprotein A 1 measurement 19,324
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000671/ScoringFiles/PGS000671.txt.gz - Check Terms/Licenses
PGS000708
(HC294)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Kidney failure kidney failure 183,272
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000708/ScoringFiles/PGS000708.txt.gz - Check Terms/Licenses
PGS000682
(snpnet.eGFR)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 eGFR [ml/min/1.73m2] glomerular filtration rate 17,467
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000682/ScoringFiles/PGS000682.txt.gz - Check Terms/Licenses
PGS000694
(snpnet.SHBG)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 SHBG [nmol/L] sex hormone-binding globulin measurement 19,328
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000694/ScoringFiles/PGS000694.txt.gz - Check Terms/Licenses
PGS000702
(snpnet.Vitamin_D)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Vitamin D [nmol/L] vitamin D level 8,012
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000702/ScoringFiles/PGS000702.txt.gz - Check Terms/Licenses
PGS000710
(HC326)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Myocardial infarction myocardial infarction 183,566
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000710/ScoringFiles/PGS000710.txt.gz - Check Terms/Licenses
PGS000679
(snpnet.Creatinine_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Creatinine in urine [umol/L] creatinine clearance measurement 5,469
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000679/ScoringFiles/PGS000679.txt.gz - Check Terms/Licenses
PGS000701
(snpnet.Urea)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Urea [mmol/L] serum urea amount 12,351
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000701/ScoringFiles/PGS000701.txt.gz - Check Terms/Licenses
PGS000698
(snpnet.Total_protein)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Total protein [g/L] total blood protein measurement 16,420
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000698/ScoringFiles/PGS000698.txt.gz - Check Terms/Licenses
PGS000685
(snpnet.Glycated_haemoglobin_HbA1c)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 HbA1c [mmol/mol] HbA1c measurement 14,658
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000685/ScoringFiles/PGS000685.txt.gz - Check Terms/Licenses
PGS000683
(snpnet.Gamma_glutamyltransferase)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gamma-glutamyl transferase [U/L] serum gamma-glutamyl transferase measurement 17,323
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000683/ScoringFiles/PGS000683.txt.gz - Check Terms/Licenses
PGS000690
(snpnet.Microalbumin_in_urine)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Microalbumin in urine [mg/L] urinary microalbumin measurement 111
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000690/ScoringFiles/PGS000690.txt.gz - Check Terms/Licenses
PGS000696
(snpnet.Testosterone)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Testosterone [nmol/L] testosterone measurement 8,223
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000696/ScoringFiles/PGS000696.txt.gz - Check Terms/Licenses
PGS000692
(snpnet.Phosphate)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Phosphate [mmol/L] phosphate measurement 12,448
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000692/ScoringFiles/PGS000692.txt.gz - Check Terms/Licenses
PGS000711
(HC328)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Gout gout 183,332
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000711/ScoringFiles/PGS000711.txt.gz - Check Terms/Licenses
PGS000700
(snpnet.Urate)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Urate [umol/L] urate measurement 20,171
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000700/ScoringFiles/PGS000700.txt.gz - Check Terms/Licenses
PGS000674
(snpnet.AST_ALT_ratio)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 AST to ALT ratio aspartate aminotransferase to alanine aminotransferase ratio 15,548
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000674/ScoringFiles/PGS000674.txt.gz - Check Terms/Licenses
PGS000688
(snpnet.LDL_direct_adjstatins)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 LDL cholesterol [mmol/L] (statin adjusted) low density lipoprotein cholesterol measurement 16,184
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000688/ScoringFiles/PGS000688.txt.gz - Check Terms/Licenses
PGS000704
(HC171)
 PGP000128 |
Sinnott-Armstrong N et al. Nat Genet (2021)
 Alcoholic cirrhosis alcoholic liver cirrhosis 183,271
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000704/ScoringFiles/PGS000704.txt.gz - Check Terms/Licenses
Showing 4501 to 4550 of 5221 rows