Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS003166
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 9
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003166/ScoringFiles/PGS003166.txt.gz
PGS003167
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 9,805
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003167/ScoringFiles/PGS003167.txt.gz
PGS003168
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 1,100,788
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003168/ScoringFiles/PGS003168.txt.gz
PGS003169
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_LASSOSUM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 291,530
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003169/ScoringFiles/PGS003169.txt.gz
PGS003170
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 2,232
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003170/ScoringFiles/PGS003170.txt.gz
PGS003171
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 2,232
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003171/ScoringFiles/PGS003171.txt.gz
PGS003172
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 5,880
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003172/ScoringFiles/PGS003172.txt.gz
PGS003173
(ExPRSweb_VitB12_Wood-et-al-2013-1000G_PRSCS_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin B12 vitamin B12 measurement 1,101,425
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003173/ScoringFiles/PGS003173.txt.gz
PGS001305
(GBE_HC608)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Vitamin B12 deficiency induced anemia (time-to-event) vitamin B12 deficiency,
anemia		 121
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001305/ScoringFiles/PGS001305.txt.gz
PGS001045
(GBE_BIN_FC6006155)
 PGP000244 |
Tanigawa Y et al. PLoS Genet (2022)
 Vitamin B9 intake vitamin supplement exposure measurement 5
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001045/ScoringFiles/PGS001045.txt.gz
PGS001982
(portability-PLR_log_vitaminD)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 35,123
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS001982/ScoringFiles/PGS001982.txt.gz
PGS002200
(portability-ldpred2_log_vitaminD)
 PGP000263 |
Privé F et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 567,735
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002200/ScoringFiles/PGS002200.txt.gz
PGS002355
(biochemistry_VitaminD.BOLT-LMM)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 1,109,311
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002355/ScoringFiles/PGS002355.txt.gz
PGS002427
(biochemistry_VitaminD.P+T.0.0001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 4,821
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002427/ScoringFiles/PGS002427.txt.gz
PGS002476
(biochemistry_VitaminD.P+T.0.001)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 16,848
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002476/ScoringFiles/PGS002476.txt.gz
PGS002525
(biochemistry_VitaminD.P+T.0.01)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 99,894
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002525/ScoringFiles/PGS002525.txt.gz
PGS002574
(biochemistry_VitaminD.P+T.1e-06)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 1,677
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002574/ScoringFiles/PGS002574.txt.gz
PGS002623
(biochemistry_VitaminD.P+T.5e-08)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 1,183
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002623/ScoringFiles/PGS002623.txt.gz
PGS002672
(biochemistry_VitaminD.PolyFun-pred)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 330,506
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002672/ScoringFiles/PGS002672.txt.gz
PGS002721
(biochemistry_VitaminD.SBayesR)
 PGP000332 |
Weissbrod O et al. Nat Genet (2022)
 Vitamin D vitamin D amount 981,998
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002721/ScoringFiles/PGS002721.txt.gz
PGS003174
(ExPRSweb_VitD_100021-irnt_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 312,224
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003174/ScoringFiles/PGS003174.txt.gz
PGS003175
(ExPRSweb_VitD_100021-irnt_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 11
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003175/ScoringFiles/PGS003175.txt.gz
PGS003176
(ExPRSweb_VitD_100021-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 19
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003176/ScoringFiles/PGS003176.txt.gz
PGS003177
(ExPRSweb_VitD_100021-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 10,318,270
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003177/ScoringFiles/PGS003177.txt.gz
PGS003178
(ExPRSweb_VitD_100021-irnt_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 1,113,819
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003178/ScoringFiles/PGS003178.txt.gz
PGS003179
(ExPRSweb_VitD_100021-raw_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 310,479
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003179/ScoringFiles/PGS003179.txt.gz
PGS003180
(ExPRSweb_VitD_100021-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 5
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003180/ScoringFiles/PGS003180.txt.gz
PGS003181
(ExPRSweb_VitD_100021-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 15
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003181/ScoringFiles/PGS003181.txt.gz
PGS003182
(ExPRSweb_VitD_100021-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 10,318,270
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003182/ScoringFiles/PGS003182.txt.gz
PGS003183
(ExPRSweb_VitD_100021-raw_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 1,113,819
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003183/ScoringFiles/PGS003183.txt.gz
PGS003184
(ExPRSweb_VitD_29343764-GCST005367_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 108,547
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003184/ScoringFiles/PGS003184.txt.gz
PGS003185
(ExPRSweb_VitD_29343764-GCST005367_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 16
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003185/ScoringFiles/PGS003185.txt.gz
PGS003186
(ExPRSweb_VitD_29343764-GCST005367_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 15
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003186/ScoringFiles/PGS003186.txt.gz
PGS003187
(ExPRSweb_VitD_29343764-GCST005367_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 98,135
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003187/ScoringFiles/PGS003187.txt.gz
PGS003188
(ExPRSweb_VitD_29343764-GCST005367_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 1,058,027
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003188/ScoringFiles/PGS003188.txt.gz
PGS003189
(ExPRSweb_VitD_30890-irnt_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 547,654
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003189/ScoringFiles/PGS003189.txt.gz
PGS003190
(ExPRSweb_VitD_30890-irnt_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 495
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003190/ScoringFiles/PGS003190.txt.gz
PGS003191
(ExPRSweb_VitD_30890-irnt_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 605
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003191/ScoringFiles/PGS003191.txt.gz
PGS003192
(ExPRSweb_VitD_30890-irnt_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 10,313,259
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003192/ScoringFiles/PGS003192.txt.gz
PGS003193
(ExPRSweb_VitD_30890-irnt_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003193/ScoringFiles/PGS003193.txt.gz
PGS003194
(ExPRSweb_VitD_30890-raw_LASSOSUM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 548,161
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003194/ScoringFiles/PGS003194.txt.gz
PGS003195
(ExPRSweb_VitD_30890-raw_PT_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 404
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003195/ScoringFiles/PGS003195.txt.gz
PGS003196
(ExPRSweb_VitD_30890-raw_PLINK_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 500
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003196/ScoringFiles/PGS003196.txt.gz
PGS003197
(ExPRSweb_VitD_30890-raw_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 10,313,258
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003197/ScoringFiles/PGS003197.txt.gz
PGS003198
(ExPRSweb_VitD_30890-raw_PRSCS_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 1,113,831
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003198/ScoringFiles/PGS003198.txt.gz
PGS003199
(ExPRSweb_VitD_29343764-GCST005367_LASSOSUM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 109,290
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003199/ScoringFiles/PGS003199.txt.gz
PGS003200
(ExPRSweb_VitD_29343764-GCST005367_PT_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 23
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003200/ScoringFiles/PGS003200.txt.gz
PGS003201
(ExPRSweb_VitD_29343764-GCST005367_PLINK_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 22
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003201/ScoringFiles/PGS003201.txt.gz
PGS003202
(ExPRSweb_VitD_29343764-GCST005367_DBSLMM_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 805,427
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003202/ScoringFiles/PGS003202.txt.gz
PGS003203
(ExPRSweb_VitD_29343764-GCST005367_PRSCS_UKB_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Vitamin D vitamin D amount 1,058,756
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003203/ScoringFiles/PGS003203.txt.gz
Showing 4751 to 4800 of 5134 rows