Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS004659
(logTG_EAS_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Log triglycerides triglyceride measurement 1,722,077
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004659/ScoringFiles/PGS004659.txt.gz
PGS004669
(TC_AFR_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,728,954
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004669/ScoringFiles/PGS004669.txt.gz
PGS004674
(TC_EAS_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,728,954
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004674/ScoringFiles/PGS004674.txt.gz
PGS004679
(TC_SAS_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,728,954
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004679/ScoringFiles/PGS004679.txt.gz
PGS004629
(HDL_EAS_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,731,178
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004629/ScoringFiles/PGS004629.txt.gz
PGS004634
(HDL_SAS_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,731,178
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004634/ScoringFiles/PGS004634.txt.gz
PGS000018
(metaGRS_CAD)
 PGP000007 |
Inouye M et al. J Am Coll Cardiol (2018)
 Coronary artery disease coronary artery disease 1,745,179
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000018/ScoringFiles/PGS000018.txt.gz
PGS000907
(PRS_MDD)
 PGP000238 |
Campos AI et al. Commun Med (Lond) (2021)
 Major depressive disorder major depressive disorder 1,773,528
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000907/ScoringFiles/PGS000907.txt.gz
PGS004654
(logTG_AFR_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Log triglycerides triglyceride measurement 1,775,011
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004654/ScoringFiles/PGS004654.txt.gz
PGS004664
(logTG_SAS_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Log triglycerides triglyceride measurement 1,775,011
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004664/ScoringFiles/PGS004664.txt.gz
PGS004813
(Platelets_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Platelet count platelet count 1,793,041
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004813/ScoringFiles/PGS004813.txt.gz
PGS004639
(LDL_AFR_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,794,429
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004639/ScoringFiles/PGS004639.txt.gz
PGS004649
(LDL_SAS_PROSPER)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,794,429
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004649/ScoringFiles/PGS004649.txt.gz
PGS004790
(hypothyroid_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Hypothyroidism hypothyroidism 1,841,655
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004790/ScoringFiles/PGS004790.txt.gz
PGS002977
(ExPRSweb_Height_GIANT-Yang2012-height_DBSLMM_MGI_20211120)
 PGP000393 |
Ma Y et al. Am J Hum Genet (2022)
 Height body height 1,851,736
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002977/ScoringFiles/PGS002977.txt.gz
PGS004626
(HDL_AFR_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,871,796
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004626/ScoringFiles/PGS004626.txt.gz
PGS004631
(HDL_EAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,871,796
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004631/ScoringFiles/PGS004631.txt.gz
PGS004636
(HDL_SAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 HDL cholesterol high density lipoprotein cholesterol measurement 1,871,796
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004636/ScoringFiles/PGS004636.txt.gz
PGS004671
(TC_AFR_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,872,229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004671/ScoringFiles/PGS004671.txt.gz
PGS004676
(TC_EAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,872,229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004676/ScoringFiles/PGS004676.txt.gz
PGS004681
(TC_SAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Total cholesterol total cholesterol measurement 1,872,229
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004681/ScoringFiles/PGS004681.txt.gz
PGS004822
(RBC_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Red blood cell count erythrocyte count 1,874,761
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004822/ScoringFiles/PGS004822.txt.gz
PGS004810
(osteoporosis_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Osteoporosis osteoporosis 1,876,917
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004810/ScoringFiles/PGS004810.txt.gz
PGS004808
(Neutrophils_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Neutrophil count neutrophil count 1,877,161
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004808/ScoringFiles/PGS004808.txt.gz
PGS004641
(LDL_AFR_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,879,609
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004641/ScoringFiles/PGS004641.txt.gz
PGS004646
(LDL_EAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,879,609
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004646/ScoringFiles/PGS004646.txt.gz
PGS004651
(LDL_SAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 LDL cholesterol low density lipoprotein cholesterol measurement 1,879,609
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004651/ScoringFiles/PGS004651.txt.gz
PGS004656
(logTG_AFR_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Log triglycerides triglyceride measurement 1,880,060
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004656/ScoringFiles/PGS004656.txt.gz
PGS004661
(logTG_EAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Log triglycerides triglyceride measurement 1,880,060
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004661/ScoringFiles/PGS004661.txt.gz
PGS004666
(logTG_SAS_weighted_ldpred2)
 PGP000595 |
Zhang J et al. Nat Commun (2024)
 Log triglycerides triglyceride measurement 1,880,060
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004666/ScoringFiles/PGS004666.txt.gz
PGS004733
(bmi_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Body mass index (BMI) body mass index 1,915,187
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004733/ScoringFiles/PGS004733.txt.gz
PGS000921
(PRS_BMI)
 PGP000243 |
Borisevich D et al. PLoS One (2021)
 Body mass index (BMI) body mass index 1,947,711
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000921/ScoringFiles/PGS000921.txt.gz
PGS000728
(CKD_PGS)
 PGP000137 |
Ritchie SC et al. Nat Metab (2021)
 Chronic kidney disease chronic kidney disease 1,958,860
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000728/ScoringFiles/PGS000728.txt.gz
PGS000729
(T2D_PGS)
 PGP000137 |
Ritchie SC et al. Nat Metab (2021)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 2,017,388
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000729/ScoringFiles/PGS000729.txt.gz
PGS004708
(Albumin_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Albumin serum albumin amount 2,071,924
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004708/ScoringFiles/PGS004708.txt.gz
PGS004710
(Albumin_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Albumin serum albumin amount 2,071,924
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004710/ScoringFiles/PGS004710.txt.gz
PGS000027
(GPS_BMI)
 PGP000017 |
Khera AV et al. Cell (2019)
 Body mass index (BMI) body mass index 2,100,302
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000027/ScoringFiles/PGS000027.txt.gz - Check Terms/Licenses
PGS004943
(ICH_MetaPRS)
 PGP000668 |
China Kadoorie Biobank Collaborative Group. et al. Nat Hum Behav (2024)
 Intracerebral hemorrhage intracerebral hemorrhage 2,124,631
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004943/ScoringFiles/PGS004943.txt.gz
PGS004760
(depression_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Depression major depressive disorder 2,141,267
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004760/ScoringFiles/PGS004760.txt.gz
PGS004849
(Total_protein_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Total protein measurement total blood protein measurement 2,167,123
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004849/ScoringFiles/PGS004849.txt.gz
PGS000644
(PRSWEB_PHECODE202.21_C-FOLLICULAR-LYMPHOMA_LASSOSUM_MGI_20200608)
 PGP000118 |
Fritsche LG et al. Am J Hum Genet (2020)
 Nodular lymphoma follicular lymphoma 2,209,179
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000644/ScoringFiles/PGS000644.txt.gz
PGS000727
(AF_PGS)
 PGP000137 |
Ritchie SC et al. Nat Metab (2021)
 Atrial fibrillation atrial fibrillation 2,210,336
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000727/ScoringFiles/PGS000727.txt.gz
PGS004835
(stroke_PRSmix_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Stroke stroke 2,263,784
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004835/ScoringFiles/PGS004835.txt.gz
PGS004854
(VTE_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Venous thromboembolism venous thromboembolism 2,268,993
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004854/ScoringFiles/PGS004854.txt.gz
PGS004716
(ALT_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alanine aminotransferase serum alanine aminotransferase measurement 2,283,693
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004716/ScoringFiles/PGS004716.txt.gz
PGS004718
(ALT_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Alanine aminotransferase serum alanine aminotransferase measurement 2,283,693
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004718/ScoringFiles/PGS004718.txt.gz
PGS003356
(1MH_CAD_PRS_2022_Ldpred)
 PGP000409 |
Aragam KG et al. Nat Genet (2022)
 Coronary artery disease coronary artery disease 2,324,683
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003356/ScoringFiles/PGS003356.txt.gz
PGS004724
(asthma_PRSmix_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 2,342,250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004724/ScoringFiles/PGS004724.txt.gz
PGS004726
(asthma_PRSmixPlus_sas)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Asthma asthma 2,342,250
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004726/ScoringFiles/PGS004726.txt.gz
PGS004819
(RA_PRSmixPlus_eur)
 PGP000604 |
Truong B et al. Cell Genom (2024)
 Rheumatoid Arthritis rheumatoid arthritis 2,624,228
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS004819/ScoringFiles/PGS004819.txt.gz
Showing 4851 to 4900 of 5088 rows